RNA–Protein interactions for RNA: ENST00000380693.7

MSL3-206, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-206ENST00000380693 PHF23Q9BUL5 403 aaPredicted RBP11.27□□□□□ -0.6
MSL3-206ENST00000380693 LRRC9Q6ZRR7 1453 aa11.27□□□□□ -0.61
MSL3-206ENST00000380693 NESP48681 1621 aa11.27□□□□□ -0.61
MSL3-206ENST00000380693 CENPBP07199 599 aaPredicted RBP11.26□□□□□ -0.61
MSL3-206ENST00000380693 CFAP43Q8NDM7 1665 aa11.25□□□□□ -0.61
MSL3-206ENST00000380693 AQRO60306 1485 aaKnown RBP eCLIP11.25□□□□□ -0.611e-7■■■■□ 19.5
MSL3-206ENST00000380693 WDR97A6NE52 1622 aa11.25□□□□□ -0.61
MSL3-206ENST00000380693 URB2Q14146 1524 aaKnown RBP11.23□□□□□ -0.61
MSL3-206ENST00000380693 NEUROD1Q13562 356 aa11.23□□□□□ -0.61
MSL3-206ENST00000380693 FYCO1Q9BQS8 1478 aa11.23□□□□□ -0.61
MSL3-206ENST00000380693 PCF11O94913 1555 aaKnown RBP11.23□□□□□ -0.61
MSL3-206ENST00000380693 CASKIN1Q8WXD9 1431 aa11.22□□□□□ -0.61
MSL3-206ENST00000380693 CTTNBP2Q8WZ74 1663 aa11.21□□□□□ -0.61
MSL3-206ENST00000380693 PDS5BQ9NTI5 1447 aa11.21□□□□□ -0.61
MSL3-206ENST00000380693 ABCA5Q8WWZ7 1642 aa11.21□□□□□ -0.62
MSL3-206ENST00000380693 PHLDB1Q86UU1 1377 aa11.2□□□□□ -0.62
MSL3-206ENST00000380693 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.19□□□□□ -0.62
MSL3-206ENST00000380693 FHOD3Q2V2M9 1422 aa11.18□□□□□ -0.62
MSL3-206ENST00000380693 FMN1Q68DA7 1419 aa11.18□□□□□ -0.62
MSL3-206ENST00000380693 RAB3GAP2Q9H2M9 1393 aa11.18□□□□□ -0.62
MSL3-206ENST00000380693 GAPVD1Q14C86 1478 aa11.17□□□□□ -0.62
MSL3-206ENST00000380693 SETD5Q9C0A6 1442 aa11.16□□□□□ -0.62
MSL3-206ENST00000380693 MIER1Q8N108 512 aa11.16□□□□□ -0.62
MSL3-206ENST00000380693 SAMD9Q5K651 1589 aa11.15□□□□□ -0.62
MSL3-206ENST00000380693 SNAPC4Q5SXM2 1469 aa11.15□□□□□ -0.62
MSL3-206ENST00000380693 MAPKBP1O60336 1514 aa11.14□□□□□ -0.63
MSL3-206ENST00000380693 P3H3Q8IVL6 736 aa11.13□□□□□ -0.63
MSL3-206ENST00000380693 TDRD9Q8NDG6 1382 aaKnown RBP11.13□□□□□ -0.63
MSL3-206ENST00000380693 THOC2Q8NI27 1593 aaKnown RBP11.12□□□□□ -0.63
MSL3-206ENST00000380693 TARBP1Q13395 1621 aaKnown RBP11.12□□□□□ -0.63
MSL3-206ENST00000380693 PELP1Q8IZL8 1130 aaKnown RBP11.12□□□□□ -0.63
MSL3-206ENST00000380693 ITGAEP38570 1179 aa11.11□□□□□ -0.63
MSL3-206ENST00000380693 KIF21AQ7Z4S6 1674 aa11.11□□□□□ -0.63
MSL3-206ENST00000380693 GTF3C3Q9Y5Q9 886 aa11.1□□□□□ -0.63
MSL3-206ENST00000380693 GRIN2BQ13224 1484 aa11.09□□□□□ -0.63
MSL3-206ENST00000380693 FGD6Q6ZV73 1430 aa11.09□□□□□ -0.63
MSL3-206ENST00000380693 FAM50AQ14320 339 aaKnown RBP11.08□□□□□ -0.64
MSL3-206ENST00000380693 TIMELESSQ9UNS1 1208 aa11.08□□□□□ -0.64
MSL3-206ENST00000380693 DNAJC5BQ9UF47 199 aa11.06□□□□□ -0.64
MSL3-206ENST00000380693 ATP1B4Q9UN42 357 aaPredicted RBP11.06□□□□□ -0.64
MSL3-206ENST00000380693 MTUS2Q5JR59 1369 aa11.06□□□□□ -0.64
MSL3-206ENST00000380693 EHBP1L1Q8N3D4 1523 aa11.04□□□□□ -0.64
MSL3-206ENST00000380693 LRRIQ1Q96JM4 1722 aa11.04□□□□□ -0.64
MSL3-206ENST00000380693 MRC2Q9UBG0 1479 aa11.04□□□□□ -0.64
MSL3-206ENST00000380693 ARHGEF11O15085 1522 aa11.03□□□□□ -0.64
MSL3-206ENST00000380693 CCDC18Q5T9S5 1454 aa11.03□□□□□ -0.64
MSL3-206ENST00000380693 PBRM1Q86U86 1689 aa11.03□□□□□ -0.64
MSL3-206ENST00000380693 HFM1A2PYH4 1435 aa11.03□□□□□ -0.64
MSL3-206ENST00000380693 MYOM3Q5VTT5 1437 aa11.03□□□□□ -0.64
MSL3-206ENST00000380693 NCOA2Q15596 1464 aa11.03□□□□□ -0.64
MSL3-206ENST00000380693 YTHDC1Q96MU7 727 aaKnown RBP11.02□□□□□ -0.65
MSL3-206ENST00000380693 ADAMTS12P58397 1594 aa11.02□□□□□ -0.65
MSL3-206ENST00000380693 SUPT6HQ7KZ85 1726 aaKnown RBP11.02□□□□□ -0.65
MSL3-206ENST00000380693 IQGAP2Q13576 1575 aa11.01□□□□□ -0.65
MSL3-206ENST00000380693 UGGT2Q9NYU1 1516 aa11.01□□□□□ -0.65
MSL3-206ENST00000380693 SENP3Q9H4L4 574 aaPredicted RBP11.01□□□□□ -0.65
MSL3-206ENST00000380693 HECW1Q76N89 1606 aa10.99□□□□□ -0.65
MSL3-206ENST00000380693 PTPRKQ15262 1439 aa10.99□□□□□ -0.65
MSL3-206ENST00000380693 UACAQ9BZF9 1416 aa10.99□□□□□ -0.65
MSL3-206ENST00000380693 PTPN23Q9H3S7 1636 aa10.98□□□□□ -0.65
MSL3-206ENST00000380693 IFT140Q96RY7 1462 aa10.98□□□□□ -0.65
MSL3-206ENST00000380693 TCOF1Q13428 1488 aaKnown RBP10.97□□□□□ -0.65
MSL3-206ENST00000380693 NAIPQ13075 1403 aa10.97□□□□□ -0.65
MSL3-206ENST00000380693 MAGI3Q5TCQ9 1506 aa10.97□□□□□ -0.65
MSL3-206ENST00000380693 SIN3AQ96ST3 1273 aa10.97□□□□□ -0.65
MSL3-206ENST00000380693 WDR62O43379 1518 aa10.97□□□□□ -0.65
MSL3-206ENST00000380693 PPP1R15AO75807 674 aaPredicted RBP10.95□□□□□ -0.66
MSL3-206ENST00000380693 EPRSP07814 1512 aaKnown RBP10.95□□□□□ -0.66
MSL3-206ENST00000380693 AKNAQ7Z591 1439 aa10.95□□□□□ -0.66
MSL3-206ENST00000380693 MIA2Q96PC5 1412 aa10.94□□□□□ -0.66
MSL3-206ENST00000380693 KIAA0586Q9BVV6 1533 aa10.93□□□□□ -0.66
MSL3-206ENST00000380693 ZNF608Q9ULD9 1512 aaPredicted RBP10.91□□□□□ -0.66
MSL3-206ENST00000380693 GCC2Q8IWJ2 1684 aa10.91□□□□□ -0.66
MSL3-206ENST00000380693 DISP1Q96F81 1524 aa10.89□□□□□ -0.67
MSL3-206ENST00000380693 KIAA0556O60303 1618 aa10.89□□□□□ -0.67
MSL3-206ENST00000380693 TONSLQ96HA7 1378 aa10.89□□□□□ -0.67
MSL3-206ENST00000380693 CDK13Q14004 1512 aaKnown RBP10.88□□□□□ -0.67
MSL3-206ENST00000380693 GRIN2AQ12879 1464 aa10.88□□□□□ -0.67
MSL3-206ENST00000380693 EIF4G3O43432 1585 aaKnown RBP10.86□□□□□ -0.67
MSL3-206ENST00000380693 MAGI1Q96QZ7 1491 aaPredicted RBP10.86□□□□□ -0.67
MSL3-206ENST00000380693 KDM5BQ9UGL1 1544 aa10.86□□□□□ -0.67
MSL3-206ENST00000380693 ROCK1Q13464 1354 aa10.85□□□□□ -0.67
MSL3-206ENST00000380693 NUP153P49790 1475 aaKnown RBP10.85□□□□□ -0.67
MSL3-206ENST00000380693 DENND4BO75064 1496 aaPredicted RBP10.84□□□□□ -0.67
MSL3-206ENST00000380693 RAPGEF6Q8TEU7 1601 aa10.83□□□□□ -0.68
MSL3-206ENST00000380693 DDX10Q13206 875 aaKnown RBP10.83□□□□□ -0.68
MSL3-206ENST00000380693 RRP7BPQ9NSQ0 103 aa10.82□□□□□ -0.68
MSL3-206ENST00000380693 DNMT1P26358 1616 aaKnown RBP10.81□□□□□ -0.68
MSL3-206ENST00000380693 SYNJ2O15056 1496 aa10.81□□□□□ -0.68
MSL3-206ENST00000380693 DAPK1P53355 1430 aa10.81□□□□□ -0.68
MSL3-206ENST00000380693 CCER2I3L3R5 266 aa10.81□□□□□ -0.68
MSL3-206ENST00000380693 CDK11AQ9UQ88 783 aaPredicted RBP10.81□□□□□ -0.68
MSL3-206ENST00000380693 KDM6BO15054 1643 aa10.8□□□□□ -0.68
MSL3-206ENST00000380693 ABCC5O15440 1437 aa10.79□□□□□ -0.68
MSL3-206ENST00000380693 CHIC2Q9UKJ5 165 aa10.79□□□□□ -0.68
MSL3-206ENST00000380693 ERCC6Q03468 1493 aa10.79□□□□□ -0.68
MSL3-206ENST00000380693 NUP160Q12769 1436 aa10.79□□□□□ -0.68
MSL3-206ENST00000380693 TROQ12816 1431 aaPredicted RBP10.79□□□□□ -0.68
MSL3-206ENST00000380693 CEP170Q5SW79 1584 aa10.78□□□□□ -0.68
MSL3-206ENST00000380693 KCNH8Q96L42 1107 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms