RNA–Protein interactions for RNA: ENST00000377806.7

CEACAM1-205, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,773 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-205ENST00000377806 ABCA5Q8WWZ7 1642 aa18.89■□□□□ 0.61
CEACAM1-205ENST00000377806 CUL7Q14999 1698 aa18.87■□□□□ 0.61
CEACAM1-205ENST00000377806 RANGAP1P46060 587 aaPredicted RBP18.87■□□□□ 0.61
CEACAM1-205ENST00000377806 EIF4G3O43432 1585 aaKnown RBP18.84■□□□□ 0.61
CEACAM1-205ENST00000377806 EIF5BO60841 1220 aaKnown RBP18.83■□□□□ 0.6
CEACAM1-205ENST00000377806 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
CEACAM1-205ENST00000377806 AQRO60306 1485 aaKnown RBP eCLIP18.79■□□□□ 0.61e-6■■□□□ 14.5
CEACAM1-205ENST00000377806 GAPVD1Q14C86 1478 aa18.79■□□□□ 0.6
CEACAM1-205ENST00000377806 TDRD9Q8NDG6 1382 aaKnown RBP18.78■□□□□ 0.6
CEACAM1-205ENST00000377806 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
CEACAM1-205ENST00000377806 CTTNBP2Q8WZ74 1663 aa18.71■□□□□ 0.59
CEACAM1-205ENST00000377806 CENPBP07199 599 aaPredicted RBP18.7■□□□□ 0.58
CEACAM1-205ENST00000377806 EFCAB5A4FU69 1503 aa18.68■□□□□ 0.58
CEACAM1-205ENST00000377806 MAP3K1Q13233 1512 aa18.67■□□□□ 0.58
CEACAM1-205ENST00000377806 PBRM1Q86U86 1689 aa18.67■□□□□ 0.58
CEACAM1-205ENST00000377806 KANK4Q5T7N3 995 aaPredicted RBP18.66■□□□□ 0.58
CEACAM1-205ENST00000377806 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.63■□□□□ 0.57
CEACAM1-205ENST00000377806 CHD1O14646 1710 aa18.62■□□□□ 0.57
CEACAM1-205ENST00000377806 FHAD1B1AJZ9 1412 aa18.62■□□□□ 0.57
CEACAM1-205ENST00000377806 SNAPC4Q5SXM2 1469 aa18.61■□□□□ 0.57
CEACAM1-205ENST00000377806 TIAM1Q13009 1591 aa18.61■□□□□ 0.57
CEACAM1-205ENST00000377806 ADAMTS12P58397 1594 aa18.6■□□□□ 0.57
CEACAM1-205ENST00000377806 PCF11O94913 1555 aaKnown RBP18.59■□□□□ 0.57
CEACAM1-205ENST00000377806 SAMD9Q5K651 1589 aa18.59■□□□□ 0.57
CEACAM1-205ENST00000377806 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
CEACAM1-205ENST00000377806 FHOD3Q2V2M9 1422 aa18.58■□□□□ 0.56
CEACAM1-205ENST00000377806 RRBP1Q9P2E9 1410 aaKnown RBP18.57■□□□□ 0.56
CEACAM1-205ENST00000377806 NCBP3Q53F19 620 aaKnown RBP18.57■□□□□ 0.56
CEACAM1-205ENST00000377806 DNAJC5Q9H3Z4 198 aa18.57■□□□□ 0.56
CEACAM1-205ENST00000377806 CCER1Q8TC90 406 aaPredicted RBP18.55■□□□□ 0.56
CEACAM1-205ENST00000377806 CFAP43Q8NDM7 1665 aa18.55■□□□□ 0.56
CEACAM1-205ENST00000377806 FYCO1Q9BQS8 1478 aa18.53■□□□□ 0.56
CEACAM1-205ENST00000377806 FBLN2P98095 1184 aa18.53■□□□□ 0.56
CEACAM1-205ENST00000377806 CASKIN1Q8WXD9 1431 aa18.53■□□□□ 0.56
CEACAM1-205ENST00000377806 LRRC9Q6ZRR7 1453 aa18.52■□□□□ 0.56
CEACAM1-205ENST00000377806 P3H3Q8IVL6 736 aa18.52■□□□□ 0.55
CEACAM1-205ENST00000377806 MAGI1Q96QZ7 1491 aaPredicted RBP18.52■□□□□ 0.55
CEACAM1-205ENST00000377806 HNRNPUL2Q1KMD3 747 aaKnown RBP18.5■□□□□ 0.55
CEACAM1-205ENST00000377806 FMN1Q68DA7 1419 aa18.49■□□□□ 0.55
CEACAM1-205ENST00000377806 SYNJ2O15056 1496 aa18.47■□□□□ 0.55
CEACAM1-205ENST00000377806 OSCARQ8IYS5 282 aa18.46■□□□□ 0.55
CEACAM1-205ENST00000377806 IQGAP2Q13576 1575 aa18.44■□□□□ 0.54
CEACAM1-205ENST00000377806 CCNB3Q8WWL7 1395 aa18.44■□□□□ 0.54
CEACAM1-205ENST00000377806 CHMP7Q8WUX9 453 aaPredicted RBP18.43■□□□□ 0.54
CEACAM1-205ENST00000377806 UGGT2Q9NYU1 1516 aa18.4■□□□□ 0.54
CEACAM1-205ENST00000377806 PHLDB1Q86UU1 1377 aa18.4■□□□□ 0.54
CEACAM1-205ENST00000377806 GRIN2AQ12879 1464 aa18.39■□□□□ 0.53
CEACAM1-205ENST00000377806 LRRIQ1Q96JM4 1722 aa18.38■□□□□ 0.53
CEACAM1-205ENST00000377806 KIAA0586Q9BVV6 1533 aa18.36■□□□□ 0.53
CEACAM1-205ENST00000377806 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
CEACAM1-205ENST00000377806 CLASP1Q7Z460 1538 aa18.34■□□□□ 0.53
CEACAM1-205ENST00000377806 ARXQ96QS3 562 aa18.34■□□□□ 0.53
CEACAM1-205ENST00000377806 ATP1B4Q9UN42 357 aaPredicted RBP18.31■□□□□ 0.52
CEACAM1-205ENST00000377806 DISP1Q96F81 1524 aa18.29■□□□□ 0.52
CEACAM1-205ENST00000377806 RIMBP3CA6NJZ7 1639 aa18.29■□□□□ 0.52
CEACAM1-205ENST00000377806 RIMBP3BA6NNM3 1639 aa18.29■□□□□ 0.52
CEACAM1-205ENST00000377806 RIMBP3Q9UFD9 1639 aa18.29■□□□□ 0.52
CEACAM1-205ENST00000377806 KIAA0556O60303 1618 aa18.28■□□□□ 0.52
CEACAM1-205ENST00000377806 NUP160Q12769 1436 aa18.27■□□□□ 0.52
CEACAM1-205ENST00000377806 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.27■□□□□ 0.52
CEACAM1-205ENST00000377806 CCDC18Q5T9S5 1454 aa18.27■□□□□ 0.51
CEACAM1-205ENST00000377806 HECW1Q76N89 1606 aa18.27■□□□□ 0.51
CEACAM1-205ENST00000377806 DHX57Q6P158 1386 aaKnown RBP18.26■□□□□ 0.51
CEACAM1-205ENST00000377806 ARHGEF11O15085 1522 aa18.26■□□□□ 0.51
CEACAM1-205ENST00000377806 UBE2Q2Q8WVN8 375 aa18.26■□□□□ 0.51
CEACAM1-205ENST00000377806 EHBP1L1Q8N3D4 1523 aa18.25■□□□□ 0.51
CEACAM1-205ENST00000377806 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
CEACAM1-205ENST00000377806 MTUS2Q5JR59 1369 aa18.23■□□□□ 0.51
CEACAM1-205ENST00000377806 CLSPNQ9HAW4 1339 aa18.23■□□□□ 0.51
CEACAM1-205ENST00000377806 EPRSP07814 1512 aaKnown RBP18.22■□□□□ 0.51
CEACAM1-205ENST00000377806 FGD6Q6ZV73 1430 aa18.21■□□□□ 0.51
CEACAM1-205ENST00000377806 NCOA2Q15596 1464 aa18.21■□□□□ 0.51
CEACAM1-205ENST00000377806 ERCC6L2Q5T890 1561 aa18.2■□□□□ 0.5
CEACAM1-205ENST00000377806 SUPT6HQ7KZ85 1726 aaKnown RBP18.19■□□□□ 0.5
CEACAM1-205ENST00000377806 MYOM3Q5VTT5 1437 aa18.16■□□□□ 0.5
CEACAM1-205ENST00000377806 SHROOM2Q13796 1616 aa18.16■□□□□ 0.5
CEACAM1-205ENST00000377806 ITGAEP38570 1179 aa18.16■□□□□ 0.5
CEACAM1-205ENST00000377806 RAB3GAP2Q9H2M9 1393 aa18.16■□□□□ 0.5
CEACAM1-205ENST00000377806 CDK13Q14004 1512 aaKnown RBP18.15■□□□□ 0.5
CEACAM1-205ENST00000377806 FAM50AQ14320 339 aaKnown RBP18.15■□□□□ 0.5
CEACAM1-205ENST00000377806 ANP32EQ9BTT0 268 aa18.15■□□□□ 0.5
CEACAM1-205ENST00000377806 SETD5Q9C0A6 1442 aa18.15■□□□□ 0.5
CEACAM1-205ENST00000377806 RAPGEF6Q8TEU7 1601 aa18.13■□□□□ 0.49
CEACAM1-205ENST00000377806 NUP153P49790 1475 aaKnown RBP18.13■□□□□ 0.49
CEACAM1-205ENST00000377806 TCOF1Q13428 1488 aaKnown RBP18.09■□□□□ 0.49
CEACAM1-205ENST00000377806 JPH4Q96JJ6 628 aa18.08■□□□□ 0.48
CEACAM1-205ENST00000377806 PTPRKQ15262 1439 aa18.08■□□□□ 0.48
CEACAM1-205ENST00000377806 PTPN23Q9H3S7 1636 aa18.07■□□□□ 0.48
CEACAM1-205ENST00000377806 CYB5RLQ6IPT4 315 aa18.07■□□□□ 0.48
CEACAM1-205ENST00000377806 MAPKBP1O60336 1514 aa18.07■□□□□ 0.48
CEACAM1-205ENST00000377806 PRG4Q92954 1404 aaPredicted RBP18.07■□□□□ 0.48
CEACAM1-205ENST00000377806 CARMIL2Q6F5E8 1435 aa18.06■□□□□ 0.48
CEACAM1-205ENST00000377806 PLB1Q6P1J6 1458 aa18.03■□□□□ 0.48
CEACAM1-205ENST00000377806 MIA2Q96PC5 1412 aa18.03■□□□□ 0.48
CEACAM1-205ENST00000377806 HFM1A2PYH4 1435 aa18.01■□□□□ 0.47
CEACAM1-205ENST00000377806 ABCA8O94911 1581 aa18■□□□□ 0.47
CEACAM1-205ENST00000377806 ZNF316A6NFI3 1004 aaPredicted RBP17.99■□□□□ 0.47
CEACAM1-205ENST00000377806 ACIN1Q9UKV3 1341 aaKnown RBP17.99■□□□□ 0.47
CEACAM1-205ENST00000377806 ARID3CA6NKF2 412 aa17.98■□□□□ 0.47
CEACAM1-205ENST00000377806 TROQ12816 1431 aaPredicted RBP17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms