RNA–Protein interactions for RNA: ENST00000377139.7

IRF3-203, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-203ENST00000377139 ARHGAP35Q9NRY4 1499 aa28.6■■■□□ 2.17
IRF3-203ENST00000377139 VPS8Q8N3P4 1428 aa28.59■■■□□ 2.17
IRF3-203ENST00000377139 ARAP1Q96P48 1450 aa28.57■■■□□ 2.16
IRF3-203ENST00000377139 EFCAB5A4FU69 1503 aa28.57■■■□□ 2.16
IRF3-203ENST00000377139 CHMP7Q8WUX9 453 aaPredicted RBP28.54■■■□□ 2.16
IRF3-203ENST00000377139 IQGAP2Q13576 1575 aa28.53■■■□□ 2.16
IRF3-203ENST00000377139 KIAA0586Q9BVV6 1533 aa28.48■■■□□ 2.15
IRF3-203ENST00000377139 SAMD9Q5K651 1589 aa28.46■■■□□ 2.15
IRF3-203ENST00000377139 NUP160Q12769 1436 aa28.43■■■□□ 2.14
IRF3-203ENST00000377139 CEP170Q5SW79 1584 aa28.43■■■□□ 2.14
IRF3-203ENST00000377139 FBLN2P98095 1184 aa28.43■■■□□ 2.14
IRF3-203ENST00000377139 UGGT2Q9NYU1 1516 aa28.38■■■□□ 2.13
IRF3-203ENST00000377139 CHD1O14646 1710 aa28.38■■■□□ 2.13
IRF3-203ENST00000377139 FHOD3Q2V2M9 1422 aa28.33■■■□□ 2.13
IRF3-203ENST00000377139 APLP2Q06481 763 aa28.29■■■□□ 2.12
IRF3-203ENST00000377139 P3H3Q8IVL6 736 aa28.29■■■□□ 2.12
IRF3-203ENST00000377139 FMN1Q68DA7 1419 aa28.29■■■□□ 2.12
IRF3-203ENST00000377139 KIAA0556O60303 1618 aa28.23■■■□□ 2.11
IRF3-203ENST00000377139 PCF11O94913 1555 aaKnown RBP28.21■■■□□ 2.11
IRF3-203ENST00000377139 TRIM26Q12899 539 aaPredicted RBP28.21■■■□□ 2.11
IRF3-203ENST00000377139 DISP1Q96F81 1524 aa28.2■■■□□ 2.11
IRF3-203ENST00000377139 FYCO1Q9BQS8 1478 aa28.2■■■□□ 2.11
IRF3-203ENST00000377139 CASKIN1Q8WXD9 1431 aa28.19■■■□□ 2.1
IRF3-203ENST00000377139 MAP3K1Q13233 1512 aa28.17■■■□□ 2.1
IRF3-203ENST00000377139 PPARGC1BQ86YN6 1023 aaKnown RBP28.17■■■□□ 2.1
IRF3-203ENST00000377139 JPH4Q96JJ6 628 aa28.15■■■□□ 2.1
IRF3-203ENST00000377139 CARMIL2Q6F5E8 1435 aa28.14■■■□□ 2.1
IRF3-203ENST00000377139 TIAM1Q13009 1591 aa28.1■■■□□ 2.09
IRF3-203ENST00000377139 CFAP43Q8NDM7 1665 aa28.09■■■□□ 2.09
IRF3-203ENST00000377139 SHROOM2Q13796 1616 aa28.08■■■□□ 2.09
IRF3-203ENST00000377139 CLASP1Q7Z460 1538 aa28.07■■■□□ 2.08
IRF3-203ENST00000377139 PCGF6Q9BYE7 350 aa28.07■■■□□ 2.08
IRF3-203ENST00000377139 HECW1Q76N89 1606 aa28.04■■■□□ 2.08
IRF3-203ENST00000377139 PRG4Q92954 1404 aaPredicted RBP28■■■□□ 2.07
IRF3-203ENST00000377139 ATP1B4Q9UN42 357 aaPredicted RBP28■■■□□ 2.07
IRF3-203ENST00000377139 TTBK1Q5TCY1 1321 aaPredicted RBP27.99■■■□□ 2.07
IRF3-203ENST00000377139 CCDC18Q5T9S5 1454 aa27.96■■■□□ 2.07
IRF3-203ENST00000377139 KANK4Q5T7N3 995 aaPredicted RBP27.96■■■□□ 2.07
IRF3-203ENST00000377139 LRRC9Q6ZRR7 1453 aa27.95■■■□□ 2.06
IRF3-203ENST00000377139 LRRIQ1Q96JM4 1722 aa27.95■■■□□ 2.06
IRF3-203ENST00000377139 RAPGEF6Q8TEU7 1601 aa27.94■■■□□ 2.06
IRF3-203ENST00000377139 EPRSP07814 1512 aaKnown RBP27.87■■■□□ 2.05
IRF3-203ENST00000377139 PTPRGP23470 1445 aa27.83■■■□□ 2.05
IRF3-203ENST00000377139 NUP153P49790 1475 aaKnown RBP27.83■■■□□ 2.05
IRF3-203ENST00000377139 OSCARQ8IYS5 282 aa27.82■■■□□ 2.04
IRF3-203ENST00000377139 PLB1Q6P1J6 1458 aa27.82■■■□□ 2.04
IRF3-203ENST00000377139 ABCA8O94911 1581 aa27.82■■■□□ 2.04
IRF3-203ENST00000377139 EHBP1L1Q8N3D4 1523 aa27.8■■■□□ 2.04
IRF3-203ENST00000377139 MTUS2Q5JR59 1369 aa27.79■■■□□ 2.04
IRF3-203ENST00000377139 ERCC6L2Q5T890 1561 aa27.79■■■□□ 2.04
IRF3-203ENST00000377139 CDK13Q14004 1512 aaKnown RBP27.77■■■□□ 2.04
IRF3-203ENST00000377139 SUPT6HQ7KZ85 1726 aaKnown RBP27.72■■■□□ 2.03
IRF3-203ENST00000377139 RRBP1Q9P2E9 1410 aaKnown RBP27.7■■■□□ 2.03
IRF3-203ENST00000377139 MAGI3Q5TCQ9 1506 aa27.7■■■□□ 2.02
IRF3-203ENST00000377139 UACAQ9BZF9 1416 aa27.68■■■□□ 2.02
IRF3-203ENST00000377139 CDK11AQ9UQ88 783 aaPredicted RBP27.67■■■□□ 2.02
IRF3-203ENST00000377139 PHLDB1Q86UU1 1377 aa27.64■■■□□ 2.02
IRF3-203ENST00000377139 ABCC2Q92887 1545 aa27.63■■■□□ 2.01
IRF3-203ENST00000377139 ARID3CA6NKF2 412 aa27.63■■■□□ 2.01
IRF3-203ENST00000377139 NCOA2Q15596 1464 aa27.62■■■□□ 2.01
IRF3-203ENST00000377139 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.61■■■□□ 2.01
IRF3-203ENST00000377139 HNRNPUL2Q1KMD3 747 aaKnown RBP27.61■■■□□ 2.01
IRF3-203ENST00000377139 CCNB3Q8WWL7 1395 aa27.61■■■□□ 2.01
IRF3-203ENST00000377139 ARHGEF11O15085 1522 aa27.6■■■□□ 2.01
IRF3-203ENST00000377139 ATP10BO94823 1461 aa27.6■■■□□ 2.01
IRF3-203ENST00000377139 UHRF1BP1LA0JNW5 1464 aa27.58■■■□□ 2.01
IRF3-203ENST00000377139 TROQ12816 1431 aaPredicted RBP27.57■■■□□ 2
IRF3-203ENST00000377139 ADCY10Q96PN6 1610 aa27.53■■■□□ 2
IRF3-203ENST00000377139 MYOM3Q5VTT5 1437 aa27.53■■■□□ 2
IRF3-203ENST00000377139 FGD6Q6ZV73 1430 aa27.5■■□□□ 1.99
IRF3-203ENST00000377139 PLEKHD1A6NEE1 506 aa27.49■■□□□ 1.99
IRF3-203ENST00000377139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP27.49■■□□□ 1.993e-6■□□□□ 11.3
IRF3-203ENST00000377139 KDM5BQ9UGL1 1544 aa27.45■■□□□ 1.98
IRF3-203ENST00000377139 KIF14Q15058 1648 aa27.44■■□□□ 1.98
IRF3-203ENST00000377139 ZCCHC11Q5TAX3 1644 aaKnown RBP27.43■■□□□ 1.98
IRF3-203ENST00000377139 MIA2Q96PC5 1412 aa27.42■■□□□ 1.98
IRF3-203ENST00000377139 ITSN2Q9NZM3 1697 aa27.4■■□□□ 1.98
IRF3-203ENST00000377139 PTPN23Q9H3S7 1636 aa27.39■■□□□ 1.98
IRF3-203ENST00000377139 FAM50AQ14320 339 aaKnown RBP27.38■■□□□ 1.97
IRF3-203ENST00000377139 TCOF1Q13428 1488 aaKnown RBP27.36■■□□□ 1.97
IRF3-203ENST00000377139 ABCC10Q5T3U5 1492 aa27.32■■□□□ 1.96
IRF3-203ENST00000377139 GPATCH8Q9UKJ3 1502 aaKnown RBP27.29■■□□□ 1.96
IRF3-203ENST00000377139 CDC42BPAQ5VT25 1732 aa27.27■■□□□ 1.96
IRF3-203ENST00000377139 ITGAEP38570 1179 aa27.26■■□□□ 1.95
IRF3-203ENST00000377139 RIMBP3CA6NJZ7 1639 aa27.25■■□□□ 1.95
IRF3-203ENST00000377139 RIMBP3BA6NNM3 1639 aa27.25■■□□□ 1.95
IRF3-203ENST00000377139 RIMBP3Q9UFD9 1639 aa27.25■■□□□ 1.95
IRF3-203ENST00000377139 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP27.2■■□□□ 1.953e-7■□□□□ 11.1
IRF3-203ENST00000377139 WDR7Q9Y4E6 1490 aa27.2■■□□□ 1.95
IRF3-203ENST00000377139 CFDP1Q9UEE9 299 aaPredicted RBP27.2■■□□□ 1.95
IRF3-203ENST00000377139 PREX2Q70Z35 1606 aa27.19■■□□□ 1.94
IRF3-203ENST00000377139 NPM1P06748 294 aaKnown RBP eCLIP27.19■■□□□ 1.94
IRF3-203ENST00000377139 TTC37Q6PGP7 1564 aa27.17■■□□□ 1.94
IRF3-203ENST00000377139 HRCP23327 699 aa27.17■■□□□ 1.94
IRF3-203ENST00000377139 CAMSAP2Q08AD1 1489 aa27.16■■□□□ 1.94
IRF3-203ENST00000377139 MYO5CQ9NQX4 1742 aa27.15■■□□□ 1.94
IRF3-203ENST00000377139 DNMT1P26358 1616 aaKnown RBP27.14■■□□□ 1.94
IRF3-203ENST00000377139 CDC42BPBQ9Y5S2 1711 aa27.13■■□□□ 1.93
IRF3-203ENST00000377139 ASXL2Q76L83 1435 aa27.13■■□□□ 1.93
IRF3-203ENST00000377139 KCNH8Q96L42 1107 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms