RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 HNRNPUQ00839 825 aaKnown RBP eCLIP13.88□□□□□ -0.19
RNF38-206ENST00000377885 HIRIP3Q9BW71 556 aaPredicted RBP13.86□□□□□ -0.19
RNF38-206ENST00000377885 ATAD2BQ9ULI0 1458 aa13.86□□□□□ -0.19
RNF38-206ENST00000377885 ARAP1Q96P48 1450 aa13.86□□□□□ -0.19
RNF38-206ENST00000377885 CC2D2AQ9P2K1 1620 aa13.82□□□□□ -0.2
RNF38-206ENST00000377885 P3H3Q8IVL6 736 aa13.82□□□□□ -0.2
RNF38-206ENST00000377885 PRXQ9BXM0 1461 aa13.81□□□□□ -0.2
RNF38-206ENST00000377885 TOP2BQ02880 1626 aa13.81□□□□□ -0.2
RNF38-206ENST00000377885 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
RNF38-206ENST00000377885 PPP1R15AO75807 674 aaPredicted RBP13.78□□□□□ -0.2
RNF38-206ENST00000377885 PEG3Q9GZU2 1588 aa13.77□□□□□ -0.2
RNF38-206ENST00000377885 CUX2O14529 1486 aa13.77□□□□□ -0.21
RNF38-206ENST00000377885 NCAPD3P42695 1498 aa13.77□□□□□ -0.21
RNF38-206ENST00000377885 IRX6P78412 446 aaPredicted RBP13.76□□□□□ -0.21
RNF38-206ENST00000377885 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
RNF38-206ENST00000377885 RTL5Q5HYW3 569 aaPredicted RBP13.75□□□□□ -0.21
RNF38-206ENST00000377885 ERICH6BQ5W0A0 696 aa13.73□□□□□ -0.21
RNF38-206ENST00000377885 PPP4R2Q9NY27 417 aa13.73□□□□□ -0.21
RNF38-206ENST00000377885 ARHGAP35Q9NRY4 1499 aa13.72□□□□□ -0.21
RNF38-206ENST00000377885 FANCIQ9NVI1 1328 aa13.7□□□□□ -0.22
RNF38-206ENST00000377885 CARMIL1Q5VZK9 1371 aa13.7□□□□□ -0.22
RNF38-206ENST00000377885 WDR97A6NE52 1622 aa13.68□□□□□ -0.22
RNF38-206ENST00000377885 ANP32AP39687 249 aaKnown RBP13.68□□□□□ -0.22
RNF38-206ENST00000377885 FAM9BQ8IZU0 186 aa13.68□□□□□ -0.22
RNF38-206ENST00000377885 MTUS2Q5JR59 1369 aa13.68□□□□□ -0.22
RNF38-206ENST00000377885 EIF4G2P78344 907 aaKnown RBP eCLIP13.67□□□□□ -0.22
RNF38-206ENST00000377885 LRRC9Q6ZRR7 1453 aa13.66□□□□□ -0.22
RNF38-206ENST00000377885 HMGXB3Q12766 1538 aa13.66□□□□□ -0.22
RNF38-206ENST00000377885 MRS2Q9HD23 443 aa13.65□□□□□ -0.22
RNF38-206ENST00000377885 BIVM-ERCC5R4GMW8 1640 aa13.65□□□□□ -0.22
RNF38-206ENST00000377885 PHLDB1Q86UU1 1377 aa13.65□□□□□ -0.23
RNF38-206ENST00000377885 MAPKBP1O60336 1514 aa13.64□□□□□ -0.23
RNF38-206ENST00000377885 TIAM1Q13009 1591 aa13.64□□□□□ -0.23
RNF38-206ENST00000377885 POLR3GLQ9BT43 218 aa13.64□□□□□ -0.23
RNF38-206ENST00000377885 MAP3K1Q13233 1512 aa13.62□□□□□ -0.23
RNF38-206ENST00000377885 CNGB1Q14028 1251 aaPredicted RBP13.6□□□□□ -0.23
RNF38-206ENST00000377885 CUX1P39880 1505 aa13.6□□□□□ -0.23
RNF38-206ENST00000377885 NBR1Q14596 966 aa13.59□□□□□ -0.23
RNF38-206ENST00000377885 IGF1RP08069 1367 aa13.59□□□□□ -0.23
RNF38-206ENST00000377885 NOP58Q9Y2X3 529 aaKnown RBP13.59□□□□□ -0.23
RNF38-206ENST00000377885 HSPA5P11021 654 aaKnown RBP13.58□□□□□ -0.24
RNF38-206ENST00000377885 CCDC136Q96JN2 1154 aa13.58□□□□□ -0.24
RNF38-206ENST00000377885 B4GALNT3Q6L9W6 998 aa13.58□□□□□ -0.24
RNF38-206ENST00000377885 DEKP35659 375 aaKnown RBP13.57□□□□□ -0.24
RNF38-206ENST00000377885 CCDC18Q5T9S5 1454 aa13.56□□□□□ -0.24
RNF38-206ENST00000377885 ZBTB47Q9UFB7 747 aaPredicted RBP13.56□□□□□ -0.24
RNF38-206ENST00000377885 CHIC2Q9UKJ5 165 aa13.55□□□□□ -0.24
RNF38-206ENST00000377885 RRP7BPQ9NSQ0 103 aa13.54□□□□□ -0.24
RNF38-206ENST00000377885 MSH5O43196 834 aa13.54□□□□□ -0.24
RNF38-206ENST00000377885 CADPSQ9ULU8 1353 aa13.54□□□□□ -0.24
RNF38-206ENST00000377885 FHOD3Q2V2M9 1422 aa13.53□□□□□ -0.24
RNF38-206ENST00000377885 FMN1Q68DA7 1419 aa13.53□□□□□ -0.24
RNF38-206ENST00000377885 UACAQ9BZF9 1416 aa13.53□□□□□ -0.24
RNF38-206ENST00000377885 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.52□□□□□ -0.24
RNF38-206ENST00000377885 FGD6Q6ZV73 1430 aa13.5□□□□□ -0.25
RNF38-206ENST00000377885 DAXXQ9UER7 740 aaPredicted RBP13.5□□□□□ -0.25
RNF38-206ENST00000377885 CFTRP13569 1480 aa13.5□□□□□ -0.25
RNF38-206ENST00000377885 ERCC6Q03468 1493 aa13.49□□□□□ -0.25
RNF38-206ENST00000377885 FYCO1Q9BQS8 1478 aa13.48□□□□□ -0.25
RNF38-206ENST00000377885 PDS5BQ9NTI5 1447 aa13.48□□□□□ -0.25
RNF38-206ENST00000377885 ZBED9Q6R2W3 1325 aa13.48□□□□□ -0.25
RNF38-206ENST00000377885 CASKIN1Q8WXD9 1431 aa13.47□□□□□ -0.25
RNF38-206ENST00000377885 ZNF326Q5BKZ1 582 aaKnown RBP13.47□□□□□ -0.25
RNF38-206ENST00000377885 NPM2Q86SE8 214 aaKnown RBP13.45□□□□□ -0.26
RNF38-206ENST00000377885 PRKRIP1Q9H875 184 aaPredicted RBP13.45□□□□□ -0.26
RNF38-206ENST00000377885 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
RNF38-206ENST00000377885 CNTLNQ9NXG0 1405 aa13.45□□□□□ -0.26
RNF38-206ENST00000377885 WASHC2AQ641Q2 1341 aa13.45□□□□□ -0.26
RNF38-206ENST00000377885 FGD5Q6ZNL6 1462 aa13.44□□□□□ -0.26
RNF38-206ENST00000377885 TMC1Q8TDI8 760 aa13.44□□□□□ -0.26
RNF38-206ENST00000377885 PCF11O94913 1555 aaKnown RBP13.44□□□□□ -0.26
RNF38-206ENST00000377885 EFCAB5A4FU69 1503 aa13.42□□□□□ -0.26
RNF38-206ENST00000377885 IPO9Q96P70 1041 aaKnown RBP13.41□□□□□ -0.26
RNF38-206ENST00000377885 L3MBTL2Q969R5 705 aa13.41□□□□□ -0.26
RNF38-206ENST00000377885 MPHOSPH9Q99550 1183 aa13.41□□□□□ -0.26
RNF38-206ENST00000377885 SLC4A1APQ9BWU0 796 aaKnown RBP13.4□□□□□ -0.26
RNF38-206ENST00000377885 MYOM3Q5VTT5 1437 aa13.4□□□□□ -0.26
RNF38-206ENST00000377885 NUDCQ9Y266 331 aa13.4□□□□□ -0.26
RNF38-206ENST00000377885 NESP48681 1621 aa13.39□□□□□ -0.27
RNF38-206ENST00000377885 CCDC7Q96M83 1385 aa13.38□□□□□ -0.27
RNF38-206ENST00000377885 AQRO60306 1485 aaKnown RBP eCLIP13.38□□□□□ -0.27
RNF38-206ENST00000377885 CFAP43Q8NDM7 1665 aa13.38□□□□□ -0.27
RNF38-206ENST00000377885 FANCD2Q9BXW9 1451 aa13.37□□□□□ -0.27
RNF38-206ENST00000377885 ARID3CA6NKF2 412 aa13.37□□□□□ -0.27
RNF38-206ENST00000377885 NAIPQ13075 1403 aa13.35□□□□□ -0.27
RNF38-206ENST00000377885 NCOA2Q15596 1464 aa13.35□□□□□ -0.27
RNF38-206ENST00000377885 LAMC3Q9Y6N6 1575 aa13.34□□□□□ -0.27
RNF38-206ENST00000377885 PTPN23Q9H3S7 1636 aa13.33□□□□□ -0.27
RNF38-206ENST00000377885 PPM1GO15355 546 aaPredicted RBP13.33□□□□□ -0.28
RNF38-206ENST00000377885 FOXD1Q16676 465 aa13.33□□□□□ -0.28
RNF38-206ENST00000377885 CCDC184Q52MB2 194 aa13.32□□□□□ -0.28
RNF38-206ENST00000377885 DDRGK1Q96HY6 314 aa13.32□□□□□ -0.28
RNF38-206ENST00000377885 NEFMP07197 916 aa13.3□□□□□ -0.28
RNF38-206ENST00000377885 TCERG1O14776 1098 aaKnown RBP13.3□□□□□ -0.28
RNF38-206ENST00000377885 KIF7Q2M1P5 1343 aa13.29□□□□□ -0.28
RNF38-206ENST00000377885 SMG6Q86US8 1419 aaKnown RBP13.29□□□□□ -0.28
RNF38-206ENST00000377885 EHBP1L1Q8N3D4 1523 aa13.28□□□□□ -0.28
RNF38-206ENST00000377885 SALL2Q9Y467 1007 aaPredicted RBP13.28□□□□□ -0.28
RNF38-206ENST00000377885 LAS1LQ9Y4W2 734 aaKnown RBP13.28□□□□□ -0.28
RNF38-206ENST00000377885 PAK3O75914 559 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms