RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 KIF21AQ7Z4S6 1674 aa8.49□□□□□ -1.05
DDX58-201ENST00000379868 RUSC2Q8N2Y8 1516 aa8.48□□□□□ -1.05
DDX58-201ENST00000379868 GOLGA3Q08378 1498 aa8.48□□□□□ -1.05
DDX58-201ENST00000379868 MAP3K1Q13233 1512 aa8.48□□□□□ -1.05
DDX58-201ENST00000379868 CLIP1P30622 1438 aa8.47□□□□□ -1.05
DDX58-201ENST00000379868 ABCA5Q8WWZ7 1642 aa8.47□□□□□ -1.05
DDX58-201ENST00000379868 IGF1RP08069 1367 aa8.47□□□□□ -1.05
DDX58-201ENST00000379868 CTTNBP2Q8WZ74 1663 aa8.47□□□□□ -1.05
DDX58-201ENST00000379868 PLEKHD1A6NEE1 506 aa8.47□□□□□ -1.05
DDX58-201ENST00000379868 TNIKQ9UKE5 1360 aa8.47□□□□□ -1.05
DDX58-201ENST00000379868 GRIN2BQ13224 1484 aa8.46□□□□□ -1.06
DDX58-201ENST00000379868 DNMBPQ6XZF7 1577 aa8.46□□□□□ -1.06
DDX58-201ENST00000379868 CARMIL2Q6F5E8 1435 aa8.45□□□□□ -1.06
DDX58-201ENST00000379868 ZNF608Q9ULD9 1512 aaPredicted RBP8.45□□□□□ -1.06
DDX58-201ENST00000379868 PLPPR3Q6T4P5 718 aa8.44□□□□□ -1.06
DDX58-201ENST00000379868 RAPGEF2Q9Y4G8 1499 aa8.44□□□□□ -1.06
DDX58-201ENST00000379868 SNAPC4Q5SXM2 1469 aa8.42□□□□□ -1.06
DDX58-201ENST00000379868 MTUS2Q5JR59 1369 aa8.42□□□□□ -1.06
DDX58-201ENST00000379868 SAMD9Q5K651 1589 aa8.42□□□□□ -1.06
DDX58-201ENST00000379868 FHAD1B1AJZ9 1412 aa8.41□□□□□ -1.06
DDX58-201ENST00000379868 CEP162Q5TB80 1403 aa8.4□□□□□ -1.06
DDX58-201ENST00000379868 CUL7Q14999 1698 aa8.4□□□□□ -1.06
DDX58-201ENST00000379868 TARBP1Q13395 1621 aaKnown RBP8.39□□□□□ -1.07
DDX58-201ENST00000379868 ARAP1Q96P48 1450 aa8.39□□□□□ -1.07
DDX58-201ENST00000379868 PTPRGP23470 1445 aa8.38□□□□□ -1.07
DDX58-201ENST00000379868 ESF1Q9H501 851 aaKnown RBP8.37□□□□□ -1.07
DDX58-201ENST00000379868 TRIM52Q96A61 297 aa8.36□□□□□ -1.07
DDX58-201ENST00000379868 CCER1Q8TC90 406 aaPredicted RBP8.36□□□□□ -1.07
DDX58-201ENST00000379868 ABCA10Q8WWZ4 1543 aa8.36□□□□□ -1.07
DDX58-201ENST00000379868 FHOD3Q2V2M9 1422 aa8.35□□□□□ -1.07
DDX58-201ENST00000379868 CHIC2Q9UKJ5 165 aa8.35□□□□□ -1.07
DDX58-201ENST00000379868 PRG4Q92954 1404 aaPredicted RBP8.34□□□□□ -1.07
DDX58-201ENST00000379868 ARHGEF11O15085 1522 aa8.34□□□□□ -1.07
DDX58-201ENST00000379868 CFDP1Q9UEE9 299 aaPredicted RBP8.34□□□□□ -1.08
DDX58-201ENST00000379868 ARID4BQ4LE39 1312 aaPredicted RBP8.33□□□□□ -1.08
DDX58-201ENST00000379868 TSPY4P0CV99 314 aa8.33□□□□□ -1.08
DDX58-201ENST00000379868 TSPY10P0CW01 314 aa8.33□□□□□ -1.08
DDX58-201ENST00000379868 PBRM1Q86U86 1689 aa8.33□□□□□ -1.08
DDX58-201ENST00000379868 TRIM26Q12899 539 aaPredicted RBP8.33□□□□□ -1.08
DDX58-201ENST00000379868 SYNJ2O15056 1496 aa8.31□□□□□ -1.08
DDX58-201ENST00000379868 WDR62O43379 1518 aa8.31□□□□□ -1.08
DDX58-201ENST00000379868 FAM69CQ0P6D2 419 aa8.31□□□□□ -1.08
DDX58-201ENST00000379868 THOC2Q8NI27 1593 aaKnown RBP8.31□□□□□ -1.08
DDX58-201ENST00000379868 MAGI1Q96QZ7 1491 aaPredicted RBP8.3□□□□□ -1.08
DDX58-201ENST00000379868 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.3□□□□□ -1.08
DDX58-201ENST00000379868 FMN1Q68DA7 1419 aa8.28□□□□□ -1.08
DDX58-201ENST00000379868 RRBP1Q9P2E9 1410 aaKnown RBP8.28□□□□□ -1.08
DDX58-201ENST00000379868 GRIN2AQ12879 1464 aa8.28□□□□□ -1.08
DDX58-201ENST00000379868 VPS8Q8N3P4 1428 aa8.28□□□□□ -1.08
DDX58-201ENST00000379868 MLECQ14165 292 aa8.27□□□□□ -1.09
DDX58-201ENST00000379868 TIAM1Q13009 1591 aa8.26□□□□□ -1.09
DDX58-201ENST00000379868 CCNB3Q8WWL7 1395 aa8.26□□□□□ -1.09
DDX58-201ENST00000379868 POLR1AO95602 1720 aaPredicted RBP8.25□□□□□ -1.09
DDX58-201ENST00000379868 ARHGAP35Q9NRY4 1499 aa8.25□□□□□ -1.09
DDX58-201ENST00000379868 EFCAB5A4FU69 1503 aa8.25□□□□□ -1.09
DDX58-201ENST00000379868 BCANQ96GW7 911 aa8.24□□□□□ -1.09
DDX58-201ENST00000379868 KIAA0586Q9BVV6 1533 aa8.24□□□□□ -1.09
DDX58-201ENST00000379868 EFCAB2Q5VUJ9 269 aa8.24□□□□□ -1.09
DDX58-201ENST00000379868 RRP7BPQ9NSQ0 103 aa8.24□□□□□ -1.09
DDX58-201ENST00000379868 CHGAP10645 457 aaKnown RBP8.24□□□□□ -1.09
DDX58-201ENST00000379868 KANK4Q5T7N3 995 aaPredicted RBP8.24□□□□□ -1.09
DDX58-201ENST00000379868 EIF4G3O43432 1585 aaKnown RBP8.23□□□□□ -1.09
DDX58-201ENST00000379868 GCC2Q8IWJ2 1684 aa8.23□□□□□ -1.09
DDX58-201ENST00000379868 STAG3Q9UJ98 1225 aa8.23□□□□□ -1.09
DDX58-201ENST00000379868 KDM5BQ9UGL1 1544 aa8.22□□□□□ -1.09
DDX58-201ENST00000379868 ADCY10Q96PN6 1610 aa8.21□□□□□ -1.09
DDX58-201ENST00000379868 NEUROD1Q13562 356 aa8.2□□□□□ -1.1
DDX58-201ENST00000379868 PCF11O94913 1555 aaKnown RBP8.2□□□□□ -1.1
DDX58-201ENST00000379868 ZNF326Q5BKZ1 582 aaKnown RBP8.19□□□□□ -1.1
DDX58-201ENST00000379868 SENP3Q9H4L4 574 aaPredicted RBP8.19□□□□□ -1.1
DDX58-201ENST00000379868 CROCC2H7BZ55 1655 aa8.18□□□□□ -1.1
DDX58-201ENST00000379868 HNRNPMP52272 730 aaKnown RBP eCLIP8.18□□□□□ -1.1
DDX58-201ENST00000379868 GGT6Q6P531 493 aa8.18□□□□□ -1.1
DDX58-201ENST00000379868 MAPKBP1O60336 1514 aa8.18□□□□□ -1.1
DDX58-201ENST00000379868 DNAJC5Q9H3Z4 198 aa8.18□□□□□ -1.1
DDX58-201ENST00000379868 ADAMTS12P58397 1594 aa8.18□□□□□ -1.1
DDX58-201ENST00000379868 PHF23Q9BUL5 403 aaPredicted RBP8.18□□□□□ -1.1
DDX58-201ENST00000379868 IQGAP2Q13576 1575 aa8.17□□□□□ -1.1
DDX58-201ENST00000379868 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.16□□□□□ -1.1
DDX58-201ENST00000379868 POLR3GLQ9BT43 218 aa8.16□□□□□ -1.1
DDX58-201ENST00000379868 UACAQ9BZF9 1416 aa8.15□□□□□ -1.1
DDX58-201ENST00000379868 PLB1Q6P1J6 1458 aa8.15□□□□□ -1.1
DDX58-201ENST00000379868 CCDC18Q5T9S5 1454 aa8.14□□□□□ -1.11
DDX58-201ENST00000379868 SPAG9O60271 1321 aaKnown RBP8.13□□□□□ -1.11
DDX58-201ENST00000379868 FYCO1Q9BQS8 1478 aa8.12□□□□□ -1.11
DDX58-201ENST00000379868 SLC4A1APQ9BWU0 796 aaKnown RBP8.12□□□□□ -1.11
DDX58-201ENST00000379868 HECW1Q76N89 1606 aa8.12□□□□□ -1.11
DDX58-201ENST00000379868 KIF3BO15066 747 aa8.11□□□□□ -1.11
DDX58-201ENST00000379868 RAPGEF3O95398 923 aa8.1□□□□□ -1.11
DDX58-201ENST00000379868 TCOF1Q13428 1488 aaKnown RBP8.1□□□□□ -1.11
DDX58-201ENST00000379868 ZNF644Q9H582 1327 aaPredicted RBP8.1□□□□□ -1.11
DDX58-201ENST00000379868 NUP160Q12769 1436 aa8.1□□□□□ -1.11
DDX58-201ENST00000379868 AFAP1Q8N556 730 aa8.1□□□□□ -1.11
DDX58-201ENST00000379868 UGGT2Q9NYU1 1516 aa8.1□□□□□ -1.11
DDX58-201ENST00000379868 DENND4BO75064 1496 aaPredicted RBP8.1□□□□□ -1.11
DDX58-201ENST00000379868 MAGI3Q5TCQ9 1506 aa8.1□□□□□ -1.11
DDX58-201ENST00000379868 SHROOM2Q13796 1616 aa8.09□□□□□ -1.11
DDX58-201ENST00000379868 CNGB1Q14028 1251 aaPredicted RBP8.08□□□□□ -1.12
DDX58-201ENST00000379868 CASKIN1Q8WXD9 1431 aa8.08□□□□□ -1.12
DDX58-201ENST00000379868 PPP1R15AO75807 674 aaPredicted RBP8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms