RNA–Protein interactions for RNA: ENST00000377012.8

GABBR1-203, Transcript of gamma-aminobutyric acid type B receptor subunit 1, humanhuman

TSL 1 (best) BASIC

Gene GABBR1, Length 4,104 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABBR1-203ENST00000377012 DHX57Q6P158 1386 aaKnown RBP17.02■□□□□ 0.32
GABBR1-203ENST00000377012 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.32
GABBR1-203ENST00000377012 SUPT16HQ9Y5B9 1047 aaKnown RBP17.01■□□□□ 0.31
GABBR1-203ENST00000377012 SYNJ1O43426 1573 aa17■□□□□ 0.31
GABBR1-203ENST00000377012 CDK11AQ9UQ88 783 aaPredicted RBP16.93■□□□□ 0.3
GABBR1-203ENST00000377012 KIF21BO75037 1637 aa16.93■□□□□ 0.3
GABBR1-203ENST00000377012 SETD5Q9C0A6 1442 aa16.92■□□□□ 0.3
GABBR1-203ENST00000377012 TDRD9Q8NDG6 1382 aaKnown RBP16.91■□□□□ 0.3
GABBR1-203ENST00000377012 FHOD3Q2V2M9 1422 aa16.89■□□□□ 0.29
GABBR1-203ENST00000377012 SALL2Q9Y467 1007 aaPredicted RBP16.88■□□□□ 0.29
GABBR1-203ENST00000377012 FOXD1Q16676 465 aa16.88■□□□□ 0.29
GABBR1-203ENST00000377012 MRS2Q9HD23 443 aa16.88■□□□□ 0.29
GABBR1-203ENST00000377012 FHAD1B1AJZ9 1412 aa16.87■□□□□ 0.29
GABBR1-203ENST00000377012 SLC4A1APQ9BWU0 796 aaKnown RBP16.87■□□□□ 0.29
GABBR1-203ENST00000377012 KDM2AQ9Y2K7 1162 aa16.86■□□□□ 0.29
GABBR1-203ENST00000377012 EIF4G2P78344 907 aaKnown RBP eCLIP16.86■□□□□ 0.29
GABBR1-203ENST00000377012 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
GABBR1-203ENST00000377012 ARAP1Q96P48 1450 aa16.85■□□□□ 0.29
GABBR1-203ENST00000377012 IGF1RP08069 1367 aa16.83■□□□□ 0.29
GABBR1-203ENST00000377012 EIF4G1Q04637 1599 aaKnown RBP16.8■□□□□ 0.28
GABBR1-203ENST00000377012 PPP1R15AO75807 674 aaPredicted RBP16.8■□□□□ 0.28
GABBR1-203ENST00000377012 ARHGAP35Q9NRY4 1499 aa16.78■□□□□ 0.28
GABBR1-203ENST00000377012 CHMP7Q8WUX9 453 aaPredicted RBP16.78■□□□□ 0.28
GABBR1-203ENST00000377012 BICRAQ9NZM4 1560 aa16.77■□□□□ 0.28
GABBR1-203ENST00000377012 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.77■□□□□ 0.28
GABBR1-203ENST00000377012 PHLDB1Q86UU1 1377 aa16.74■□□□□ 0.27
GABBR1-203ENST00000377012 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
GABBR1-203ENST00000377012 PRXQ9BXM0 1461 aa16.72■□□□□ 0.27
GABBR1-203ENST00000377012 RAD54L2Q9Y4B4 1467 aa16.72■□□□□ 0.27
GABBR1-203ENST00000377012 FGD5Q6ZNL6 1462 aa16.71■□□□□ 0.27
GABBR1-203ENST00000377012 CFDP1Q9UEE9 299 aaPredicted RBP16.71■□□□□ 0.27
GABBR1-203ENST00000377012 TMC1Q8TDI8 760 aa16.7■□□□□ 0.26
GABBR1-203ENST00000377012 NCAPD3P42695 1498 aa16.69■□□□□ 0.26
GABBR1-203ENST00000377012 CUX1P39880 1505 aa16.68■□□□□ 0.26
GABBR1-203ENST00000377012 RGL3Q3MIN7 710 aa16.68■□□□□ 0.26
GABBR1-203ENST00000377012 TSPY4P0CV99 314 aa16.68■□□□□ 0.26
GABBR1-203ENST00000377012 TSPY10P0CW01 314 aa16.68■□□□□ 0.26
GABBR1-203ENST00000377012 TSHZ2Q9NRE2 1034 aa16.68■□□□□ 0.26
GABBR1-203ENST00000377012 TIMELESSQ9UNS1 1208 aa16.67■□□□□ 0.26
GABBR1-203ENST00000377012 FANCD2Q9BXW9 1451 aa16.66■□□□□ 0.26
GABBR1-203ENST00000377012 NPM2Q86SE8 214 aaKnown RBP16.66■□□□□ 0.26
GABBR1-203ENST00000377012 TOP2BQ02880 1626 aa16.65■□□□□ 0.26
GABBR1-203ENST00000377012 UNC13AQ9UPW8 1703 aa16.63■□□□□ 0.25
GABBR1-203ENST00000377012 MPHOSPH9Q99550 1183 aa16.63■□□□□ 0.25
GABBR1-203ENST00000377012 FMN1Q68DA7 1419 aa16.63■□□□□ 0.25
GABBR1-203ENST00000377012 L3MBTL2Q969R5 705 aa16.63■□□□□ 0.25
GABBR1-203ENST00000377012 CCER2I3L3R5 266 aa16.62■□□□□ 0.25
GABBR1-203ENST00000377012 CCDC136Q96JN2 1154 aa16.62■□□□□ 0.25
GABBR1-203ENST00000377012 DAXXQ9UER7 740 aaPredicted RBP16.62■□□□□ 0.25
GABBR1-203ENST00000377012 CFTRP13569 1480 aa16.61■□□□□ 0.25
GABBR1-203ENST00000377012 B4GALNT3Q6L9W6 998 aa16.61■□□□□ 0.25
GABBR1-203ENST00000377012 RRBP1Q9P2E9 1410 aaKnown RBP16.61■□□□□ 0.25
GABBR1-203ENST00000377012 PLEKHD1A6NEE1 506 aa16.6■□□□□ 0.25
GABBR1-203ENST00000377012 ERICH3Q5RHP9 1530 aa16.59■□□□□ 0.25
GABBR1-203ENST00000377012 LRRC9Q6ZRR7 1453 aa16.59■□□□□ 0.25
GABBR1-203ENST00000377012 RTL5Q5HYW3 569 aaPredicted RBP16.59■□□□□ 0.25
GABBR1-203ENST00000377012 ANP32EQ9BTT0 268 aa16.57■□□□□ 0.24
GABBR1-203ENST00000377012 CARD11Q9BXL7 1154 aa16.56■□□□□ 0.24
GABBR1-203ENST00000377012 RBM19Q9Y4C8 960 aaKnown RBP16.56■□□□□ 0.24
GABBR1-203ENST00000377012 NBR1Q14596 966 aa16.54■□□□□ 0.24
GABBR1-203ENST00000377012 BCL11AQ9H165 835 aa16.54■□□□□ 0.24
GABBR1-203ENST00000377012 NESP48681 1621 aa16.53■□□□□ 0.24
GABBR1-203ENST00000377012 PKD2Q13563 968 aa16.52■□□□□ 0.24
GABBR1-203ENST00000377012 CCDC18Q5T9S5 1454 aa16.51■□□□□ 0.23
GABBR1-203ENST00000377012 PLPPR3Q6T4P5 718 aa16.51■□□□□ 0.23
GABBR1-203ENST00000377012 SENP3Q9H4L4 574 aaPredicted RBP16.51■□□□□ 0.23
GABBR1-203ENST00000377012 ANP32AP39687 249 aaKnown RBP16.5■□□□□ 0.23
GABBR1-203ENST00000377012 PDS5BQ9NTI5 1447 aa16.5■□□□□ 0.23
GABBR1-203ENST00000377012 CHGAP10645 457 aaKnown RBP16.5■□□□□ 0.23
GABBR1-203ENST00000377012 DNAJC5BQ9UF47 199 aa16.5■□□□□ 0.23
GABBR1-203ENST00000377012 ZNF644Q9H582 1327 aaPredicted RBP16.5■□□□□ 0.23
GABBR1-203ENST00000377012 DCAF11Q8TEB1 546 aa16.49■□□□□ 0.23
GABBR1-203ENST00000377012 FGD6Q6ZV73 1430 aa16.49■□□□□ 0.23
GABBR1-203ENST00000377012 PEG3Q9GZU2 1588 aa16.46■□□□□ 0.23
GABBR1-203ENST00000377012 PPP4R2Q9NY27 417 aa16.45■□□□□ 0.22
GABBR1-203ENST00000377012 WDR97A6NE52 1622 aa16.43■□□□□ 0.22
GABBR1-203ENST00000377012 GAPVD1Q14C86 1478 aa16.42■□□□□ 0.22
GABBR1-203ENST00000377012 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
GABBR1-203ENST00000377012 TIAM1Q13009 1591 aa16.41■□□□□ 0.22
GABBR1-203ENST00000377012 HMGXB3Q12766 1538 aa16.41■□□□□ 0.22
GABBR1-203ENST00000377012 ERCC6Q03468 1493 aa16.39■□□□□ 0.21
GABBR1-203ENST00000377012 CASKIN1Q8WXD9 1431 aa16.39■□□□□ 0.21
GABBR1-203ENST00000377012 CANXP27824 592 aaKnown RBP16.39■□□□□ 0.21
GABBR1-203ENST00000377012 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.219e-7■■■■■ 29.9
GABBR1-203ENST00000377012 WASHC2AQ641Q2 1341 aa16.38■□□□□ 0.21
GABBR1-203ENST00000377012 HNRNPMP52272 730 aaKnown RBP eCLIP16.38■□□□□ 0.21
GABBR1-203ENST00000377012 POLA1P09884 1462 aaPredicted RBP16.38■□□□□ 0.21
GABBR1-203ENST00000377012 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
GABBR1-203ENST00000377012 MYOM3Q5VTT5 1437 aa16.37■□□□□ 0.21
GABBR1-203ENST00000377012 NUP155O75694 1391 aa16.37■□□□□ 0.21
GABBR1-203ENST00000377012 NCOA2Q15596 1464 aa16.37■□□□□ 0.21
GABBR1-203ENST00000377012 UACAQ9BZF9 1416 aa16.36■□□□□ 0.21
GABBR1-203ENST00000377012 CCDC184Q52MB2 194 aa16.35■□□□□ 0.21
GABBR1-203ENST00000377012 PRKCSHP14314 528 aaPredicted RBP16.34■□□□□ 0.21
GABBR1-203ENST00000377012 ZBTB47Q9UFB7 747 aaPredicted RBP16.34■□□□□ 0.21
GABBR1-203ENST00000377012 WDR43Q15061 677 aaKnown RBP eCLIP16.34■□□□□ 0.21
GABBR1-203ENST00000377012 TOPBP1Q92547 1522 aa16.33■□□□□ 0.2
GABBR1-203ENST00000377012 JPH4Q96JJ6 628 aa16.31■□□□□ 0.2
GABBR1-203ENST00000377012 FYCO1Q9BQS8 1478 aa16.3■□□□□ 0.2
GABBR1-203ENST00000377012 CC2D2AQ9P2K1 1620 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 128.4 ms