RNA–Protein interactions for RNA: ENST00000377507.7

TNFRSF9-201, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF9, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-201ENST00000377507 NESP48681 1621 aa17.31■□□□□ 0.36
TNFRSF9-201ENST00000377507 LAMC3Q9Y6N6 1575 aa17.3■□□□□ 0.36
TNFRSF9-201ENST00000377507 CUL7Q14999 1698 aa17.3■□□□□ 0.36
TNFRSF9-201ENST00000377507 EFCAB5A4FU69 1503 aa17.29■□□□□ 0.36
TNFRSF9-201ENST00000377507 CFAP43Q8NDM7 1665 aa17.28■□□□□ 0.36
TNFRSF9-201ENST00000377507 MIER1Q8N108 512 aa17.27■□□□□ 0.35
TNFRSF9-201ENST00000377507 AQRO60306 1485 aaKnown RBP eCLIP17.26■□□□□ 0.35
TNFRSF9-201ENST00000377507 PCF11O94913 1555 aaKnown RBP17.25■□□□□ 0.35
TNFRSF9-201ENST00000377507 WDR97A6NE52 1622 aa17.25■□□□□ 0.35
TNFRSF9-201ENST00000377507 PHLDB1Q86UU1 1377 aa17.24■□□□□ 0.35
TNFRSF9-201ENST00000377507 URB2Q14146 1524 aaKnown RBP17.24■□□□□ 0.35
TNFRSF9-201ENST00000377507 FYCO1Q9BQS8 1478 aa17.23■□□□□ 0.35
TNFRSF9-201ENST00000377507 CASKIN1Q8WXD9 1431 aa17.23■□□□□ 0.35
TNFRSF9-201ENST00000377507 RAB3GAP2Q9H2M9 1393 aa17.22■□□□□ 0.35
TNFRSF9-201ENST00000377507 PELP1Q8IZL8 1130 aaKnown RBP17.21■□□□□ 0.35
TNFRSF9-201ENST00000377507 CTTNBP2Q8WZ74 1663 aa17.21■□□□□ 0.35
TNFRSF9-201ENST00000377507 GTF3C3Q9Y5Q9 886 aa17.2■□□□□ 0.34
TNFRSF9-201ENST00000377507 FHOD3Q2V2M9 1422 aa17.2■□□□□ 0.34
TNFRSF9-201ENST00000377507 SETD5Q9C0A6 1442 aa17.19■□□□□ 0.34
TNFRSF9-201ENST00000377507 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.19■□□□□ 0.34
TNFRSF9-201ENST00000377507 ABCA5Q8WWZ7 1642 aa17.19■□□□□ 0.34
TNFRSF9-201ENST00000377507 MAPKBP1O60336 1514 aa17.17■□□□□ 0.34
TNFRSF9-201ENST00000377507 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
TNFRSF9-201ENST00000377507 P3H3Q8IVL6 736 aa17.16■□□□□ 0.34
TNFRSF9-201ENST00000377507 FMN1Q68DA7 1419 aa17.16■□□□□ 0.34
TNFRSF9-201ENST00000377507 ITGAEP38570 1179 aa17.15■□□□□ 0.34
TNFRSF9-201ENST00000377507 SNAPC4Q5SXM2 1469 aa17.13■□□□□ 0.33
TNFRSF9-201ENST00000377507 SAMD9Q5K651 1589 aa17.13■□□□□ 0.33
TNFRSF9-201ENST00000377507 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
TNFRSF9-201ENST00000377507 TDRD9Q8NDG6 1382 aaKnown RBP17.1■□□□□ 0.33
TNFRSF9-201ENST00000377507 FAM50AQ14320 339 aaKnown RBP17.08■□□□□ 0.32
TNFRSF9-201ENST00000377507 YTHDC1Q96MU7 727 aaKnown RBP17.07■□□□□ 0.32
TNFRSF9-201ENST00000377507 TARBP1Q13395 1621 aaKnown RBP17.06■□□□□ 0.32
TNFRSF9-201ENST00000377507 ATP1B4Q9UN42 357 aaPredicted RBP17.05■□□□□ 0.32
TNFRSF9-201ENST00000377507 TIMELESSQ9UNS1 1208 aa17.05■□□□□ 0.32
TNFRSF9-201ENST00000377507 THOC2Q8NI27 1593 aaKnown RBP17.04■□□□□ 0.32
TNFRSF9-201ENST00000377507 GRIN2BQ13224 1484 aa17.04■□□□□ 0.32
TNFRSF9-201ENST00000377507 FGD6Q6ZV73 1430 aa17.04■□□□□ 0.32
TNFRSF9-201ENST00000377507 KIF21AQ7Z4S6 1674 aa17.04■□□□□ 0.32
TNFRSF9-201ENST00000377507 DNAJC5BQ9UF47 199 aa17.02■□□□□ 0.32
TNFRSF9-201ENST00000377507 LRRIQ1Q96JM4 1722 aa17■□□□□ 0.31
TNFRSF9-201ENST00000377507 MTUS2Q5JR59 1369 aa16.98■□□□□ 0.31
TNFRSF9-201ENST00000377507 HFM1A2PYH4 1435 aa16.95■□□□□ 0.3
TNFRSF9-201ENST00000377507 NCOA2Q15596 1464 aa16.95■□□□□ 0.3
TNFRSF9-201ENST00000377507 ARHGEF11O15085 1522 aa16.95■□□□□ 0.3
TNFRSF9-201ENST00000377507 EHBP1L1Q8N3D4 1523 aa16.95■□□□□ 0.3
TNFRSF9-201ENST00000377507 MYOM3Q5VTT5 1437 aa16.94■□□□□ 0.3
TNFRSF9-201ENST00000377507 SIN3AQ96ST3 1273 aa16.94■□□□□ 0.3
TNFRSF9-201ENST00000377507 PTPRKQ15262 1439 aa16.93■□□□□ 0.3
TNFRSF9-201ENST00000377507 PBRM1Q86U86 1689 aa16.92■□□□□ 0.3
TNFRSF9-201ENST00000377507 SUPT6HQ7KZ85 1726 aaKnown RBP16.92■□□□□ 0.3
TNFRSF9-201ENST00000377507 CCDC18Q5T9S5 1454 aa16.91■□□□□ 0.3
TNFRSF9-201ENST00000377507 UGGT2Q9NYU1 1516 aa16.91■□□□□ 0.3
TNFRSF9-201ENST00000377507 UACAQ9BZF9 1416 aa16.9■□□□□ 0.3
TNFRSF9-201ENST00000377507 MRC2Q9UBG0 1479 aa16.9■□□□□ 0.3
TNFRSF9-201ENST00000377507 ADAMTS12P58397 1594 aa16.9■□□□□ 0.3
TNFRSF9-201ENST00000377507 PPP1R15AO75807 674 aaPredicted RBP16.89■□□□□ 0.29
TNFRSF9-201ENST00000377507 PTPN23Q9H3S7 1636 aa16.89■□□□□ 0.29
TNFRSF9-201ENST00000377507 IQGAP2Q13576 1575 aa16.88■□□□□ 0.29
TNFRSF9-201ENST00000377507 MAGI3Q5TCQ9 1506 aa16.88■□□□□ 0.29
TNFRSF9-201ENST00000377507 NAIPQ13075 1403 aa16.88■□□□□ 0.29
TNFRSF9-201ENST00000377507 TCOF1Q13428 1488 aaKnown RBP16.87■□□□□ 0.29
TNFRSF9-201ENST00000377507 HECW1Q76N89 1606 aa16.86■□□□□ 0.29
TNFRSF9-201ENST00000377507 EPRSP07814 1512 aaKnown RBP16.83■□□□□ 0.28
TNFRSF9-201ENST00000377507 IFT140Q96RY7 1462 aa16.82■□□□□ 0.28
TNFRSF9-201ENST00000377507 AKNAQ7Z591 1439 aa16.81■□□□□ 0.28
TNFRSF9-201ENST00000377507 WDR62O43379 1518 aa16.8■□□□□ 0.28
TNFRSF9-201ENST00000377507 MIA2Q96PC5 1412 aa16.79■□□□□ 0.28
TNFRSF9-201ENST00000377507 TONSLQ96HA7 1378 aa16.77■□□□□ 0.27
TNFRSF9-201ENST00000377507 KIAA0586Q9BVV6 1533 aa16.76■□□□□ 0.27
TNFRSF9-201ENST00000377507 GCC2Q8IWJ2 1684 aa16.75■□□□□ 0.27
TNFRSF9-201ENST00000377507 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF9-201ENST00000377507 DDX10Q13206 875 aaKnown RBP16.74■□□□□ 0.27
TNFRSF9-201ENST00000377507 KDM5BQ9UGL1 1544 aa16.73■□□□□ 0.27
TNFRSF9-201ENST00000377507 CDK13Q14004 1512 aaKnown RBP16.73■□□□□ 0.27
TNFRSF9-201ENST00000377507 DISP1Q96F81 1524 aa16.72■□□□□ 0.27
TNFRSF9-201ENST00000377507 DENND4BO75064 1496 aaPredicted RBP16.71■□□□□ 0.27
TNFRSF9-201ENST00000377507 KIAA0556O60303 1618 aa16.71■□□□□ 0.27
TNFRSF9-201ENST00000377507 KCNH8Q96L42 1107 aa16.7■□□□□ 0.26
TNFRSF9-201ENST00000377507 GRIN2AQ12879 1464 aa16.68■□□□□ 0.26
TNFRSF9-201ENST00000377507 CCER2I3L3R5 266 aa16.68■□□□□ 0.26
TNFRSF9-201ENST00000377507 RRP7BPQ9NSQ0 103 aa16.67■□□□□ 0.26
TNFRSF9-201ENST00000377507 SUPT16HQ9Y5B9 1047 aaKnown RBP16.66■□□□□ 0.26
TNFRSF9-201ENST00000377507 ROCK1Q13464 1354 aa16.66■□□□□ 0.26
TNFRSF9-201ENST00000377507 NUP153P49790 1475 aaKnown RBP16.66■□□□□ 0.26
TNFRSF9-201ENST00000377507 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
TNFRSF9-201ENST00000377507 KDM6BO15054 1643 aa16.65■□□□□ 0.26
TNFRSF9-201ENST00000377507 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
TNFRSF9-201ENST00000377507 HIRIP3Q9BW71 556 aaPredicted RBP16.63■□□□□ 0.25
TNFRSF9-201ENST00000377507 RAPGEF6Q8TEU7 1601 aa16.63■□□□□ 0.25
TNFRSF9-201ENST00000377507 MAGI1Q96QZ7 1491 aaPredicted RBP16.62■□□□□ 0.25
TNFRSF9-201ENST00000377507 DAPK1P53355 1430 aa16.62■□□□□ 0.25
TNFRSF9-201ENST00000377507 MPHOSPH9Q99550 1183 aa16.61■□□□□ 0.25
TNFRSF9-201ENST00000377507 DNMT1P26358 1616 aaKnown RBP16.61■□□□□ 0.25
TNFRSF9-201ENST00000377507 ABCC5O15440 1437 aa16.61■□□□□ 0.25
TNFRSF9-201ENST00000377507 ANP32CO43423 234 aa16.6■□□□□ 0.25
TNFRSF9-201ENST00000377507 CDK11AQ9UQ88 783 aaPredicted RBP16.59■□□□□ 0.25
TNFRSF9-201ENST00000377507 SYNJ2O15056 1496 aa16.57■□□□□ 0.24
TNFRSF9-201ENST00000377507 TRIM52Q96A61 297 aa16.57■□□□□ 0.24
TNFRSF9-201ENST00000377507 ARID3CA6NKF2 412 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms