RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 CLASP1Q7Z460 1538 aa20.82■□□□□ 0.92
SMN1-202ENST00000380707 KIAA0586Q9BVV6 1533 aa20.77■□□□□ 0.92
SMN1-202ENST00000380707 DNAJC5Q9H3Z4 198 aa20.75■□□□□ 0.91
SMN1-202ENST00000380707 GOLGA3Q08378 1498 aa20.75■□□□□ 0.91
SMN1-202ENST00000380707 UBTFP17480 764 aaKnown RBP20.71■□□□□ 0.91
SMN1-202ENST00000380707 JPH4Q96JJ6 628 aa20.71■□□□□ 0.91
SMN1-202ENST00000380707 IQGAP2Q13576 1575 aa20.7■□□□□ 0.9
SMN1-202ENST00000380707 CTTNBP2Q8WZ74 1663 aa20.7■□□□□ 0.9
SMN1-202ENST00000380707 SHROOM2Q13796 1616 aa20.68■□□□□ 0.9
SMN1-202ENST00000380707 LOC105371045A0A1W2PR82 267 aa20.66■□□□□ 0.9
SMN1-202ENST00000380707 PRG4Q92954 1404 aaPredicted RBP20.63■□□□□ 0.89
SMN1-202ENST00000380707 ARHGEF11O15085 1522 aa20.62■□□□□ 0.89
SMN1-202ENST00000380707 ERCC6L2Q5T890 1561 aa20.61■□□□□ 0.89
SMN1-202ENST00000380707 UGGT2Q9NYU1 1516 aa20.6■□□□□ 0.89
SMN1-202ENST00000380707 RANGAP1P46060 587 aaPredicted RBP20.58■□□□□ 0.89
SMN1-202ENST00000380707 RIMBP3CA6NJZ7 1639 aa20.58■□□□□ 0.88
SMN1-202ENST00000380707 RIMBP3BA6NNM3 1639 aa20.58■□□□□ 0.88
SMN1-202ENST00000380707 RIMBP3Q9UFD9 1639 aa20.58■□□□□ 0.88
SMN1-202ENST00000380707 TNIKQ9UKE5 1360 aa20.57■□□□□ 0.88
SMN1-202ENST00000380707 DISP1Q96F81 1524 aa20.56■□□□□ 0.88
SMN1-202ENST00000380707 CARMIL2Q6F5E8 1435 aa20.53■□□□□ 0.88
SMN1-202ENST00000380707 KIAA0556O60303 1618 aa20.5■□□□□ 0.87
SMN1-202ENST00000380707 ARAP1Q96P48 1450 aa20.49■□□□□ 0.87
SMN1-202ENST00000380707 P3H3Q8IVL6 736 aa20.48■□□□□ 0.87
SMN1-202ENST00000380707 SAMD9Q5K651 1589 aa20.48■□□□□ 0.87
SMN1-202ENST00000380707 CYB5RLQ6IPT4 315 aa20.45■□□□□ 0.86
SMN1-202ENST00000380707 TTBK1Q5TCY1 1321 aaPredicted RBP20.44■□□□□ 0.86
SMN1-202ENST00000380707 EFCAB5A4FU69 1503 aa20.43■□□□□ 0.86
SMN1-202ENST00000380707 ARHGAP35Q9NRY4 1499 aa20.43■□□□□ 0.86
SMN1-202ENST00000380707 PTPRGP23470 1445 aa20.42■□□□□ 0.86
SMN1-202ENST00000380707 CLIP1P30622 1438 aa20.41■□□□□ 0.86
SMN1-202ENST00000380707 CEP162Q5TB80 1403 aa20.41■□□□□ 0.86
SMN1-202ENST00000380707 FHOD3Q2V2M9 1422 aa20.4■□□□□ 0.86
SMN1-202ENST00000380707 PLB1Q6P1J6 1458 aa20.3■□□□□ 0.84
SMN1-202ENST00000380707 UACAQ9BZF9 1416 aa20.29■□□□□ 0.84
SMN1-202ENST00000380707 ADCY10Q96PN6 1610 aa20.26■□□□□ 0.83
SMN1-202ENST00000380707 FMN1Q68DA7 1419 aa20.26■□□□□ 0.83
SMN1-202ENST00000380707 ABCA8O94911 1581 aa20.26■□□□□ 0.83
SMN1-202ENST00000380707 ABCC2Q92887 1545 aa20.24■□□□□ 0.83
SMN1-202ENST00000380707 UHRF1BP1LA0JNW5 1464 aa20.24■□□□□ 0.83
SMN1-202ENST00000380707 RAPGEF6Q8TEU7 1601 aa20.21■□□□□ 0.83
SMN1-202ENST00000380707 NUP153P49790 1475 aaKnown RBP20.17■□□□□ 0.82
SMN1-202ENST00000380707 ARID3CA6NKF2 412 aa20.17■□□□□ 0.82
SMN1-202ENST00000380707 NPM1P06748 294 aaKnown RBP eCLIP20.16■□□□□ 0.82
SMN1-202ENST00000380707 ATP1B4Q9UN42 357 aaPredicted RBP20.16■□□□□ 0.82
SMN1-202ENST00000380707 CASKIN1Q8WXD9 1431 aa20.15■□□□□ 0.82
SMN1-202ENST00000380707 KDM5BQ9UGL1 1544 aa20.15■□□□□ 0.82
SMN1-202ENST00000380707 PCF11O94913 1555 aaKnown RBP20.14■□□□□ 0.81
SMN1-202ENST00000380707 VPS8Q8N3P4 1428 aa20.12■□□□□ 0.81
SMN1-202ENST00000380707 ATP10BO94823 1461 aa20.12■□□□□ 0.81
SMN1-202ENST00000380707 ZCCHC11Q5TAX3 1644 aaKnown RBP20.11■□□□□ 0.81
SMN1-202ENST00000380707 HECW1Q76N89 1606 aa20.11■□□□□ 0.81
SMN1-202ENST00000380707 FYCO1Q9BQS8 1478 aa20.11■□□□□ 0.81
SMN1-202ENST00000380707 EPRSP07814 1512 aaKnown RBP20.08■□□□□ 0.8
SMN1-202ENST00000380707 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.07■□□□□ 0.8
SMN1-202ENST00000380707 HNRNPUL2Q1KMD3 747 aaKnown RBP20.07■□□□□ 0.8
SMN1-202ENST00000380707 CDK13Q14004 1512 aaKnown RBP20.06■□□□□ 0.8
SMN1-202ENST00000380707 LRRIQ1Q96JM4 1722 aa20.05■□□□□ 0.8
SMN1-202ENST00000380707 MAPKBP1O60336 1514 aa20.05■□□□□ 0.8
SMN1-202ENST00000380707 ASXL2Q76L83 1435 aa20.04■□□□□ 0.8
SMN1-202ENST00000380707 SENP3Q9H4L4 574 aaPredicted RBP20.03■□□□□ 0.8
SMN1-202ENST00000380707 CCDC18Q5T9S5 1454 aa20■□□□□ 0.79
SMN1-202ENST00000380707 WDR7Q9Y4E6 1490 aa19.98■□□□□ 0.79
SMN1-202ENST00000380707 PLEKHD1A6NEE1 506 aa19.97■□□□□ 0.79
SMN1-202ENST00000380707 KCNH8Q96L42 1107 aa19.95■□□□□ 0.78
SMN1-202ENST00000380707 CDK11AQ9UQ88 783 aaPredicted RBP19.95■□□□□ 0.78
SMN1-202ENST00000380707 ABCC10Q5T3U5 1492 aa19.92■□□□□ 0.78
SMN1-202ENST00000380707 MAGI3Q5TCQ9 1506 aa19.91■□□□□ 0.78
SMN1-202ENST00000380707 TRHP20396 242 aaPredicted RBP19.91■□□□□ 0.78
SMN1-202ENST00000380707 FAM69CQ0P6D2 419 aa19.91■□□□□ 0.78
SMN1-202ENST00000380707 TIAM1Q13009 1591 aa19.91■□□□□ 0.78
SMN1-202ENST00000380707 DIP2BQ9P265 1576 aa19.89■□□□□ 0.77
SMN1-202ENST00000380707 TROQ12816 1431 aaPredicted RBP19.89■□□□□ 0.77
SMN1-202ENST00000380707 CFAP43Q8NDM7 1665 aa19.89■□□□□ 0.77
SMN1-202ENST00000380707 MAP3K1Q13233 1512 aa19.89■□□□□ 0.77
SMN1-202ENST00000380707 APLP2Q06481 763 aa19.88■□□□□ 0.77
SMN1-202ENST00000380707 KANK4Q5T7N3 995 aaPredicted RBP19.86■□□□□ 0.77
SMN1-202ENST00000380707 MTUS2Q5JR59 1369 aa19.85■□□□□ 0.77
SMN1-202ENST00000380707 KIF13AQ9H1H9 1805 aa19.85■□□□□ 0.77
SMN1-202ENST00000380707 GLI2P10070 1586 aa19.84■□□□□ 0.77
SMN1-202ENST00000380707 LRRC9Q6ZRR7 1453 aa19.84■□□□□ 0.77
SMN1-202ENST00000380707 KIF14Q15058 1648 aa19.82■□□□□ 0.76
SMN1-202ENST00000380707 EHBP1L1Q8N3D4 1523 aa19.8■□□□□ 0.76
SMN1-202ENST00000380707 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.8■□□□□ 0.76
SMN1-202ENST00000380707 ABCA9Q8IUA7 1624 aa19.79■□□□□ 0.76
SMN1-202ENST00000380707 TTC37Q6PGP7 1564 aa19.78■□□□□ 0.76
SMN1-202ENST00000380707 MAP3K4Q9Y6R4 1608 aa19.77■□□□□ 0.76
SMN1-202ENST00000380707 CD109Q6YHK3 1445 aa19.77■□□□□ 0.76
SMN1-202ENST00000380707 PPARGC1BQ86YN6 1023 aaKnown RBP19.75■□□□□ 0.75
SMN1-202ENST00000380707 NCOA2Q15596 1464 aa19.72■□□□□ 0.75
SMN1-202ENST00000380707 SUPT6HQ7KZ85 1726 aaKnown RBP19.72■□□□□ 0.75
SMN1-202ENST00000380707 TSPOAP1O95153 1857 aa19.72■□□□□ 0.75
SMN1-202ENST00000380707 PPRC1Q5VV67 1664 aaKnown RBP19.7■□□□□ 0.74
SMN1-202ENST00000380707 PLCH2O75038 1416 aa19.7■□□□□ 0.74
SMN1-202ENST00000380707 PHF23Q9BUL5 403 aaPredicted RBP19.69■□□□□ 0.74
SMN1-202ENST00000380707 CCNB3Q8WWL7 1395 aa19.68■□□□□ 0.74
SMN1-202ENST00000380707 GPATCH8Q9UKJ3 1502 aaKnown RBP19.68■□□□□ 0.74
SMN1-202ENST00000380707 MYO5CQ9NQX4 1742 aa19.66■□□□□ 0.74
SMN1-202ENST00000380707 CDC42BPAQ5VT25 1732 aa19.66■□□□□ 0.74
SMN1-202ENST00000380707 TEX14Q8IWB6 1497 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 216.5 ms