RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 PRXQ9BXM0 1461 aa33.31■■■□□ 2.92
RER1-204ENST00000378518 SHROOM2Q13796 1616 aa33.28■■■□□ 2.92
RER1-204ENST00000378518 FAM9AQ8IZU1 332 aaPredicted RBP33.27■■■□□ 2.92
RER1-204ENST00000378518 KIAA0586Q9BVV6 1533 aa33.26■■■□□ 2.91
RER1-204ENST00000378518 CTTNBP2Q8WZ74 1663 aa33.2■■■□□ 2.91
RER1-204ENST00000378518 IQGAP2Q13576 1575 aa33.17■■■□□ 2.9
RER1-204ENST00000378518 KIF21BO75037 1637 aa33.14■■■□□ 2.9
RER1-204ENST00000378518 JPH4Q96JJ6 628 aa33.13■■■□□ 2.89
RER1-204ENST00000378518 PRG4Q92954 1404 aaPredicted RBP33.08■■■□□ 2.89
RER1-204ENST00000378518 ARAP1Q96P48 1450 aa33.07■■■□□ 2.88
RER1-204ENST00000378518 ERCC6L2Q5T890 1561 aa33.07■■■□□ 2.88
RER1-204ENST00000378518 CYB5RLQ6IPT4 315 aa32.97■■■□□ 2.87
RER1-204ENST00000378518 UGGT2Q9NYU1 1516 aa32.95■■■□□ 2.87
RER1-204ENST00000378518 CARMIL2Q6F5E8 1435 aa32.94■■■□□ 2.86
RER1-204ENST00000378518 GOLGA3Q08378 1498 aa32.93■■■□□ 2.86
RER1-204ENST00000378518 KIAA0556O60303 1618 aa32.84■■■□□ 2.85
RER1-204ENST00000378518 DISP1Q96F81 1524 aa32.83■■■□□ 2.85
RER1-204ENST00000378518 EHMT2Q96KQ7 1210 aa32.81■■■□□ 2.84
RER1-204ENST00000378518 UBTFP17480 764 aaKnown RBP32.79■■■□□ 2.84
RER1-204ENST00000378518 TNIKQ9UKE5 1360 aa32.77■■■□□ 2.84
RER1-204ENST00000378518 PTPRGP23470 1445 aa32.72■■■□□ 2.83
RER1-204ENST00000378518 SAMD9Q5K651 1589 aa32.7■■■□□ 2.82
RER1-204ENST00000378518 TTBK1Q5TCY1 1321 aaPredicted RBP32.66■■■□□ 2.82
RER1-204ENST00000378518 EFCAB5A4FU69 1503 aa32.62■■■□□ 2.81
RER1-204ENST00000378518 RANGAP1P46060 587 aaPredicted RBP32.62■■■□□ 2.81
RER1-204ENST00000378518 ADCY10Q96PN6 1610 aa32.59■■■□□ 2.81
RER1-204ENST00000378518 P3H3Q8IVL6 736 aa32.54■■■□□ 2.8
RER1-204ENST00000378518 UACAQ9BZF9 1416 aa32.52■■■□□ 2.8
RER1-204ENST00000378518 UHRF1BP1LA0JNW5 1464 aa32.49■■■□□ 2.79
RER1-204ENST00000378518 ABCC2Q92887 1545 aa32.49■■■□□ 2.79
RER1-204ENST00000378518 NPM1P06748 294 aaKnown RBP eCLIP32.48■■■□□ 2.79
RER1-204ENST00000378518 FHOD3Q2V2M9 1422 aa32.46■■■□□ 2.79
RER1-204ENST00000378518 ABCA8O94911 1581 aa32.43■■■□□ 2.78
RER1-204ENST00000378518 PLB1Q6P1J6 1458 aa32.42■■■□□ 2.78
RER1-204ENST00000378518 ARHGAP35Q9NRY4 1499 aa32.42■■■□□ 2.78
RER1-204ENST00000378518 RAPGEF6Q8TEU7 1601 aa32.37■■■□□ 2.77
RER1-204ENST00000378518 MAPKBP1O60336 1514 aa32.35■■■□□ 2.77
RER1-204ENST00000378518 ZCCHC11Q5TAX3 1644 aaKnown RBP32.33■■■□□ 2.77
RER1-204ENST00000378518 KDM5BQ9UGL1 1544 aa32.32■■■□□ 2.76
RER1-204ENST00000378518 CLIP1P30622 1438 aa32.32■■■□□ 2.76
RER1-204ENST00000378518 FMN1Q68DA7 1419 aa32.29■■■□□ 2.76
RER1-204ENST00000378518 LOC105371045A0A1W2PR82 267 aa32.29■■■□□ 2.76
RER1-204ENST00000378518 TRHP20396 242 aaPredicted RBP32.27■■■□□ 2.76
RER1-204ENST00000378518 CEP162Q5TB80 1403 aa32.23■■■□□ 2.75
RER1-204ENST00000378518 ASXL2Q76L83 1435 aa32.17■■■□□ 2.74
RER1-204ENST00000378518 KIF13AQ9H1H9 1805 aa32.17■■■□□ 2.74
RER1-204ENST00000378518 HECW1Q76N89 1606 aa32.17■■■□□ 2.74
RER1-204ENST00000378518 NUP153P49790 1475 aaKnown RBP32.16■■■□□ 2.74
RER1-204ENST00000378518 ABCC10Q5T3U5 1492 aa32.13■■■□□ 2.73
RER1-204ENST00000378518 DIP2BQ9P265 1576 aa32.13■■■□□ 2.73
RER1-204ENST00000378518 ATP10BO94823 1461 aa32.12■■■□□ 2.73
RER1-204ENST00000378518 ARID3CA6NKF2 412 aa32.1■■■□□ 2.73
RER1-204ENST00000378518 WDR7Q9Y4E6 1490 aa32.08■■■□□ 2.73
RER1-204ENST00000378518 PCF11O94913 1555 aaKnown RBP32.07■■■□□ 2.72
RER1-204ENST00000378518 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP32.07■■■□□ 2.72
RER1-204ENST00000378518 HNRNPUL2Q1KMD3 747 aaKnown RBP32.07■■■□□ 2.72
RER1-204ENST00000378518 ATP1B4Q9UN42 357 aaPredicted RBP32.05■■■□□ 2.72
RER1-204ENST00000378518 CASKIN1Q8WXD9 1431 aa32.03■■■□□ 2.72
RER1-204ENST00000378518 FAM69CQ0P6D2 419 aa32.03■■■□□ 2.72
RER1-204ENST00000378518 FYCO1Q9BQS8 1478 aa32■■■□□ 2.71
RER1-204ENST00000378518 EPRSP07814 1512 aaKnown RBP32■■■□□ 2.71
RER1-204ENST00000378518 GLI2P10070 1586 aa31.99■■■□□ 2.71
RER1-204ENST00000378518 LRRIQ1Q96JM4 1722 aa31.97■■■□□ 2.71
RER1-204ENST00000378518 CDK13Q14004 1512 aaKnown RBP31.97■■■□□ 2.71
RER1-204ENST00000378518 CCDC18Q5T9S5 1454 aa31.94■■■□□ 2.7
RER1-204ENST00000378518 TSPOAP1O95153 1857 aa31.91■■■□□ 2.7
RER1-204ENST00000378518 PLEKHD1A6NEE1 506 aa31.9■■■□□ 2.7
RER1-204ENST00000378518 KCNH8Q96L42 1107 aa31.89■■■□□ 2.7
RER1-204ENST00000378518 MAP3K4Q9Y6R4 1608 aa31.88■■■□□ 2.69
RER1-204ENST00000378518 CFAP43Q8NDM7 1665 aa31.88■■■□□ 2.69
RER1-204ENST00000378518 CDK11AQ9UQ88 783 aaPredicted RBP31.86■■■□□ 2.69
RER1-204ENST00000378518 VPS8Q8N3P4 1428 aa31.83■■■□□ 2.69
RER1-204ENST00000378518 ABCA9Q8IUA7 1624 aa31.8■■■□□ 2.68
RER1-204ENST00000378518 PPRC1Q5VV67 1664 aaKnown RBP31.77■■■□□ 2.68
RER1-204ENST00000378518 TROQ12816 1431 aaPredicted RBP31.74■■■□□ 2.67
RER1-204ENST00000378518 CD109Q6YHK3 1445 aa31.74■■■□□ 2.67
RER1-204ENST00000378518 KIF14Q15058 1648 aa31.73■■■□□ 2.67
RER1-204ENST00000378518 TEX14Q8IWB6 1497 aa31.72■■■□□ 2.67
RER1-204ENST00000378518 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP31.69■■■□□ 2.664e-13■■■□□ 16.9
RER1-204ENST00000378518 MAGI3Q5TCQ9 1506 aa31.68■■■□□ 2.66
RER1-204ENST00000378518 TTC37Q6PGP7 1564 aa31.65■■■□□ 2.66
RER1-204ENST00000378518 TIAM1Q13009 1591 aa31.62■■■□□ 2.65
RER1-204ENST00000378518 MYO5CQ9NQX4 1742 aa31.61■■■□□ 2.65
RER1-204ENST00000378518 MTUS2Q5JR59 1369 aa31.59■■■□□ 2.65
RER1-204ENST00000378518 KDM6BO15054 1643 aa31.59■■■□□ 2.65
RER1-204ENST00000378518 EHBP1L1Q8N3D4 1523 aa31.59■■■□□ 2.65
RER1-204ENST00000378518 MAP3K1Q13233 1512 aa31.55■■■□□ 2.64
RER1-204ENST00000378518 CFAP74Q9C0B2 1584 aa31.55■■■□□ 2.64
RER1-204ENST00000378518 APLP2Q06481 763 aa31.52■■■□□ 2.64
RER1-204ENST00000378518 NEO1Q92859 1461 aa31.49■■■□□ 2.63
RER1-204ENST00000378518 ARAP3Q8WWN8 1544 aa31.48■■■□□ 2.63
RER1-204ENST00000378518 PLCH2O75038 1416 aa31.48■■■□□ 2.63
RER1-204ENST00000378518 SUPT6HQ7KZ85 1726 aaKnown RBP31.47■■■□□ 2.63
RER1-204ENST00000378518 PHLDB1Q86UU1 1377 aa31.47■■■□□ 2.63
RER1-204ENST00000378518 FANCAO15360 1455 aa31.46■■■□□ 2.63
RER1-204ENST00000378518 PREX2Q70Z35 1606 aa31.46■■■□□ 2.63
RER1-204ENST00000378518 CDC42BPAQ5VT25 1732 aa31.45■■■□□ 2.63
RER1-204ENST00000378518 LRRC9Q6ZRR7 1453 aa31.44■■■□□ 2.62
RER1-204ENST00000378518 CDC42BPBQ9Y5S2 1711 aa31.44■■■□□ 2.62
RER1-204ENST00000378518 ARHGAP5Q13017 1502 aa31.42■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms