RNA–Protein interactions for RNA: ENST00000383463.8

HMCES-201, Transcript of 5-hydroxymethylcytosine binding, ES cell specific, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMCES, Length 2,515 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCES-201ENST00000383463 CARMIL1Q5VZK9 1371 aa28.62■■■□□ 2.17
HMCES-201ENST00000383463 MIER1Q8N108 512 aa28.62■■■□□ 2.17
HMCES-201ENST00000383463 GTF3C3Q9Y5Q9 886 aa28.61■■■□□ 2.17
HMCES-201ENST00000383463 TARBP1Q13395 1621 aaKnown RBP28.55■■■□□ 2.16
HMCES-201ENST00000383463 CCNB3Q8WWL7 1395 aa28.54■■■□□ 2.16
HMCES-201ENST00000383463 YTHDC1Q96MU7 727 aaKnown RBP28.54■■■□□ 2.16
HMCES-201ENST00000383463 TDRD9Q8NDG6 1382 aaKnown RBP28.53■■■□□ 2.16
HMCES-201ENST00000383463 WDR62O43379 1518 aa28.53■■■□□ 2.16
HMCES-201ENST00000383463 CLSPNQ9HAW4 1339 aa28.52■■■□□ 2.16
HMCES-201ENST00000383463 ERCC6Q03468 1493 aa28.52■■■□□ 2.16
HMCES-201ENST00000383463 ABCA5Q8WWZ7 1642 aa28.51■■■□□ 2.15
HMCES-201ENST00000383463 ITGAEP38570 1179 aa28.5■■■□□ 2.15
HMCES-201ENST00000383463 GAPVD1Q14C86 1478 aa28.48■■■□□ 2.15
HMCES-201ENST00000383463 TIAM1Q13009 1591 aa28.44■■■□□ 2.14
HMCES-201ENST00000383463 CUL7Q14999 1698 aa28.44■■■□□ 2.14
HMCES-201ENST00000383463 P3H3Q8IVL6 736 aa28.4■■■□□ 2.14
HMCES-201ENST00000383463 THOC2Q8NI27 1593 aaKnown RBP28.39■■■□□ 2.13
HMCES-201ENST00000383463 IFT140Q96RY7 1462 aa28.38■■■□□ 2.13
HMCES-201ENST00000383463 MAP3K1Q13233 1512 aa28.36■■■□□ 2.13
HMCES-201ENST00000383463 PELP1Q8IZL8 1130 aaKnown RBP28.34■■■□□ 2.13
HMCES-201ENST00000383463 LRRC9Q6ZRR7 1453 aa28.34■■■□□ 2.13
HMCES-201ENST00000383463 PHLDB1Q86UU1 1377 aa28.31■■■□□ 2.12
HMCES-201ENST00000383463 AQRO60306 1485 aaKnown RBP eCLIP28.31■■■□□ 2.122e-6■■■■■ 26.8
HMCES-201ENST00000383463 RAB3GAP2Q9H2M9 1393 aa28.3■■■□□ 2.12
HMCES-201ENST00000383463 PCF11O94913 1555 aaKnown RBP28.28■■■□□ 2.12
HMCES-201ENST00000383463 ATP1B4Q9UN42 357 aaPredicted RBP28.27■■■□□ 2.12
HMCES-201ENST00000383463 FHAD1B1AJZ9 1412 aa28.26■■■□□ 2.11
HMCES-201ENST00000383463 FHOD3Q2V2M9 1422 aa28.26■■■□□ 2.11
HMCES-201ENST00000383463 ZNF608Q9ULD9 1512 aaPredicted RBP28.26■■■□□ 2.11
HMCES-201ENST00000383463 PBRM1Q86U86 1689 aa28.22■■■□□ 2.11
HMCES-201ENST00000383463 GRIN2BQ13224 1484 aa28.22■■■□□ 2.11
HMCES-201ENST00000383463 CFAP43Q8NDM7 1665 aa28.2■■■□□ 2.11
HMCES-201ENST00000383463 FAM50AQ14320 339 aaKnown RBP28.2■■■□□ 2.1
HMCES-201ENST00000383463 MAPKBP1O60336 1514 aa28.19■■■□□ 2.1
HMCES-201ENST00000383463 SETD5Q9C0A6 1442 aa28.16■■■□□ 2.1
HMCES-201ENST00000383463 CTTNBP2Q8WZ74 1663 aa28.12■■■□□ 2.09
HMCES-201ENST00000383463 ADAMTS12P58397 1594 aa28.12■■■□□ 2.09
HMCES-201ENST00000383463 EIF4G3O43432 1585 aaKnown RBP28.1■■■□□ 2.09
HMCES-201ENST00000383463 EFCAB5A4FU69 1503 aa28.09■■■□□ 2.09
HMCES-201ENST00000383463 FYCO1Q9BQS8 1478 aa28.09■■■□□ 2.09
HMCES-201ENST00000383463 CASKIN1Q8WXD9 1431 aa28.08■■■□□ 2.09
HMCES-201ENST00000383463 SIN3AQ96ST3 1273 aa28.02■■■□□ 2.08
HMCES-201ENST00000383463 SNAPC4Q5SXM2 1469 aa28■■■□□ 2.07
HMCES-201ENST00000383463 MAGI1Q96QZ7 1491 aaPredicted RBP27.95■■■□□ 2.06
HMCES-201ENST00000383463 FMN1Q68DA7 1419 aa27.94■■■□□ 2.06
HMCES-201ENST00000383463 SAMD9Q5K651 1589 aa27.9■■■□□ 2.06
HMCES-201ENST00000383463 FGD6Q6ZV73 1430 aa27.88■■■□□ 2.05
HMCES-201ENST00000383463 GRIN2AQ12879 1464 aa27.88■■■□□ 2.05
HMCES-201ENST00000383463 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.87■■■□□ 2.05
HMCES-201ENST00000383463 LRRIQ1Q96JM4 1722 aa27.86■■■□□ 2.05
HMCES-201ENST00000383463 MTUS2Q5JR59 1369 aa27.86■■■□□ 2.05
HMCES-201ENST00000383463 IQGAP2Q13576 1575 aa27.85■■■□□ 2.05
HMCES-201ENST00000383463 SYNJ2O15056 1496 aa27.85■■■□□ 2.05
HMCES-201ENST00000383463 PTPRKQ15262 1439 aa27.81■■■□□ 2.04
HMCES-201ENST00000383463 CHMP7Q8WUX9 453 aaPredicted RBP27.81■■■□□ 2.04
HMCES-201ENST00000383463 KIAA0586Q9BVV6 1533 aa27.8■■■□□ 2.04
HMCES-201ENST00000383463 KCNH8Q96L42 1107 aa27.79■■■□□ 2.04
HMCES-201ENST00000383463 UGGT2Q9NYU1 1516 aa27.75■■■□□ 2.03
HMCES-201ENST00000383463 NCOA2Q15596 1464 aa27.75■■■□□ 2.03
HMCES-201ENST00000383463 DDX10Q13206 875 aaKnown RBP27.72■■■□□ 2.03
HMCES-201ENST00000383463 HIRIP3Q9BW71 556 aaPredicted RBP27.72■■■□□ 2.03
HMCES-201ENST00000383463 CCDC18Q5T9S5 1454 aa27.72■■■□□ 2.03
HMCES-201ENST00000383463 PPP1R15AO75807 674 aaPredicted RBP27.71■■■□□ 2.03
HMCES-201ENST00000383463 FBLN2P98095 1184 aa27.71■■■□□ 2.03
HMCES-201ENST00000383463 TIMELESSQ9UNS1 1208 aa27.7■■■□□ 2.03
HMCES-201ENST00000383463 MYOM3Q5VTT5 1437 aa27.7■■■□□ 2.02
HMCES-201ENST00000383463 CEP170Q5SW79 1584 aa27.69■■■□□ 2.02
HMCES-201ENST00000383463 HFM1A2PYH4 1435 aa27.68■■■□□ 2.02
HMCES-201ENST00000383463 NUP160Q12769 1436 aa27.68■■■□□ 2.02
HMCES-201ENST00000383463 MAGI3Q5TCQ9 1506 aa27.67■■■□□ 2.02
HMCES-201ENST00000383463 PTPN23Q9H3S7 1636 aa27.66■■■□□ 2.02
HMCES-201ENST00000383463 SUPT6HQ7KZ85 1726 aaKnown RBP27.64■■■□□ 2.02
HMCES-201ENST00000383463 NAIPQ13075 1403 aa27.63■■■□□ 2.01
HMCES-201ENST00000383463 EHBP1L1Q8N3D4 1523 aa27.63■■■□□ 2.01
HMCES-201ENST00000383463 DISP1Q96F81 1524 aa27.62■■■□□ 2.01
HMCES-201ENST00000383463 UACAQ9BZF9 1416 aa27.61■■■□□ 2.01
HMCES-201ENST00000383463 SUPT16HQ9Y5B9 1047 aaKnown RBP27.59■■■□□ 2.01
HMCES-201ENST00000383463 ARHGEF11O15085 1522 aa27.57■■■□□ 2
HMCES-201ENST00000383463 KIAA0556O60303 1618 aa27.57■■■□□ 2
HMCES-201ENST00000383463 TONSLQ96HA7 1378 aa27.56■■■□□ 2
HMCES-201ENST00000383463 ARID3CA6NKF2 412 aa27.52■■■□□ 2
HMCES-201ENST00000383463 JPH4Q96JJ6 628 aa27.52■■■□□ 2
HMCES-201ENST00000383463 RRP7BPQ9NSQ0 103 aa27.52■■■□□ 2
HMCES-201ENST00000383463 CHIC2Q9UKJ5 165 aa27.52■■■□□ 2
HMCES-201ENST00000383463 HECW1Q76N89 1606 aa27.49■■□□□ 1.99
HMCES-201ENST00000383463 EPRSP07814 1512 aaKnown RBP27.49■■□□□ 1.99
HMCES-201ENST00000383463 CDK13Q14004 1512 aaKnown RBP27.49■■□□□ 1.99
HMCES-201ENST00000383463 TCOF1Q13428 1488 aaKnown RBP27.45■■□□□ 1.98
HMCES-201ENST00000383463 CHD1O14646 1710 aa27.44■■□□□ 1.98
HMCES-201ENST00000383463 CARMIL2Q6F5E8 1435 aa27.43■■□□□ 1.98
HMCES-201ENST00000383463 KDM5BQ9UGL1 1544 aa27.42■■□□□ 1.98
HMCES-201ENST00000383463 KDM6BO15054 1643 aa27.4■■□□□ 1.98
HMCES-201ENST00000383463 DENND4BO75064 1496 aaPredicted RBP27.39■■□□□ 1.98
HMCES-201ENST00000383463 TRIM52Q96A61 297 aa27.36■■□□□ 1.97
HMCES-201ENST00000383463 GCC2Q8IWJ2 1684 aa27.36■■□□□ 1.97
HMCES-201ENST00000383463 ANP32CO43423 234 aa27.34■■□□□ 1.97
HMCES-201ENST00000383463 RAPGEF6Q8TEU7 1601 aa27.32■■□□□ 1.96
HMCES-201ENST00000383463 MIA2Q96PC5 1412 aa27.31■■□□□ 1.96
HMCES-201ENST00000383463 NUP153P49790 1475 aaKnown RBP27.31■■□□□ 1.96
HMCES-201ENST00000383463 CCER2I3L3R5 266 aa27.3■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms