RNA–Protein interactions for RNA: ENST00000376862.3

SYNDIG1-201, Transcript of synapse differentiation inducing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNDIG1, Length 2,522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNDIG1-201ENST00000376862 FANCIQ9NVI1 1328 aa31■■■□□ 2.55
SYNDIG1-201ENST00000376862 TOP2BQ02880 1626 aa30.99■■■□□ 2.55
SYNDIG1-201ENST00000376862 SIN3AQ96ST3 1273 aa30.99■■■□□ 2.55
SYNDIG1-201ENST00000376862 HIRIP3Q9BW71 556 aaPredicted RBP30.97■■■□□ 2.55
SYNDIG1-201ENST00000376862 ANP32CO43423 234 aa30.95■■■□□ 2.54
SYNDIG1-201ENST00000376862 ERICH6Q7L0X2 663 aa30.93■■■□□ 2.54
SYNDIG1-201ENST00000376862 SETD5Q9C0A6 1442 aa30.88■■■□□ 2.53
SYNDIG1-201ENST00000376862 CDK11AQ9UQ88 783 aaPredicted RBP30.85■■■□□ 2.53
SYNDIG1-201ENST00000376862 BIVM-ERCC5R4GMW8 1640 aa30.85■■■□□ 2.53
SYNDIG1-201ENST00000376862 ARHGAP35Q9NRY4 1499 aa30.82■■■□□ 2.53
SYNDIG1-201ENST00000376862 IRX6P78412 446 aaPredicted RBP30.82■■■□□ 2.52
SYNDIG1-201ENST00000376862 CFTRP13569 1480 aa30.76■■■□□ 2.52
SYNDIG1-201ENST00000376862 CUX1P39880 1505 aa30.73■■■□□ 2.51
SYNDIG1-201ENST00000376862 TIMELESSQ9UNS1 1208 aa30.71■■■□□ 2.51
SYNDIG1-201ENST00000376862 TIAM1Q13009 1591 aa30.68■■■□□ 2.5
SYNDIG1-201ENST00000376862 HNRNPUQ00839 825 aaKnown RBP eCLIP30.67■■■□□ 2.5
SYNDIG1-201ENST00000376862 DEKP35659 375 aaKnown RBP30.66■■■□□ 2.5
SYNDIG1-201ENST00000376862 MYT1LQ9UL68 1186 aa30.64■■■□□ 2.49
SYNDIG1-201ENST00000376862 FAM50AQ14320 339 aaKnown RBP30.63■■■□□ 2.49
SYNDIG1-201ENST00000376862 PHLDB1Q86UU1 1377 aa30.62■■■□□ 2.49
SYNDIG1-201ENST00000376862 PRKCSHP14314 528 aaPredicted RBP30.62■■■□□ 2.49
SYNDIG1-201ENST00000376862 CC2D2AQ9P2K1 1620 aa30.61■■■□□ 2.49
SYNDIG1-201ENST00000376862 KIF27Q86VH2 1401 aa30.59■■■□□ 2.49
SYNDIG1-201ENST00000376862 MAP3K1Q13233 1512 aa30.56■■■□□ 2.48
SYNDIG1-201ENST00000376862 LRRC9Q6ZRR7 1453 aa30.56■■■□□ 2.48
SYNDIG1-201ENST00000376862 CADPSQ9ULU8 1353 aa30.51■■■□□ 2.48
SYNDIG1-201ENST00000376862 PPP4R2Q9NY27 417 aa30.51■■■□□ 2.48
SYNDIG1-201ENST00000376862 PRDM2Q13029 1718 aa30.51■■■□□ 2.47
SYNDIG1-201ENST00000376862 ERICH6BQ5W0A0 696 aa30.47■■■□□ 2.47
SYNDIG1-201ENST00000376862 TONSLQ96HA7 1378 aa30.46■■■□□ 2.47
SYNDIG1-201ENST00000376862 B4GALNT3Q6L9W6 998 aa30.39■■■□□ 2.46
SYNDIG1-201ENST00000376862 NBR1Q14596 966 aa30.37■■■□□ 2.45
SYNDIG1-201ENST00000376862 NOP58Q9Y2X3 529 aaKnown RBP30.36■■■□□ 2.45
SYNDIG1-201ENST00000376862 CFAP43Q8NDM7 1665 aa30.35■■■□□ 2.45
SYNDIG1-201ENST00000376862 PAK3O75914 559 aaPredicted RBP30.32■■■□□ 2.44
SYNDIG1-201ENST00000376862 CCDC184Q52MB2 194 aa30.28■■■□□ 2.44
SYNDIG1-201ENST00000376862 FHAD1B1AJZ9 1412 aa30.28■■■□□ 2.44
SYNDIG1-201ENST00000376862 PCF11O94913 1555 aaKnown RBP30.27■■■□□ 2.44
SYNDIG1-201ENST00000376862 FGD5Q6ZNL6 1462 aa30.25■■■□□ 2.43
SYNDIG1-201ENST00000376862 WASHC2AQ641Q2 1341 aa30.24■■■□□ 2.43
SYNDIG1-201ENST00000376862 ATP1B4Q9UN42 357 aaPredicted RBP30.23■■■□□ 2.43
SYNDIG1-201ENST00000376862 FANCD2Q9BXW9 1451 aa30.23■■■□□ 2.43
SYNDIG1-201ENST00000376862 CCDC18Q5T9S5 1454 aa30.22■■■□□ 2.43
SYNDIG1-201ENST00000376862 KDM5BQ9UGL1 1544 aa30.21■■■□□ 2.43
SYNDIG1-201ENST00000376862 IGF1RP08069 1367 aa30.2■■■□□ 2.43
SYNDIG1-201ENST00000376862 ANO8Q9HCE9 1232 aaPredicted RBP30.19■■■□□ 2.42
SYNDIG1-201ENST00000376862 P3H3Q8IVL6 736 aa30.18■■■□□ 2.42
SYNDIG1-201ENST00000376862 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP30.17■■■□□ 2.42
SYNDIG1-201ENST00000376862 NESP48681 1621 aa30.17■■■□□ 2.42
SYNDIG1-201ENST00000376862 HSPA5P11021 654 aaKnown RBP30.16■■■□□ 2.42
SYNDIG1-201ENST00000376862 UACAQ9BZF9 1416 aa30.15■■■□□ 2.42
SYNDIG1-201ENST00000376862 FAM9BQ8IZU0 186 aa30.15■■■□□ 2.42
SYNDIG1-201ENST00000376862 ZBED9Q6R2W3 1325 aa30.1■■■□□ 2.41
SYNDIG1-201ENST00000376862 CNTLNQ9NXG0 1405 aa30.09■■■□□ 2.41
SYNDIG1-201ENST00000376862 CARMIL1Q5VZK9 1371 aa30.09■■■□□ 2.41
SYNDIG1-201ENST00000376862 NCOA2Q15596 1464 aa30.09■■■□□ 2.41
SYNDIG1-201ENST00000376862 PTPN23Q9H3S7 1636 aa30.08■■■□□ 2.41
SYNDIG1-201ENST00000376862 PTPRKQ15262 1439 aa30.06■■■□□ 2.4
SYNDIG1-201ENST00000376862 HFM1A2PYH4 1435 aa30.06■■■□□ 2.4
SYNDIG1-201ENST00000376862 FGD6Q6ZV73 1430 aa30.05■■■□□ 2.4
SYNDIG1-201ENST00000376862 MRS2Q9HD23 443 aa30.04■■■□□ 2.4
SYNDIG1-201ENST00000376862 AQRO60306 1485 aaKnown RBP eCLIP30.04■■■□□ 2.4
SYNDIG1-201ENST00000376862 PRKRIP1Q9H875 184 aaPredicted RBP30.03■■■□□ 2.4
SYNDIG1-201ENST00000376862 IPO9Q96P70 1041 aaKnown RBP30.03■■■□□ 2.4
SYNDIG1-201ENST00000376862 FHOD3Q2V2M9 1422 aa30.01■■■□□ 2.4
SYNDIG1-201ENST00000376862 RTL5Q5HYW3 569 aaPredicted RBP30.01■■■□□ 2.39
SYNDIG1-201ENST00000376862 RAD54L2Q9Y4B4 1467 aa30.01■■■□□ 2.39
SYNDIG1-201ENST00000376862 DNMBPQ6XZF7 1577 aa30.01■■■□□ 2.39
SYNDIG1-201ENST00000376862 ANP32AP39687 249 aaKnown RBP30■■■□□ 2.39
SYNDIG1-201ENST00000376862 SALL2Q9Y467 1007 aaPredicted RBP30■■■□□ 2.39
SYNDIG1-201ENST00000376862 FYCO1Q9BQS8 1478 aa30■■■□□ 2.39
SYNDIG1-201ENST00000376862 TOPBP1Q92547 1522 aa29.98■■■□□ 2.39
SYNDIG1-201ENST00000376862 EIF4G2P78344 907 aaKnown RBP eCLIP29.98■■■□□ 2.39
SYNDIG1-201ENST00000376862 NAIPQ13075 1403 aa29.96■■■□□ 2.39
SYNDIG1-201ENST00000376862 DNAJC5BQ9UF47 199 aa29.96■■■□□ 2.39
SYNDIG1-201ENST00000376862 C11orf95C9JLR9 678 aaPredicted RBP29.95■■■□□ 2.39
SYNDIG1-201ENST00000376862 ZBTB47Q9UFB7 747 aaPredicted RBP29.95■■■□□ 2.38
SYNDIG1-201ENST00000376862 POLA1P09884 1462 aaPredicted RBP29.95■■■□□ 2.38
SYNDIG1-201ENST00000376862 AKNAQ7Z591 1439 aa29.94■■■□□ 2.38
SYNDIG1-201ENST00000376862 CASKIN1Q8WXD9 1431 aa29.93■■■□□ 2.38
SYNDIG1-201ENST00000376862 IL27Q8NEV9 243 aa29.92■■■□□ 2.38
SYNDIG1-201ENST00000376862 CCDC7Q96M83 1385 aa29.9■■■□□ 2.38
SYNDIG1-201ENST00000376862 CCDC136Q96JN2 1154 aa29.89■■■□□ 2.38
SYNDIG1-201ENST00000376862 LAMC3Q9Y6N6 1575 aa29.87■■■□□ 2.37
SYNDIG1-201ENST00000376862 ABCA10Q8WWZ4 1543 aa29.87■■■□□ 2.37
SYNDIG1-201ENST00000376862 NCOA1Q15788 1441 aa29.87■■■□□ 2.37
SYNDIG1-201ENST00000376862 FMN1Q68DA7 1419 aa29.85■■■□□ 2.37
SYNDIG1-201ENST00000376862 SMG6Q86US8 1419 aaKnown RBP29.85■■■□□ 2.37
SYNDIG1-201ENST00000376862 RTN4Q9NQC3 1192 aaKnown RBP29.82■■■□□ 2.36
SYNDIG1-201ENST00000376862 URB2Q14146 1524 aaKnown RBP29.81■■■□□ 2.36
SYNDIG1-201ENST00000376862 DENND4BO75064 1496 aaPredicted RBP29.79■■■□□ 2.36
SYNDIG1-201ENST00000376862 MTUS2Q5JR59 1369 aa29.79■■■□□ 2.36
SYNDIG1-201ENST00000376862 EFCAB5A4FU69 1503 aa29.78■■■□□ 2.36
SYNDIG1-201ENST00000376862 RNF123Q5XPI4 1314 aa29.78■■■□□ 2.36
SYNDIG1-201ENST00000376862 NUDCQ9Y266 331 aa29.77■■■□□ 2.36
SYNDIG1-201ENST00000376862 L3MBTL2Q969R5 705 aa29.74■■■□□ 2.35
SYNDIG1-201ENST00000376862 RRP7BPQ9NSQ0 103 aa29.73■■■□□ 2.35
SYNDIG1-201ENST00000376862 HECW1Q76N89 1606 aa29.72■■■□□ 2.35
SYNDIG1-201ENST00000376862 MYOM3Q5VTT5 1437 aa29.71■■■□□ 2.35
SYNDIG1-201ENST00000376862 PDS5BQ9NTI5 1447 aa29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms