RNA–Protein interactions for RNA: ENST00000378313.6

C19orf54-201, Transcript of chromosome 19 open reading frame 54, humanhuman

APPRIS P1 TSL 2 BASIC

Gene C19orf54, Length 2,753 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-201ENST00000378313 CUX1P39880 1505 aa22.75■■□□□ 1.23
C19orf54-201ENST00000378313 TIAM1Q13009 1591 aa22.74■■□□□ 1.23
C19orf54-201ENST00000378313 RBM19Q9Y4C8 960 aaKnown RBP22.74■■□□□ 1.23
C19orf54-201ENST00000378313 DDX10Q13206 875 aaKnown RBP22.73■■□□□ 1.23
C19orf54-201ENST00000378313 ITGAEP38570 1179 aa22.72■■□□□ 1.23
C19orf54-201ENST00000378313 LRRC9Q6ZRR7 1453 aa22.64■■□□□ 1.22
C19orf54-201ENST00000378313 ANP32CO43423 234 aa22.61■■□□□ 1.21
C19orf54-201ENST00000378313 SIN3AQ96ST3 1273 aa22.6■■□□□ 1.21
C19orf54-201ENST00000378313 PHLDB1Q86UU1 1377 aa22.58■■□□□ 1.21
C19orf54-201ENST00000378313 HMGXB3Q12766 1538 aa22.58■■□□□ 1.21
C19orf54-201ENST00000378313 CFAP43Q8NDM7 1665 aa22.55■■□□□ 1.2
C19orf54-201ENST00000378313 TRIM52Q96A61 297 aa22.53■■□□□ 1.2
C19orf54-201ENST00000378313 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.52■■□□□ 1.2
C19orf54-201ENST00000378313 CFTRP13569 1480 aa22.52■■□□□ 1.19
C19orf54-201ENST00000378313 NCAPD3P42695 1498 aa22.52■■□□□ 1.19
C19orf54-201ENST00000378313 FHAD1B1AJZ9 1412 aa22.51■■□□□ 1.19
C19orf54-201ENST00000378313 FANCIQ9NVI1 1328 aa22.5■■□□□ 1.19
C19orf54-201ENST00000378313 IGF1RP08069 1367 aa22.5■■□□□ 1.19
C19orf54-201ENST00000378313 FAM50AQ14320 339 aaKnown RBP22.47■■□□□ 1.19
C19orf54-201ENST00000378313 MSH5O43196 834 aa22.46■■□□□ 1.19
C19orf54-201ENST00000378313 PRDM2Q13029 1718 aa22.41■■□□□ 1.18
C19orf54-201ENST00000378313 PCF11O94913 1555 aaKnown RBP22.41■■□□□ 1.18
C19orf54-201ENST00000378313 CARMIL1Q5VZK9 1371 aa22.41■■□□□ 1.18
C19orf54-201ENST00000378313 HIRIP3Q9BW71 556 aaPredicted RBP22.4■■□□□ 1.18
C19orf54-201ENST00000378313 ERICH6BQ5W0A0 696 aa22.39■■□□□ 1.17
C19orf54-201ENST00000378313 CDK11AQ9UQ88 783 aaPredicted RBP22.38■■□□□ 1.17
C19orf54-201ENST00000378313 TONSLQ96HA7 1378 aa22.38■■□□□ 1.17
C19orf54-201ENST00000378313 FYCO1Q9BQS8 1478 aa22.35■■□□□ 1.17
C19orf54-201ENST00000378313 PRKCSHP14314 528 aaPredicted RBP22.33■■□□□ 1.17
C19orf54-201ENST00000378313 AQRO60306 1485 aaKnown RBP eCLIP22.33■■□□□ 1.166e-6■■■■□ 25.1
C19orf54-201ENST00000378313 UACAQ9BZF9 1416 aa22.31■■□□□ 1.16
C19orf54-201ENST00000378313 MYT1LQ9UL68 1186 aa22.3■■□□□ 1.16
C19orf54-201ENST00000378313 FGD5Q6ZNL6 1462 aa22.3■■□□□ 1.16
C19orf54-201ENST00000378313 CASKIN1Q8WXD9 1431 aa22.29■■□□□ 1.16
C19orf54-201ENST00000378313 CCDC18Q5T9S5 1454 aa22.29■■□□□ 1.16
C19orf54-201ENST00000378313 EFCAB5A4FU69 1503 aa22.28■■□□□ 1.16
C19orf54-201ENST00000378313 HNRNPUQ00839 825 aaKnown RBP eCLIP22.28■■□□□ 1.16
C19orf54-201ENST00000378313 HFM1A2PYH4 1435 aa22.27■■□□□ 1.16
C19orf54-201ENST00000378313 ERICH6Q7L0X2 663 aa22.27■■□□□ 1.15
C19orf54-201ENST00000378313 FGD6Q6ZV73 1430 aa22.26■■□□□ 1.15
C19orf54-201ENST00000378313 KDM5BQ9UGL1 1544 aa22.24■■□□□ 1.15
C19orf54-201ENST00000378313 PTPN23Q9H3S7 1636 aa22.24■■□□□ 1.15
C19orf54-201ENST00000378313 PPP4R2Q9NY27 417 aa22.23■■□□□ 1.15
C19orf54-201ENST00000378313 FHOD3Q2V2M9 1422 aa22.19■■□□□ 1.14
C19orf54-201ENST00000378313 NCOA2Q15596 1464 aa22.16■■□□□ 1.14
C19orf54-201ENST00000378313 PTPRKQ15262 1439 aa22.15■■□□□ 1.14
C19orf54-201ENST00000378313 IRX6P78412 446 aaPredicted RBP22.15■■□□□ 1.14
C19orf54-201ENST00000378313 ATP1B4Q9UN42 357 aaPredicted RBP22.15■■□□□ 1.14
C19orf54-201ENST00000378313 P3H3Q8IVL6 736 aa22.15■■□□□ 1.14
C19orf54-201ENST00000378313 NAIPQ13075 1403 aa22.15■■□□□ 1.14
C19orf54-201ENST00000378313 FMN1Q68DA7 1419 aa22.13■■□□□ 1.13
C19orf54-201ENST00000378313 WASHC2AQ641Q2 1341 aa22.13■■□□□ 1.13
C19orf54-201ENST00000378313 CADPSQ9ULU8 1353 aa22.11■■□□□ 1.13
C19orf54-201ENST00000378313 CNTLNQ9NXG0 1405 aa22.1■■□□□ 1.13
C19orf54-201ENST00000378313 SNAPC4Q5SXM2 1469 aa22.09■■□□□ 1.13
C19orf54-201ENST00000378313 CTTNBP2Q8WZ74 1663 aa22.09■■□□□ 1.13
C19orf54-201ENST00000378313 HSPA5P11021 654 aaKnown RBP22.08■■□□□ 1.13
C19orf54-201ENST00000378313 CC2D2AQ9P2K1 1620 aa22.07■■□□□ 1.12
C19orf54-201ENST00000378313 MTUS2Q5JR59 1369 aa22.06■■□□□ 1.12
C19orf54-201ENST00000378313 MYOM3Q5VTT5 1437 aa22.06■■□□□ 1.12
C19orf54-201ENST00000378313 CUL7Q14999 1698 aa22.05■■□□□ 1.12
C19orf54-201ENST00000378313 ZBED9Q6R2W3 1325 aa22.04■■□□□ 1.12
C19orf54-201ENST00000378313 EIF4G2P78344 907 aaKnown RBP eCLIP22.03■■□□□ 1.12
C19orf54-201ENST00000378313 HECW1Q76N89 1606 aa22.02■■□□□ 1.12
C19orf54-201ENST00000378313 ABCA10Q8WWZ4 1543 aa22.02■■□□□ 1.12
C19orf54-201ENST00000378313 THOC2Q8NI27 1593 aaKnown RBP22■■□□□ 1.11
C19orf54-201ENST00000378313 DEKP35659 375 aaKnown RBP22■■□□□ 1.11
C19orf54-201ENST00000378313 SUPT6HQ7KZ85 1726 aaKnown RBP22■■□□□ 1.11
C19orf54-201ENST00000378313 PRKRIP1Q9H875 184 aaPredicted RBP21.99■■□□□ 1.11
C19orf54-201ENST00000378313 NCOA1Q15788 1441 aa21.99■■□□□ 1.11
C19orf54-201ENST00000378313 GCC2Q8IWJ2 1684 aa21.98■■□□□ 1.11
C19orf54-201ENST00000378313 CCDC184Q52MB2 194 aa21.97■■□□□ 1.11
C19orf54-201ENST00000378313 EHBP1L1Q8N3D4 1523 aa21.97■■□□□ 1.11
C19orf54-201ENST00000378313 LRRIQ1Q96JM4 1722 aa21.97■■□□□ 1.11
C19orf54-201ENST00000378313 AKNAQ7Z591 1439 aa21.96■■□□□ 1.11
C19orf54-201ENST00000378313 SAMD9Q5K651 1589 aa21.96■■□□□ 1.11
C19orf54-201ENST00000378313 DENND4BO75064 1496 aaPredicted RBP21.96■■□□□ 1.11
C19orf54-201ENST00000378313 CCDC7Q96M83 1385 aa21.95■■□□□ 1.11
C19orf54-201ENST00000378313 B4GALNT3Q6L9W6 998 aa21.95■■□□□ 1.1
C19orf54-201ENST00000378313 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
C19orf54-201ENST00000378313 NOP58Q9Y2X3 529 aaKnown RBP21.94■■□□□ 1.1
C19orf54-201ENST00000378313 DNMBPQ6XZF7 1577 aa21.94■■□□□ 1.1
C19orf54-201ENST00000378313 ARHGEF11O15085 1522 aa21.94■■□□□ 1.1
C19orf54-201ENST00000378313 UGGT2Q9NYU1 1516 aa21.93■■□□□ 1.1
C19orf54-201ENST00000378313 TCOF1Q13428 1488 aaKnown RBP21.93■■□□□ 1.1
C19orf54-201ENST00000378313 MRS2Q9HD23 443 aa21.91■■□□□ 1.1
C19orf54-201ENST00000378313 ABCA5Q8WWZ7 1642 aa21.9■■□□□ 1.1
C19orf54-201ENST00000378313 FAM9BQ8IZU0 186 aa21.9■■□□□ 1.1
C19orf54-201ENST00000378313 FANCD2Q9BXW9 1451 aa21.89■■□□□ 1.09
C19orf54-201ENST00000378313 RAD54L2Q9Y4B4 1467 aa21.89■■□□□ 1.09
C19orf54-201ENST00000378313 POLR1AO95602 1720 aaPredicted RBP21.89■■□□□ 1.09
C19orf54-201ENST00000378313 SMG6Q86US8 1419 aaKnown RBP21.87■■□□□ 1.09
C19orf54-201ENST00000378313 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
C19orf54-201ENST00000378313 C11orf95C9JLR9 678 aaPredicted RBP21.86■■□□□ 1.09
C19orf54-201ENST00000378313 KIF21AQ7Z4S6 1674 aa21.84■■□□□ 1.09
C19orf54-201ENST00000378313 L3MBTL2Q969R5 705 aa21.84■■□□□ 1.09
C19orf54-201ENST00000378313 RNF123Q5XPI4 1314 aa21.83■■□□□ 1.09
C19orf54-201ENST00000378313 TOPBP1Q92547 1522 aa21.83■■□□□ 1.09
C19orf54-201ENST00000378313 MPHOSPH9Q99550 1183 aa21.82■■□□□ 1.08
C19orf54-201ENST00000378313 RRP7BPQ9NSQ0 103 aa21.82■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms