RNA–Protein interactions for RNA: ENST00000381728.5

RCL1-201, Transcript of RNA terminal phosphate cyclase like 1, humanhuman

TSL 3 BASIC

Gene RCL1, Length 758 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1-201ENST00000381728 GAPVD1Q14C86 1478 aa14.43□□□□□ -0.1
RCL1-201ENST00000381728 GRIN2BQ13224 1484 aa14.42□□□□□ -0.1
RCL1-201ENST00000381728 MAGI1Q96QZ7 1491 aaPredicted RBP14.4□□□□□ -0.1
RCL1-201ENST00000381728 CUL7Q14999 1698 aa14.39□□□□□ -0.11
RCL1-201ENST00000381728 AQRO60306 1485 aaKnown RBP eCLIP14.39□□□□□ -0.117e-7■■■■■ 29.6
RCL1-201ENST00000381728 CLASP1Q7Z460 1538 aa14.38□□□□□ -0.11
RCL1-201ENST00000381728 MAPK8IP2Q13387 824 aaPredicted RBP14.37□□□□□ -0.11
RCL1-201ENST00000381728 PBRM1Q86U86 1689 aa14.36□□□□□ -0.11
RCL1-201ENST00000381728 TDRD9Q8NDG6 1382 aaKnown RBP14.34□□□□□ -0.11
RCL1-201ENST00000381728 IGF1RP08069 1367 aa14.34□□□□□ -0.11
RCL1-201ENST00000381728 FHAD1B1AJZ9 1412 aa14.32□□□□□ -0.12
RCL1-201ENST00000381728 FBLN2P98095 1184 aa14.31□□□□□ -0.12
RCL1-201ENST00000381728 SYNJ2O15056 1496 aa14.3□□□□□ -0.12
RCL1-201ENST00000381728 SNAPC4Q5SXM2 1469 aa14.29□□□□□ -0.12
RCL1-201ENST00000381728 PRXQ9BXM0 1461 aa14.29□□□□□ -0.12
RCL1-201ENST00000381728 ADAMTS12P58397 1594 aa14.28□□□□□ -0.12
RCL1-201ENST00000381728 KIF21BO75037 1637 aa14.27□□□□□ -0.12
RCL1-201ENST00000381728 CARMIL1Q5VZK9 1371 aa14.26□□□□□ -0.13
RCL1-201ENST00000381728 RAPGEF2Q9Y4G8 1499 aa14.25□□□□□ -0.13
RCL1-201ENST00000381728 POTEDQ86YR6 584 aa14.25□□□□□ -0.13
RCL1-201ENST00000381728 FOXD4L1Q9NU39 408 aa14.25□□□□□ -0.13
RCL1-201ENST00000381728 RNF216Q9NWF9 866 aaPredicted RBP14.23□□□□□ -0.13
RCL1-201ENST00000381728 RUSC2Q8N2Y8 1516 aa14.22□□□□□ -0.13
RCL1-201ENST00000381728 GRIN2AQ12879 1464 aa14.2□□□□□ -0.14
RCL1-201ENST00000381728 CHMP7Q8WUX9 453 aaPredicted RBP14.18□□□□□ -0.14
RCL1-201ENST00000381728 GOLGA3Q08378 1498 aa14.18□□□□□ -0.14
RCL1-201ENST00000381728 KIF13AQ9H1H9 1805 aa14.18□□□□□ -0.14
RCL1-201ENST00000381728 NUP160Q12769 1436 aa14.16□□□□□ -0.14
RCL1-201ENST00000381728 ERCC6L2Q5T890 1561 aa14.13□□□□□ -0.15
RCL1-201ENST00000381728 KIAA0586Q9BVV6 1533 aa14.13□□□□□ -0.15
RCL1-201ENST00000381728 CTTNBP2Q8WZ74 1663 aa14.1□□□□□ -0.15
RCL1-201ENST00000381728 TNIKQ9UKE5 1360 aa14.08□□□□□ -0.16
RCL1-201ENST00000381728 IQGAP2Q13576 1575 aa14.05□□□□□ -0.16
RCL1-201ENST00000381728 CEP170Q5SW79 1584 aa14.05□□□□□ -0.16
RCL1-201ENST00000381728 FAM9AQ8IZU1 332 aaPredicted RBP14.04□□□□□ -0.16
RCL1-201ENST00000381728 SHROOM2Q13796 1616 aa14.04□□□□□ -0.16
RCL1-201ENST00000381728 UGGT2Q9NYU1 1516 aa14.03□□□□□ -0.16
RCL1-201ENST00000381728 EFCAB5A4FU69 1503 aa14.02□□□□□ -0.16
RCL1-201ENST00000381728 HOXD11P31277 338 aaPredicted RBP14.02□□□□□ -0.17
RCL1-201ENST00000381728 DMRT2Q9Y5R5 561 aa14.02□□□□□ -0.17
RCL1-201ENST00000381728 UBTFP17480 764 aaKnown RBP13.99□□□□□ -0.17
RCL1-201ENST00000381728 CARMIL2Q6F5E8 1435 aa13.98□□□□□ -0.17
RCL1-201ENST00000381728 JPH4Q96JJ6 628 aa13.96□□□□□ -0.17
RCL1-201ENST00000381728 SAMD9Q5K651 1589 aa13.94□□□□□ -0.18
RCL1-201ENST00000381728 ILDR1Q86SU0 546 aaPredicted RBP13.93□□□□□ -0.18
RCL1-201ENST00000381728 DIP2BQ9P265 1576 aa13.92□□□□□ -0.18
RCL1-201ENST00000381728 KDM6BO15054 1643 aa13.91□□□□□ -0.18
RCL1-201ENST00000381728 SLC4A2P04920 1241 aa13.91□□□□□ -0.18
RCL1-201ENST00000381728 TSPOAP1O95153 1857 aa13.9□□□□□ -0.18
RCL1-201ENST00000381728 KIAA0556O60303 1618 aa13.89□□□□□ -0.19
RCL1-201ENST00000381728 DISP1Q96F81 1524 aa13.88□□□□□ -0.19
RCL1-201ENST00000381728 CLIP1P30622 1438 aa13.88□□□□□ -0.19
RCL1-201ENST00000381728 CEP162Q5TB80 1403 aa13.88□□□□□ -0.19
RCL1-201ENST00000381728 PRG4Q92954 1404 aaPredicted RBP13.88□□□□□ -0.19
RCL1-201ENST00000381728 ABCC10Q5T3U5 1492 aa13.87□□□□□ -0.19
RCL1-201ENST00000381728 FMN1Q68DA7 1419 aa13.87□□□□□ -0.19
RCL1-201ENST00000381728 MAPKBP1O60336 1514 aa13.86□□□□□ -0.19
RCL1-201ENST00000381728 KDM4FA0A1W2PPD8 638 aa13.86□□□□□ -0.19
RCL1-201ENST00000381728 ADCY10Q96PN6 1610 aa13.84□□□□□ -0.19
RCL1-201ENST00000381728 ARHGAP35Q9NRY4 1499 aa13.84□□□□□ -0.19
RCL1-201ENST00000381728 LOC105371045A0A1W2PR82 267 aa13.82□□□□□ -0.2
RCL1-201ENST00000381728 PTPRGP23470 1445 aa13.8□□□□□ -0.2
RCL1-201ENST00000381728 UHRF1BP1LA0JNW5 1464 aa13.8□□□□□ -0.2
RCL1-201ENST00000381728 FAM69CQ0P6D2 419 aa13.79□□□□□ -0.2
RCL1-201ENST00000381728 FYCO1Q9BQS8 1478 aa13.75□□□□□ -0.21
RCL1-201ENST00000381728 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
RCL1-201ENST00000381728 VPS8Q8N3P4 1428 aa13.74□□□□□ -0.21
RCL1-201ENST00000381728 CASKIN1Q8WXD9 1431 aa13.74□□□□□ -0.21
RCL1-201ENST00000381728 PPRC1Q5VV67 1664 aaKnown RBP13.74□□□□□ -0.21
RCL1-201ENST00000381728 ABCA8O94911 1581 aa13.74□□□□□ -0.21
RCL1-201ENST00000381728 MAP3K1Q13233 1512 aa13.74□□□□□ -0.21
RCL1-201ENST00000381728 UACAQ9BZF9 1416 aa13.73□□□□□ -0.21
RCL1-201ENST00000381728 ADGRL1O94910 1474 aa13.73□□□□□ -0.21
RCL1-201ENST00000381728 ABCC2Q92887 1545 aa13.72□□□□□ -0.21
RCL1-201ENST00000381728 CCDC18Q5T9S5 1454 aa13.72□□□□□ -0.21
RCL1-201ENST00000381728 FHOD3Q2V2M9 1422 aa13.72□□□□□ -0.21
RCL1-201ENST00000381728 HECW1Q76N89 1606 aa13.72□□□□□ -0.21
RCL1-201ENST00000381728 RAPGEF6Q8TEU7 1601 aa13.72□□□□□ -0.21
RCL1-201ENST00000381728 MYCNP04198 464 aaPredicted RBP13.69□□□□□ -0.22
RCL1-201ENST00000381728 ATXN8OSP0DMR3 200 aa13.69□□□□□ -0.22
RCL1-201ENST00000381728 KDM5BQ9UGL1 1544 aa13.68□□□□□ -0.22
RCL1-201ENST00000381728 NPM1P06748 294 aaKnown RBP eCLIP13.66□□□□□ -0.22
RCL1-201ENST00000381728 CDK11AQ9UQ88 783 aaPredicted RBP13.65□□□□□ -0.22
RCL1-201ENST00000381728 NUP153P49790 1475 aaKnown RBP13.63□□□□□ -0.23
RCL1-201ENST00000381728 PLB1Q6P1J6 1458 aa13.63□□□□□ -0.23
RCL1-201ENST00000381728 PCF11O94913 1555 aaKnown RBP13.62□□□□□ -0.23
RCL1-201ENST00000381728 P3H3Q8IVL6 736 aa13.62□□□□□ -0.23
RCL1-201ENST00000381728 EPRSP07814 1512 aaKnown RBP13.62□□□□□ -0.23
RCL1-201ENST00000381728 GLI2P10070 1586 aa13.6□□□□□ -0.23
RCL1-201ENST00000381728 RANGAP1P46060 587 aaPredicted RBP13.6□□□□□ -0.23
RCL1-201ENST00000381728 APLP2Q06481 763 aa13.6□□□□□ -0.23
RCL1-201ENST00000381728 ATP10BO94823 1461 aa13.59□□□□□ -0.23
RCL1-201ENST00000381728 CFAP43Q8NDM7 1665 aa13.59□□□□□ -0.23
RCL1-201ENST00000381728 MAP3K4Q9Y6R4 1608 aa13.57□□□□□ -0.24
RCL1-201ENST00000381728 TIAM1Q13009 1591 aa13.57□□□□□ -0.24
RCL1-201ENST00000381728 ZCCHC11Q5TAX3 1644 aaKnown RBP13.57□□□□□ -0.24
RCL1-201ENST00000381728 COL17A1Q9UMD9 1497 aaPredicted RBP13.55□□□□□ -0.24
RCL1-201ENST00000381728 PLEKHD1A6NEE1 506 aa13.54□□□□□ -0.24
RCL1-201ENST00000381728 ASXL2Q76L83 1435 aa13.54□□□□□ -0.24
RCL1-201ENST00000381728 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms