RNA–Protein interactions for RNA: ENST00000378757.6

OPTN-205, Transcript of optineurin, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene OPTN, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-205ENST00000378757 ARID3CA6NKF2 412 aa14.12□□□□□ -0.15
OPTN-205ENST00000378757 CENPBP07199 599 aaPredicted RBP14.11□□□□□ -0.15
OPTN-205ENST00000378757 ARHGAP35Q9NRY4 1499 aa14.1□□□□□ -0.15
OPTN-205ENST00000378757 CARMIL1Q5VZK9 1371 aa14.09□□□□□ -0.15
OPTN-205ENST00000378757 MIER1Q8N108 512 aa14.07□□□□□ -0.16
OPTN-205ENST00000378757 GTF3C3Q9Y5Q9 886 aa14.07□□□□□ -0.16
OPTN-205ENST00000378757 ACIN1Q9UKV3 1341 aaKnown RBP14.05□□□□□ -0.16
OPTN-205ENST00000378757 PDS5BQ9NTI5 1447 aa14.05□□□□□ -0.16
OPTN-205ENST00000378757 ABCA5Q8WWZ7 1642 aa14.03□□□□□ -0.16
OPTN-205ENST00000378757 TARBP1Q13395 1621 aaKnown RBP14.01□□□□□ -0.17
OPTN-205ENST00000378757 TDRD9Q8NDG6 1382 aaKnown RBP14□□□□□ -0.17
OPTN-205ENST00000378757 CUL7Q14999 1698 aa13.99□□□□□ -0.17
OPTN-205ENST00000378757 CTTNBP2Q8WZ74 1663 aa13.96□□□□□ -0.17
OPTN-205ENST00000378757 HIRIP3Q9BW71 556 aaPredicted RBP13.95□□□□□ -0.18
OPTN-205ENST00000378757 GAPVD1Q14C86 1478 aa13.94□□□□□ -0.18
OPTN-205ENST00000378757 SIN3AQ96ST3 1273 aa13.92□□□□□ -0.18
OPTN-205ENST00000378757 CCNB3Q8WWL7 1395 aa13.91□□□□□ -0.18
OPTN-205ENST00000378757 PBRM1Q86U86 1689 aa13.9□□□□□ -0.18
OPTN-205ENST00000378757 MRC2Q9UBG0 1479 aa13.9□□□□□ -0.18
OPTN-205ENST00000378757 PCF11O94913 1555 aaKnown RBP13.89□□□□□ -0.19
OPTN-205ENST00000378757 FHOD3Q2V2M9 1422 aa13.88□□□□□ -0.19
OPTN-205ENST00000378757 TIAM1Q13009 1591 aa13.88□□□□□ -0.19
OPTN-205ENST00000378757 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.193e-7■■□□□ 11.5
OPTN-205ENST00000378757 FBLN2P98095 1184 aa13.87□□□□□ -0.19
OPTN-205ENST00000378757 CHIC2Q9UKJ5 165 aa13.87□□□□□ -0.19
OPTN-205ENST00000378757 DHX57Q6P158 1386 aaKnown RBP13.86□□□□□ -0.19
OPTN-205ENST00000378757 WDR62O43379 1518 aa13.85□□□□□ -0.19
OPTN-205ENST00000378757 ZNF608Q9ULD9 1512 aaPredicted RBP13.84□□□□□ -0.19
OPTN-205ENST00000378757 RRBP1Q9P2E9 1410 aaKnown RBP13.84□□□□□ -0.19
OPTN-205ENST00000378757 LRRIQ1Q96JM4 1722 aa13.83□□□□□ -0.19
OPTN-205ENST00000378757 CFAP43Q8NDM7 1665 aa13.83□□□□□ -0.2
OPTN-205ENST00000378757 EFCAB5A4FU69 1503 aa13.83□□□□□ -0.2
OPTN-205ENST00000378757 MAP3K1Q13233 1512 aa13.83□□□□□ -0.2
OPTN-205ENST00000378757 SAMD9Q5K651 1589 aa13.83□□□□□ -0.2
OPTN-205ENST00000378757 RAB3GAP2Q9H2M9 1393 aa13.81□□□□□ -0.2
OPTN-205ENST00000378757 LRRC9Q6ZRR7 1453 aa13.81□□□□□ -0.2
OPTN-205ENST00000378757 ADAMTS12P58397 1594 aa13.8□□□□□ -0.2
OPTN-205ENST00000378757 DDX10Q13206 875 aaKnown RBP13.8□□□□□ -0.2
OPTN-205ENST00000378757 THOC2Q8NI27 1593 aaKnown RBP13.8□□□□□ -0.2
OPTN-205ENST00000378757 TRIM52Q96A61 297 aa13.79□□□□□ -0.2
OPTN-205ENST00000378757 MTUS2Q5JR59 1369 aa13.79□□□□□ -0.2
OPTN-205ENST00000378757 PHLDB1Q86UU1 1377 aa13.79□□□□□ -0.2
OPTN-205ENST00000378757 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
OPTN-205ENST00000378757 FHAD1B1AJZ9 1412 aa13.79□□□□□ -0.2
OPTN-205ENST00000378757 RRP7BPQ9NSQ0 103 aa13.78□□□□□ -0.2
OPTN-205ENST00000378757 CNGB1Q14028 1251 aaPredicted RBP13.77□□□□□ -0.21
OPTN-205ENST00000378757 FYCO1Q9BQS8 1478 aa13.77□□□□□ -0.21
OPTN-205ENST00000378757 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
OPTN-205ENST00000378757 IFT140Q96RY7 1462 aa13.76□□□□□ -0.21
OPTN-205ENST00000378757 EIF4G3O43432 1585 aaKnown RBP13.75□□□□□ -0.21
OPTN-205ENST00000378757 GRIN2BQ13224 1484 aa13.74□□□□□ -0.21
OPTN-205ENST00000378757 KCNH8Q96L42 1107 aa13.73□□□□□ -0.21
OPTN-205ENST00000378757 ERCC6Q03468 1493 aa13.73□□□□□ -0.21
OPTN-205ENST00000378757 IQGAP2Q13576 1575 aa13.7□□□□□ -0.22
OPTN-205ENST00000378757 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
OPTN-205ENST00000378757 SETD5Q9C0A6 1442 aa13.69□□□□□ -0.22
OPTN-205ENST00000378757 ZNF777Q9ULD5 760 aaPredicted RBP13.68□□□□□ -0.22
OPTN-205ENST00000378757 CLSPNQ9HAW4 1339 aa13.67□□□□□ -0.22
OPTN-205ENST00000378757 BCANQ96GW7 911 aa13.66□□□□□ -0.22
OPTN-205ENST00000378757 MAGI3Q5TCQ9 1506 aa13.66□□□□□ -0.22
OPTN-205ENST00000378757 FOXD1Q16676 465 aa13.66□□□□□ -0.22
OPTN-205ENST00000378757 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
OPTN-205ENST00000378757 GRIN2AQ12879 1464 aa13.63□□□□□ -0.23
OPTN-205ENST00000378757 TONSLQ96HA7 1378 aa13.63□□□□□ -0.23
OPTN-205ENST00000378757 UGGT2Q9NYU1 1516 aa13.63□□□□□ -0.23
OPTN-205ENST00000378757 PLPPR3Q6T4P5 718 aa13.62□□□□□ -0.23
OPTN-205ENST00000378757 DISP1Q96F81 1524 aa13.62□□□□□ -0.23
OPTN-205ENST00000378757 CEP170Q5SW79 1584 aa13.61□□□□□ -0.23
OPTN-205ENST00000378757 ZNF326Q5BKZ1 582 aaKnown RBP13.61□□□□□ -0.23
OPTN-205ENST00000378757 CHMP7Q8WUX9 453 aaPredicted RBP13.61□□□□□ -0.23
OPTN-205ENST00000378757 KIAA0556O60303 1618 aa13.59□□□□□ -0.23
OPTN-205ENST00000378757 KIAA0586Q9BVV6 1533 aa13.59□□□□□ -0.23
OPTN-205ENST00000378757 MAGI1Q96QZ7 1491 aaPredicted RBP13.57□□□□□ -0.24
OPTN-205ENST00000378757 CDK13Q14004 1512 aaKnown RBP13.57□□□□□ -0.24
OPTN-205ENST00000378757 ARHGEF11O15085 1522 aa13.57□□□□□ -0.24
OPTN-205ENST00000378757 NCOA2Q15596 1464 aa13.57□□□□□ -0.24
OPTN-205ENST00000378757 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
OPTN-205ENST00000378757 HECW1Q76N89 1606 aa13.56□□□□□ -0.24
OPTN-205ENST00000378757 MAPKBP1O60336 1514 aa13.56□□□□□ -0.24
OPTN-205ENST00000378757 SUPT6HQ7KZ85 1726 aaKnown RBP13.56□□□□□ -0.24
OPTN-205ENST00000378757 EPRSP07814 1512 aaKnown RBP13.55□□□□□ -0.24
OPTN-205ENST00000378757 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
OPTN-205ENST00000378757 PTPRKQ15262 1439 aa13.55□□□□□ -0.24
OPTN-205ENST00000378757 ANP32CO43423 234 aa13.54□□□□□ -0.24
OPTN-205ENST00000378757 EHBP1L1Q8N3D4 1523 aa13.54□□□□□ -0.24
OPTN-205ENST00000378757 PPP1R15AO75807 674 aaPredicted RBP13.54□□□□□ -0.24
OPTN-205ENST00000378757 PELP1Q8IZL8 1130 aaKnown RBP13.54□□□□□ -0.24
OPTN-205ENST00000378757 ZNF644Q9H582 1327 aaPredicted RBP13.53□□□□□ -0.24
OPTN-205ENST00000378757 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.53□□□□□ -0.24
OPTN-205ENST00000378757 CCDC18Q5T9S5 1454 aa13.52□□□□□ -0.24
OPTN-205ENST00000378757 MYOM3Q5VTT5 1437 aa13.51□□□□□ -0.25
OPTN-205ENST00000378757 SENP3-EIF4A1A0A087X0R7 540 aa13.5□□□□□ -0.25
OPTN-205ENST00000378757 NUP160Q12769 1436 aa13.5□□□□□ -0.25
OPTN-205ENST00000378757 NUP153P49790 1475 aaKnown RBP13.5□□□□□ -0.25
OPTN-205ENST00000378757 PTPN23Q9H3S7 1636 aa13.49□□□□□ -0.25
OPTN-205ENST00000378757 RAPGEF6Q8TEU7 1601 aa13.48□□□□□ -0.25
OPTN-205ENST00000378757 SLC4A1APQ9BWU0 796 aaKnown RBP13.47□□□□□ -0.25
OPTN-205ENST00000378757 CDK11AQ9UQ88 783 aaPredicted RBP13.47□□□□□ -0.25
OPTN-205ENST00000378757 CFDP1Q9UEE9 299 aaPredicted RBP13.46□□□□□ -0.25
OPTN-205ENST00000378757 PLB1Q6P1J6 1458 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms