RNA–Protein interactions for RNA: ENST00000377499.9

LMO7-204, Transcript of LIM domain 7, humanhuman

TSL 2

Gene LMO7, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-204ENST00000377499 TARBP1Q13395 1621 aaKnown RBP17.75■□□□□ 0.43
LMO7-204ENST00000377499 BCL11AQ9H165 835 aa17.74■□□□□ 0.43
LMO7-204ENST00000377499 GRIN2BQ13224 1484 aa17.74■□□□□ 0.43
LMO7-204ENST00000377499 CUL7Q14999 1698 aa17.71■□□□□ 0.43
LMO7-204ENST00000377499 ABCA5Q8WWZ7 1642 aa17.71■□□□□ 0.43
LMO7-204ENST00000377499 ARAP1Q96P48 1450 aa17.7■□□□□ 0.42
LMO7-204ENST00000377499 ARHGAP35Q9NRY4 1499 aa17.69■□□□□ 0.42
LMO7-204ENST00000377499 FHAD1B1AJZ9 1412 aa17.69■□□□□ 0.42
LMO7-204ENST00000377499 WDR97A6NE52 1622 aa17.68■□□□□ 0.42
LMO7-204ENST00000377499 THOC2Q8NI27 1593 aaKnown RBP17.67■□□□□ 0.42
LMO7-204ENST00000377499 FHOD3Q2V2M9 1422 aa17.67■□□□□ 0.42
LMO7-204ENST00000377499 HNRNPUL2Q1KMD3 747 aaKnown RBP17.66■□□□□ 0.42
LMO7-204ENST00000377499 SNAPC4Q5SXM2 1469 aa17.66■□□□□ 0.42
LMO7-204ENST00000377499 ARID3CA6NKF2 412 aa17.65■□□□□ 0.42
LMO7-204ENST00000377499 KANK4Q5T7N3 995 aaPredicted RBP17.63■□□□□ 0.41
LMO7-204ENST00000377499 PBRM1Q86U86 1689 aa17.6■□□□□ 0.41
LMO7-204ENST00000377499 EIF4G3O43432 1585 aaKnown RBP17.6■□□□□ 0.41
LMO7-204ENST00000377499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.59■□□□□ 0.41
LMO7-204ENST00000377499 ITGAEP38570 1179 aa17.59■□□□□ 0.41
LMO7-204ENST00000377499 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
LMO7-204ENST00000377499 ADAMTS12P58397 1594 aa17.54■□□□□ 0.4
LMO7-204ENST00000377499 CTTNBP2Q8WZ74 1663 aa17.51■□□□□ 0.39
LMO7-204ENST00000377499 GRIN2AQ12879 1464 aa17.5■□□□□ 0.39
LMO7-204ENST00000377499 MAGI1Q96QZ7 1491 aaPredicted RBP17.49■□□□□ 0.39
LMO7-204ENST00000377499 FMN1Q68DA7 1419 aa17.49■□□□□ 0.39
LMO7-204ENST00000377499 SYNJ2O15056 1496 aa17.48■□□□□ 0.39
LMO7-204ENST00000377499 JPH4Q96JJ6 628 aa17.48■□□□□ 0.39
LMO7-204ENST00000377499 FAM50AQ14320 339 aaKnown RBP17.47■□□□□ 0.39
LMO7-204ENST00000377499 EFCAB5A4FU69 1503 aa17.47■□□□□ 0.39
LMO7-204ENST00000377499 IQGAP2Q13576 1575 aa17.46■□□□□ 0.38
LMO7-204ENST00000377499 MTUS2Q5JR59 1369 aa17.44■□□□□ 0.38
LMO7-204ENST00000377499 KIAA0586Q9BVV6 1533 aa17.43■□□□□ 0.38
LMO7-204ENST00000377499 PCF11O94913 1555 aaKnown RBP17.4■□□□□ 0.38
LMO7-204ENST00000377499 CASKIN1Q8WXD9 1431 aa17.39■□□□□ 0.37
LMO7-204ENST00000377499 GTF3C3Q9Y5Q9 886 aa17.38■□□□□ 0.37
LMO7-204ENST00000377499 CARMIL2Q6F5E8 1435 aa17.37■□□□□ 0.37
LMO7-204ENST00000377499 FYCO1Q9BQS8 1478 aa17.35■□□□□ 0.37
LMO7-204ENST00000377499 ZEB1P37275 1124 aaPredicted RBP17.35■□□□□ 0.37
LMO7-204ENST00000377499 TIAM1Q13009 1591 aa17.34■□□□□ 0.37
LMO7-204ENST00000377499 LRRC9Q6ZRR7 1453 aa17.33■□□□□ 0.37
LMO7-204ENST00000377499 CEP170Q5SW79 1584 aa17.31■□□□□ 0.36
LMO7-204ENST00000377499 CCNB3Q8WWL7 1395 aa17.31■□□□□ 0.36
LMO7-204ENST00000377499 SAMD9Q5K651 1589 aa17.31■□□□□ 0.36
LMO7-204ENST00000377499 CDK11AQ9UQ88 783 aaPredicted RBP17.31■□□□□ 0.36
LMO7-204ENST00000377499 CENPBP07199 599 aaPredicted RBP17.3■□□□□ 0.36
LMO7-204ENST00000377499 UGGT2Q9NYU1 1516 aa17.28■□□□□ 0.36
LMO7-204ENST00000377499 NUP160Q12769 1436 aa17.27■□□□□ 0.36
LMO7-204ENST00000377499 PRG4Q92954 1404 aaPredicted RBP17.27■□□□□ 0.35
LMO7-204ENST00000377499 PHLDB1Q86UU1 1377 aa17.26■□□□□ 0.35
LMO7-204ENST00000377499 NEUROD1Q13562 356 aa17.26■□□□□ 0.35
LMO7-204ENST00000377499 ERICH6Q7L0X2 663 aa17.26■□□□□ 0.35
LMO7-204ENST00000377499 DISP1Q96F81 1524 aa17.25■□□□□ 0.35
LMO7-204ENST00000377499 KIAA0556O60303 1618 aa17.23■□□□□ 0.35
LMO7-204ENST00000377499 ACIN1Q9UKV3 1341 aaKnown RBP17.22■□□□□ 0.35
LMO7-204ENST00000377499 MAP3K1Q13233 1512 aa17.22■□□□□ 0.35
LMO7-204ENST00000377499 PTPRGP23470 1445 aa17.22■□□□□ 0.35
LMO7-204ENST00000377499 CDK13Q14004 1512 aaKnown RBP17.22■□□□□ 0.35
LMO7-204ENST00000377499 PLB1Q6P1J6 1458 aa17.2■□□□□ 0.34
LMO7-204ENST00000377499 PLEKHD1A6NEE1 506 aa17.2■□□□□ 0.34
LMO7-204ENST00000377499 ZNF777Q9ULD5 760 aaPredicted RBP17.2■□□□□ 0.34
LMO7-204ENST00000377499 CHD1O14646 1710 aa17.19■□□□□ 0.34
LMO7-204ENST00000377499 EPRSP07814 1512 aaKnown RBP17.19■□□□□ 0.34
LMO7-204ENST00000377499 HECW1Q76N89 1606 aa17.19■□□□□ 0.34
LMO7-204ENST00000377499 CCDC18Q5T9S5 1454 aa17.18■□□□□ 0.34
LMO7-204ENST00000377499 RRBP1Q9P2E9 1410 aaKnown RBP17.17■□□□□ 0.34
LMO7-204ENST00000377499 CHIC2Q9UKJ5 165 aa17.16■□□□□ 0.34
LMO7-204ENST00000377499 CFAP43Q8NDM7 1665 aa17.15■□□□□ 0.34
LMO7-204ENST00000377499 NCOA2Q15596 1464 aa17.15■□□□□ 0.34
LMO7-204ENST00000377499 OSCARQ8IYS5 282 aa17.14■□□□□ 0.33
LMO7-204ENST00000377499 KCNH8Q96L42 1107 aa17.12■□□□□ 0.33
LMO7-204ENST00000377499 NUP153P49790 1475 aaKnown RBP17.11■□□□□ 0.33
LMO7-204ENST00000377499 RAPGEF6Q8TEU7 1601 aa17.1■□□□□ 0.33
LMO7-204ENST00000377499 EHBP1L1Q8N3D4 1523 aa17.1■□□□□ 0.33
LMO7-204ENST00000377499 FGD6Q6ZV73 1430 aa17.09■□□□□ 0.33
LMO7-204ENST00000377499 CFDP1Q9UEE9 299 aaPredicted RBP17.09■□□□□ 0.33
LMO7-204ENST00000377499 MYOM3Q5VTT5 1437 aa17.07■□□□□ 0.32
LMO7-204ENST00000377499 RRP7BPQ9NSQ0 103 aa17.07■□□□□ 0.32
LMO7-204ENST00000377499 SUPT6HQ7KZ85 1726 aaKnown RBP17.06■□□□□ 0.32
LMO7-204ENST00000377499 MAGI3Q5TCQ9 1506 aa17.05■□□□□ 0.32
LMO7-204ENST00000377499 LRRIQ1Q96JM4 1722 aa17.04■□□□□ 0.32
LMO7-204ENST00000377499 ZNF644Q9H582 1327 aaPredicted RBP17.02■□□□□ 0.32
LMO7-204ENST00000377499 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.32
LMO7-204ENST00000377499 TRIM52Q96A61 297 aa17.01■□□□□ 0.31
LMO7-204ENST00000377499 UACAQ9BZF9 1416 aa17.01■□□□□ 0.31
LMO7-204ENST00000377499 TROQ12816 1431 aaPredicted RBP17.01■□□□□ 0.31
LMO7-204ENST00000377499 ERCC6L2Q5T890 1561 aa17■□□□□ 0.31
LMO7-204ENST00000377499 SETD5Q9C0A6 1442 aa17■□□□□ 0.31
LMO7-204ENST00000377499 NPM1P06748 294 aaKnown RBP eCLIP16.99■□□□□ 0.31
LMO7-204ENST00000377499 ATP10BO94823 1461 aa16.99■□□□□ 0.31
LMO7-204ENST00000377499 ABCA8O94911 1581 aa16.93■□□□□ 0.3
LMO7-204ENST00000377499 DHX57Q6P158 1386 aaKnown RBP16.93■□□□□ 0.3
LMO7-204ENST00000377499 PTPN23Q9H3S7 1636 aa16.92■□□□□ 0.3
LMO7-204ENST00000377499 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.91■□□□□ 0.3
LMO7-204ENST00000377499 MYT1LQ9UL68 1186 aa16.9■□□□□ 0.3
LMO7-204ENST00000377499 TSPY4P0CV99 314 aa16.9■□□□□ 0.3
LMO7-204ENST00000377499 TSPY10P0CW01 314 aa16.9■□□□□ 0.3
LMO7-204ENST00000377499 MIA2Q96PC5 1412 aa16.9■□□□□ 0.3
LMO7-204ENST00000377499 CLASP1Q7Z460 1538 aa16.9■□□□□ 0.3
LMO7-204ENST00000377499 HNRNPMP52272 730 aaKnown RBP eCLIP16.89■□□□□ 0.297e-6■□□□□ 9.7
LMO7-204ENST00000377499 ARHGEF11O15085 1522 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms