RNA–Protein interactions for RNA: ENST00000381535.4

SYNGR1-204, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,295 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-204ENST00000381535 RIMBP3BA6NNM3 1639 aa22.93■■□□□ 1.26
SYNGR1-204ENST00000381535 RIMBP3Q9UFD9 1639 aa22.93■■□□□ 1.26
SYNGR1-204ENST00000381535 MAGI1Q96QZ7 1491 aaPredicted RBP22.92■■□□□ 1.26
SYNGR1-204ENST00000381535 PBRM1Q86U86 1689 aa22.9■■□□□ 1.26
SYNGR1-204ENST00000381535 FHAD1B1AJZ9 1412 aa22.9■■□□□ 1.26
SYNGR1-204ENST00000381535 CYB5RLQ6IPT4 315 aa22.89■■□□□ 1.25
SYNGR1-204ENST00000381535 CHD1O14646 1710 aa22.86■■□□□ 1.25
SYNGR1-204ENST00000381535 SYNJ2O15056 1496 aa22.85■■□□□ 1.25
SYNGR1-204ENST00000381535 ADAMTS12P58397 1594 aa22.79■■□□□ 1.24
SYNGR1-204ENST00000381535 CLASP1Q7Z460 1538 aa22.76■■□□□ 1.23
SYNGR1-204ENST00000381535 ARAP1Q96P48 1450 aa22.75■■□□□ 1.23
SYNGR1-204ENST00000381535 ARHGAP35Q9NRY4 1499 aa22.72■■□□□ 1.23
SYNGR1-204ENST00000381535 VPS8Q8N3P4 1428 aa22.71■■□□□ 1.23
SYNGR1-204ENST00000381535 CTTNBP2Q8WZ74 1663 aa22.68■■□□□ 1.22
SYNGR1-204ENST00000381535 PPARGC1BQ86YN6 1023 aaKnown RBP22.67■■□□□ 1.22
SYNGR1-204ENST00000381535 P3H3Q8IVL6 736 aa22.66■■□□□ 1.22
SYNGR1-204ENST00000381535 GRIN2AQ12879 1464 aa22.66■■□□□ 1.22
SYNGR1-204ENST00000381535 APLP2Q06481 763 aa22.62■■□□□ 1.21
SYNGR1-204ENST00000381535 TRIM26Q12899 539 aaPredicted RBP22.61■■□□□ 1.21
SYNGR1-204ENST00000381535 NUP160Q12769 1436 aa22.6■■□□□ 1.21
SYNGR1-204ENST00000381535 EFCAB5A4FU69 1503 aa22.57■■□□□ 1.2
SYNGR1-204ENST00000381535 KIAA0586Q9BVV6 1533 aa22.57■■□□□ 1.2
SYNGR1-204ENST00000381535 PCGF6Q9BYE7 350 aa22.57■■□□□ 1.2
SYNGR1-204ENST00000381535 IQGAP2Q13576 1575 aa22.54■■□□□ 1.2
SYNGR1-204ENST00000381535 FHOD3Q2V2M9 1422 aa22.53■■□□□ 1.2
SYNGR1-204ENST00000381535 TRHP20396 242 aaPredicted RBP22.52■■□□□ 1.2
SYNGR1-204ENST00000381535 CEP170Q5SW79 1584 aa22.5■■□□□ 1.19
SYNGR1-204ENST00000381535 SAMD9Q5K651 1589 aa22.48■■□□□ 1.19
SYNGR1-204ENST00000381535 TTBK1Q5TCY1 1321 aaPredicted RBP22.48■■□□□ 1.19
SYNGR1-204ENST00000381535 JPH4Q96JJ6 628 aa22.47■■□□□ 1.19
SYNGR1-204ENST00000381535 UGGT2Q9NYU1 1516 aa22.47■■□□□ 1.19
SYNGR1-204ENST00000381535 ATP1B4Q9UN42 357 aaPredicted RBP22.44■■□□□ 1.18
SYNGR1-204ENST00000381535 FMN1Q68DA7 1419 aa22.43■■□□□ 1.18
SYNGR1-204ENST00000381535 ERCC6L2Q5T890 1561 aa22.41■■□□□ 1.18
SYNGR1-204ENST00000381535 CASKIN1Q8WXD9 1431 aa22.39■■□□□ 1.17
SYNGR1-204ENST00000381535 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
SYNGR1-204ENST00000381535 KANK4Q5T7N3 995 aaPredicted RBP22.37■■□□□ 1.17
SYNGR1-204ENST00000381535 PRG4Q92954 1404 aaPredicted RBP22.36■■□□□ 1.17
SYNGR1-204ENST00000381535 DISP1Q96F81 1524 aa22.36■■□□□ 1.17
SYNGR1-204ENST00000381535 CARMIL2Q6F5E8 1435 aa22.32■■□□□ 1.16
SYNGR1-204ENST00000381535 MAP3K1Q13233 1512 aa22.32■■□□□ 1.16
SYNGR1-204ENST00000381535 FYCO1Q9BQS8 1478 aa22.32■■□□□ 1.16
SYNGR1-204ENST00000381535 PCF11O94913 1555 aaKnown RBP22.31■■□□□ 1.16
SYNGR1-204ENST00000381535 KIAA0556O60303 1618 aa22.3■■□□□ 1.16
SYNGR1-204ENST00000381535 TIAM1Q13009 1591 aa22.25■■□□□ 1.15
SYNGR1-204ENST00000381535 LRRC9Q6ZRR7 1453 aa22.21■■□□□ 1.15
SYNGR1-204ENST00000381535 CFAP43Q8NDM7 1665 aa22.14■■□□□ 1.14
SYNGR1-204ENST00000381535 HECW1Q76N89 1606 aa22.14■■□□□ 1.14
SYNGR1-204ENST00000381535 PTPRGP23470 1445 aa22.14■■□□□ 1.13
SYNGR1-204ENST00000381535 CCDC18Q5T9S5 1454 aa22.12■■□□□ 1.13
SYNGR1-204ENST00000381535 ARID3CA6NKF2 412 aa22.12■■□□□ 1.13
SYNGR1-204ENST00000381535 NPM1P06748 294 aaKnown RBP eCLIP22.12■■□□□ 1.13
SYNGR1-204ENST00000381535 EPRSP07814 1512 aaKnown RBP22.11■■□□□ 1.13
SYNGR1-204ENST00000381535 MTUS2Q5JR59 1369 aa22.11■■□□□ 1.13
SYNGR1-204ENST00000381535 RAPGEF6Q8TEU7 1601 aa22.09■■□□□ 1.13
SYNGR1-204ENST00000381535 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.08■■□□□ 1.13
SYNGR1-204ENST00000381535 HNRNPUL2Q1KMD3 747 aaKnown RBP22.08■■□□□ 1.13
SYNGR1-204ENST00000381535 LRRIQ1Q96JM4 1722 aa22.08■■□□□ 1.12
SYNGR1-204ENST00000381535 PLB1Q6P1J6 1458 aa22.08■■□□□ 1.12
SYNGR1-204ENST00000381535 NUP153P49790 1475 aaKnown RBP22.06■■□□□ 1.12
SYNGR1-204ENST00000381535 CDK11AQ9UQ88 783 aaPredicted RBP22.05■■□□□ 1.12
SYNGR1-204ENST00000381535 CDK13Q14004 1512 aaKnown RBP22.03■■□□□ 1.12
SYNGR1-204ENST00000381535 ABCA8O94911 1581 aa22.02■■□□□ 1.12
SYNGR1-204ENST00000381535 PHLDB1Q86UU1 1377 aa22.01■■□□□ 1.11
SYNGR1-204ENST00000381535 RRBP1Q9P2E9 1410 aaKnown RBP22.01■■□□□ 1.11
SYNGR1-204ENST00000381535 FAM69CQ0P6D2 419 aa22■■□□□ 1.11
SYNGR1-204ENST00000381535 ABCC10Q5T3U5 1492 aa21.99■■□□□ 1.11
SYNGR1-204ENST00000381535 CCNB3Q8WWL7 1395 aa21.99■■□□□ 1.11
SYNGR1-204ENST00000381535 EHBP1L1Q8N3D4 1523 aa21.98■■□□□ 1.11
SYNGR1-204ENST00000381535 ADCY10Q96PN6 1610 aa21.98■■□□□ 1.11
SYNGR1-204ENST00000381535 UACAQ9BZF9 1416 aa21.97■■□□□ 1.11
SYNGR1-204ENST00000381535 MAPKBP1O60336 1514 aa21.97■■□□□ 1.11
SYNGR1-204ENST00000381535 MAGI3Q5TCQ9 1506 aa21.96■■□□□ 1.11
SYNGR1-204ENST00000381535 PLEKHD1A6NEE1 506 aa21.94■■□□□ 1.1
SYNGR1-204ENST00000381535 ATP10BO94823 1461 aa21.94■■□□□ 1.1
SYNGR1-204ENST00000381535 NCOA2Q15596 1464 aa21.94■■□□□ 1.1
SYNGR1-204ENST00000381535 SUPT6HQ7KZ85 1726 aaKnown RBP21.92■■□□□ 1.1
SYNGR1-204ENST00000381535 FAM50AQ14320 339 aaKnown RBP21.91■■□□□ 1.1
SYNGR1-204ENST00000381535 UHRF1BP1LA0JNW5 1464 aa21.88■■□□□ 1.09
SYNGR1-204ENST00000381535 TROQ12816 1431 aaPredicted RBP21.88■■□□□ 1.09
SYNGR1-204ENST00000381535 ABCC2Q92887 1545 aa21.87■■□□□ 1.09
SYNGR1-204ENST00000381535 ITGAEP38570 1179 aa21.86■■□□□ 1.09
SYNGR1-204ENST00000381535 MYOM3Q5VTT5 1437 aa21.85■■□□□ 1.09
SYNGR1-204ENST00000381535 FGD6Q6ZV73 1430 aa21.85■■□□□ 1.09
SYNGR1-204ENST00000381535 KIF13AQ9H1H9 1805 aa21.85■■□□□ 1.09
SYNGR1-204ENST00000381535 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.84■■□□□ 1.09
SYNGR1-204ENST00000381535 HRCP23327 699 aa21.82■■□□□ 1.08
SYNGR1-204ENST00000381535 DIP2BQ9P265 1576 aa21.82■■□□□ 1.08
SYNGR1-204ENST00000381535 ASXL2Q76L83 1435 aa21.8■■□□□ 1.08
SYNGR1-204ENST00000381535 PHF23Q9BUL5 403 aaPredicted RBP21.78■■□□□ 1.08
SYNGR1-204ENST00000381535 KDM5BQ9UGL1 1544 aa21.78■■□□□ 1.08
SYNGR1-204ENST00000381535 MIA2Q96PC5 1412 aa21.76■■□□□ 1.07
SYNGR1-204ENST00000381535 CCER1Q8TC90 406 aaPredicted RBP21.72■■□□□ 1.07
SYNGR1-204ENST00000381535 CFDP1Q9UEE9 299 aaPredicted RBP21.71■■□□□ 1.07
SYNGR1-204ENST00000381535 PTPN23Q9H3S7 1636 aa21.7■■□□□ 1.06
SYNGR1-204ENST00000381535 TCOF1Q13428 1488 aaKnown RBP21.7■■□□□ 1.06
SYNGR1-204ENST00000381535 KCNH8Q96L42 1107 aa21.69■■□□□ 1.06
SYNGR1-204ENST00000381535 GPATCH8Q9UKJ3 1502 aaKnown RBP21.69■■□□□ 1.06
SYNGR1-204ENST00000381535 KIF14Q15058 1648 aa21.69■■□□□ 1.06
SYNGR1-204ENST00000381535 ZEB1P37275 1124 aaPredicted RBP21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms