RNA–Protein interactions for RNA: ENST00000381989.3

PARP4-201, Transcript of poly(ADP-ribose) polymerase family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PARP4, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PARP4-201ENST00000381989 ITGAEP38570 1179 aa11.51□□□□□ -0.57
PARP4-201ENST00000381989 CUX2O14529 1486 aa11.51□□□□□ -0.57
PARP4-201ENST00000381989 KANK4Q5T7N3 995 aaPredicted RBP11.49□□□□□ -0.57
PARP4-201ENST00000381989 FBLN2P98095 1184 aa11.48□□□□□ -0.57
PARP4-201ENST00000381989 WDR97A6NE52 1622 aa11.46□□□□□ -0.58
PARP4-201ENST00000381989 RRBP1Q9P2E9 1410 aaKnown RBP11.46□□□□□ -0.58
PARP4-201ENST00000381989 MAPKBP1O60336 1514 aa11.45□□□□□ -0.58
PARP4-201ENST00000381989 BCANQ96GW7 911 aa11.45□□□□□ -0.58
PARP4-201ENST00000381989 STAG3Q9UJ98 1225 aa11.43□□□□□ -0.58
PARP4-201ENST00000381989 FHAD1B1AJZ9 1412 aa11.43□□□□□ -0.58
PARP4-201ENST00000381989 DHX57Q6P158 1386 aaKnown RBP11.43□□□□□ -0.58
PARP4-201ENST00000381989 IGF1RP08069 1367 aa11.41□□□□□ -0.58
PARP4-201ENST00000381989 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
PARP4-201ENST00000381989 CANXP27824 592 aaKnown RBP11.4□□□□□ -0.58
PARP4-201ENST00000381989 CFAP43Q8NDM7 1665 aa11.39□□□□□ -0.59
PARP4-201ENST00000381989 CC2D2AQ9P2K1 1620 aa11.39□□□□□ -0.59
PARP4-201ENST00000381989 TSPY4P0CV99 314 aa11.38□□□□□ -0.59
PARP4-201ENST00000381989 TSPY10P0CW01 314 aa11.38□□□□□ -0.59
PARP4-201ENST00000381989 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.38□□□□□ -0.59
PARP4-201ENST00000381989 DIEXFQ68CQ4 756 aaKnown RBP11.38□□□□□ -0.59
PARP4-201ENST00000381989 TIAM1Q13009 1591 aa11.37□□□□□ -0.59
PARP4-201ENST00000381989 CDCA8Q53HL2 280 aa11.36□□□□□ -0.59
PARP4-201ENST00000381989 FGD5Q6ZNL6 1462 aa11.36□□□□□ -0.59
PARP4-201ENST00000381989 PDS5BQ9NTI5 1447 aa11.36□□□□□ -0.59
PARP4-201ENST00000381989 PCF11O94913 1555 aaKnown RBP11.35□□□□□ -0.59
PARP4-201ENST00000381989 HDGFP51858 240 aaKnown RBP11.34□□□□□ -0.59
PARP4-201ENST00000381989 MAP3K1Q13233 1512 aa11.33□□□□□ -0.6
PARP4-201ENST00000381989 TONSLQ96HA7 1378 aa11.32□□□□□ -0.6
PARP4-201ENST00000381989 CHMP7Q8WUX9 453 aaPredicted RBP11.32□□□□□ -0.6
PARP4-201ENST00000381989 KDM5BQ9UGL1 1544 aa11.32□□□□□ -0.6
PARP4-201ENST00000381989 NESP48681 1621 aa11.32□□□□□ -0.6
PARP4-201ENST00000381989 CARMIL1Q5VZK9 1371 aa11.31□□□□□ -0.6
PARP4-201ENST00000381989 MIER1Q8N108 512 aa11.31□□□□□ -0.6
PARP4-201ENST00000381989 UPF2Q9HAU5 1272 aaKnown RBP11.31□□□□□ -0.6
PARP4-201ENST00000381989 DNAJC5BQ9UF47 199 aa11.3□□□□□ -0.6
PARP4-201ENST00000381989 ANP32BQ92688 251 aaKnown RBP11.29□□□□□ -0.6
PARP4-201ENST00000381989 ABCA5Q8WWZ7 1642 aa11.29□□□□□ -0.6
PARP4-201ENST00000381989 PHLDB1Q86UU1 1377 aa11.29□□□□□ -0.6
PARP4-201ENST00000381989 CHMP4BQ9H444 224 aaKnown RBP11.29□□□□□ -0.6
PARP4-201ENST00000381989 CTTNBP2Q8WZ74 1663 aa11.28□□□□□ -0.6
PARP4-201ENST00000381989 SNAPC4Q5SXM2 1469 aa11.28□□□□□ -0.6
PARP4-201ENST00000381989 RAD54L2Q9Y4B4 1467 aa11.28□□□□□ -0.6
PARP4-201ENST00000381989 DENND4BO75064 1496 aaPredicted RBP11.28□□□□□ -0.6
PARP4-201ENST00000381989 FANCD2Q9BXW9 1451 aa11.27□□□□□ -0.6
PARP4-201ENST00000381989 NPM2Q86SE8 214 aaKnown RBP11.27□□□□□ -0.61
PARP4-201ENST00000381989 POLA1P09884 1462 aaPredicted RBP11.27□□□□□ -0.61
PARP4-201ENST00000381989 EFCAB5A4FU69 1503 aa11.27□□□□□ -0.61
PARP4-201ENST00000381989 SAMD9Q5K651 1589 aa11.27□□□□□ -0.61
PARP4-201ENST00000381989 ABCA10Q8WWZ4 1543 aa11.27□□□□□ -0.61
PARP4-201ENST00000381989 FMN1Q68DA7 1419 aa11.26□□□□□ -0.61
PARP4-201ENST00000381989 LRRC9Q6ZRR7 1453 aa11.26□□□□□ -0.61
PARP4-201ENST00000381989 URB2Q14146 1524 aaKnown RBP11.26□□□□□ -0.61
PARP4-201ENST00000381989 MTUS2Q5JR59 1369 aa11.26□□□□□ -0.61
PARP4-201ENST00000381989 DNMBPQ6XZF7 1577 aa11.26□□□□□ -0.61
PARP4-201ENST00000381989 PLEKHD1A6NEE1 506 aa11.25□□□□□ -0.61
PARP4-201ENST00000381989 MAGI3Q5TCQ9 1506 aa11.25□□□□□ -0.61
PARP4-201ENST00000381989 TOPBP1Q92547 1522 aa11.25□□□□□ -0.61
PARP4-201ENST00000381989 CUL7Q14999 1698 aa11.25□□□□□ -0.61
PARP4-201ENST00000381989 LAMC3Q9Y6N6 1575 aa11.24□□□□□ -0.61
PARP4-201ENST00000381989 PTPRKQ15262 1439 aa11.23□□□□□ -0.61
PARP4-201ENST00000381989 PNNQ9H307 717 aaKnown RBP11.23□□□□□ -0.61
PARP4-201ENST00000381989 CHMP4AQ9BY43 222 aa11.23□□□□□ -0.61
PARP4-201ENST00000381989 TARBP1Q13395 1621 aaKnown RBP11.22□□□□□ -0.61
PARP4-201ENST00000381989 TIMELESSQ9UNS1 1208 aa11.22□□□□□ -0.61
PARP4-201ENST00000381989 CCNB3Q8WWL7 1395 aa11.22□□□□□ -0.61
PARP4-201ENST00000381989 GTF3C3Q9Y5Q9 886 aa11.22□□□□□ -0.61
PARP4-201ENST00000381989 ZNF777Q9ULD5 760 aaPredicted RBP11.21□□□□□ -0.61
PARP4-201ENST00000381989 ERCC6Q03468 1493 aa11.21□□□□□ -0.61
PARP4-201ENST00000381989 KIF21AQ7Z4S6 1674 aa11.21□□□□□ -0.61
PARP4-201ENST00000381989 EIF4G2P78344 907 aaKnown RBP eCLIP11.2□□□□□ -0.62
PARP4-201ENST00000381989 ANP32EQ9BTT0 268 aa11.2□□□□□ -0.62
PARP4-201ENST00000381989 ARHGEF11O15085 1522 aa11.2□□□□□ -0.62
PARP4-201ENST00000381989 MYH16Q9H6N6 1097 aa11.2□□□□□ -0.62
PARP4-201ENST00000381989 KANK1Q14678 1352 aa11.19□□□□□ -0.62
PARP4-201ENST00000381989 ZNF326Q5BKZ1 582 aaKnown RBP11.19□□□□□ -0.62
PARP4-201ENST00000381989 ANP32AP39687 249 aaKnown RBP11.19□□□□□ -0.62
PARP4-201ENST00000381989 CFAP44Q96MT7 982 aa11.19□□□□□ -0.62
PARP4-201ENST00000381989 KDM6BO15054 1643 aa11.18□□□□□ -0.62
PARP4-201ENST00000381989 CFAP53Q96M91 514 aa11.18□□□□□ -0.62
PARP4-201ENST00000381989 HAP1P54257 671 aaPredicted RBP11.17□□□□□ -0.62
PARP4-201ENST00000381989 RAB3GAP2Q9H2M9 1393 aa11.17□□□□□ -0.62
PARP4-201ENST00000381989 AQRO60306 1485 aaKnown RBP eCLIP11.16□□□□□ -0.622e-6■■■□□ 18.3
PARP4-201ENST00000381989 MS4A1P11836 297 aa11.15□□□□□ -0.62
PARP4-201ENST00000381989 KCNH8Q96L42 1107 aa11.15□□□□□ -0.62
PARP4-201ENST00000381989 FYCO1Q9BQS8 1478 aa11.15□□□□□ -0.62
PARP4-201ENST00000381989 CDK11BP21127 795 aaKnown RBP11.15□□□□□ -0.62
PARP4-201ENST00000381989 WDR43Q15061 677 aaKnown RBP eCLIP11.15□□□□□ -0.62
PARP4-201ENST00000381989 CCDC18Q5T9S5 1454 aa11.15□□□□□ -0.63
PARP4-201ENST00000381989 CARMIL2Q6F5E8 1435 aa11.15□□□□□ -0.63
PARP4-201ENST00000381989 PPP1R15AO75807 674 aaPredicted RBP11.14□□□□□ -0.63
PARP4-201ENST00000381989 FHOD3Q2V2M9 1422 aa11.14□□□□□ -0.63
PARP4-201ENST00000381989 GRIN2BQ13224 1484 aa11.13□□□□□ -0.63
PARP4-201ENST00000381989 SETD5Q9C0A6 1442 aa11.13□□□□□ -0.63
PARP4-201ENST00000381989 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
PARP4-201ENST00000381989 CASKIN1Q8WXD9 1431 aa11.1□□□□□ -0.63
PARP4-201ENST00000381989 ARID4BQ4LE39 1312 aaPredicted RBP11.1□□□□□ -0.63
PARP4-201ENST00000381989 ANO8Q9HCE9 1232 aaPredicted RBP11.09□□□□□ -0.63
PARP4-201ENST00000381989 PBRM1Q86U86 1689 aa11.09□□□□□ -0.63
PARP4-201ENST00000381989 PTPN23Q9H3S7 1636 aa11.08□□□□□ -0.64
PARP4-201ENST00000381989 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms