RNA–Protein interactions for RNA: ENST00000376618.6

CPT1A-202, Transcript of carnitine palmitoyltransferase 1A, humanhuman

TSL 1 (best) BASIC

Gene CPT1A, Length 2,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1A-202ENST00000376618 URB2Q14146 1524 aaKnown RBP20.71■□□□□ 0.91
CPT1A-202ENST00000376618 ACIN1Q9UKV3 1341 aaKnown RBP20.7■□□□□ 0.9
CPT1A-202ENST00000376618 PHLDB1Q86UU1 1377 aa20.69■□□□□ 0.9
CPT1A-202ENST00000376618 RRBP1Q9P2E9 1410 aaKnown RBP20.68■□□□□ 0.9
CPT1A-202ENST00000376618 DNMBPQ6XZF7 1577 aa20.68■□□□□ 0.9
CPT1A-202ENST00000376618 ARID3CA6NKF2 412 aa20.67■□□□□ 0.9
CPT1A-202ENST00000376618 ABCA10Q8WWZ4 1543 aa20.64■□□□□ 0.89
CPT1A-202ENST00000376618 GTF3C3Q9Y5Q9 886 aa20.61■□□□□ 0.89
CPT1A-202ENST00000376618 TIAM1Q13009 1591 aa20.61■□□□□ 0.89
CPT1A-202ENST00000376618 RAB3GAP2Q9H2M9 1393 aa20.6■□□□□ 0.89
CPT1A-202ENST00000376618 SIN3AQ96ST3 1273 aa20.59■□□□□ 0.89
CPT1A-202ENST00000376618 LRRC9Q6ZRR7 1453 aa20.59■□□□□ 0.89
CPT1A-202ENST00000376618 PCF11O94913 1555 aaKnown RBP20.59■□□□□ 0.89
CPT1A-202ENST00000376618 KIF21AQ7Z4S6 1674 aa20.52■□□□□ 0.88
CPT1A-202ENST00000376618 AQRO60306 1485 aaKnown RBP eCLIP20.51■□□□□ 0.87
CPT1A-202ENST00000376618 GAPVD1Q14C86 1478 aa20.51■□□□□ 0.87
CPT1A-202ENST00000376618 HIRIP3Q9BW71 556 aaPredicted RBP20.5■□□□□ 0.87
CPT1A-202ENST00000376618 FHAD1B1AJZ9 1412 aa20.49■□□□□ 0.87
CPT1A-202ENST00000376618 PDS5BQ9NTI5 1447 aa20.49■□□□□ 0.87
CPT1A-202ENST00000376618 LAMC3Q9Y6N6 1575 aa20.49■□□□□ 0.87
CPT1A-202ENST00000376618 CENPBP07199 599 aaPredicted RBP20.49■□□□□ 0.87
CPT1A-202ENST00000376618 SETD5Q9C0A6 1442 aa20.42■□□□□ 0.86
CPT1A-202ENST00000376618 MTUS2Q5JR59 1369 aa20.4■□□□□ 0.86
CPT1A-202ENST00000376618 MAPKBP1O60336 1514 aa20.4■□□□□ 0.86
CPT1A-202ENST00000376618 CASKIN1Q8WXD9 1431 aa20.39■□□□□ 0.85
CPT1A-202ENST00000376618 CHIC2Q9UKJ5 165 aa20.39■□□□□ 0.85
CPT1A-202ENST00000376618 CLSPNQ9HAW4 1339 aa20.39■□□□□ 0.85
CPT1A-202ENST00000376618 WDR97A6NE52 1622 aa20.38■□□□□ 0.85
CPT1A-202ENST00000376618 CTTNBP2Q8WZ74 1663 aa20.38■□□□□ 0.85
CPT1A-202ENST00000376618 CUL7Q14999 1698 aa20.37■□□□□ 0.85
CPT1A-202ENST00000376618 KCNH8Q96L42 1107 aa20.37■□□□□ 0.85
CPT1A-202ENST00000376618 ABCA5Q8WWZ7 1642 aa20.37■□□□□ 0.85
CPT1A-202ENST00000376618 MAP3K1Q13233 1512 aa20.35■□□□□ 0.85
CPT1A-202ENST00000376618 FYCO1Q9BQS8 1478 aa20.35■□□□□ 0.85
CPT1A-202ENST00000376618 PTPRKQ15262 1439 aa20.34■□□□□ 0.85
CPT1A-202ENST00000376618 SNAPC4Q5SXM2 1469 aa20.34■□□□□ 0.85
CPT1A-202ENST00000376618 ZNF608Q9ULD9 1512 aaPredicted RBP20.34■□□□□ 0.85
CPT1A-202ENST00000376618 CFAP43Q8NDM7 1665 aa20.33■□□□□ 0.85
CPT1A-202ENST00000376618 FMN1Q68DA7 1419 aa20.32■□□□□ 0.84
CPT1A-202ENST00000376618 LRRIQ1Q96JM4 1722 aa20.32■□□□□ 0.84
CPT1A-202ENST00000376618 RRP7BPQ9NSQ0 103 aa20.31■□□□□ 0.84
CPT1A-202ENST00000376618 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
CPT1A-202ENST00000376618 EFCAB5A4FU69 1503 aa20.3■□□□□ 0.84
CPT1A-202ENST00000376618 FBLN2P98095 1184 aa20.29■□□□□ 0.84
CPT1A-202ENST00000376618 FGD6Q6ZV73 1430 aa20.28■□□□□ 0.84
CPT1A-202ENST00000376618 DDX10Q13206 875 aaKnown RBP20.25■□□□□ 0.83
CPT1A-202ENST00000376618 MAGI3Q5TCQ9 1506 aa20.24■□□□□ 0.83
CPT1A-202ENST00000376618 NCOA2Q15596 1464 aa20.23■□□□□ 0.83
CPT1A-202ENST00000376618 SAMD9Q5K651 1589 aa20.21■□□□□ 0.83
CPT1A-202ENST00000376618 GRIN2BQ13224 1484 aa20.21■□□□□ 0.83
CPT1A-202ENST00000376618 CDK13Q14004 1512 aaKnown RBP20.2■□□□□ 0.82
CPT1A-202ENST00000376618 FOXD1Q16676 465 aa20.19■□□□□ 0.82
CPT1A-202ENST00000376618 MRC2Q9UBG0 1479 aa20.17■□□□□ 0.82
CPT1A-202ENST00000376618 ZNF644Q9H582 1327 aaPredicted RBP20.16■□□□□ 0.82
CPT1A-202ENST00000376618 PBRM1Q86U86 1689 aa20.16■□□□□ 0.82
CPT1A-202ENST00000376618 TRIM52Q96A61 297 aa20.15■□□□□ 0.82
CPT1A-202ENST00000376618 MYOM3Q5VTT5 1437 aa20.14■□□□□ 0.81
CPT1A-202ENST00000376618 PPP1R15AO75807 674 aaPredicted RBP20.13■□□□□ 0.81
CPT1A-202ENST00000376618 CCDC18Q5T9S5 1454 aa20.13■□□□□ 0.81
CPT1A-202ENST00000376618 IQGAP2Q13576 1575 aa20.1■□□□□ 0.81
CPT1A-202ENST00000376618 NAIPQ13075 1403 aa20.09■□□□□ 0.81
CPT1A-202ENST00000376618 ERCC6Q03468 1493 aa20.09■□□□□ 0.81
CPT1A-202ENST00000376618 ADAMTS12P58397 1594 aa20.08■□□□□ 0.81
CPT1A-202ENST00000376618 CHMP7Q8WUX9 453 aaPredicted RBP20.08■□□□□ 0.8
CPT1A-202ENST00000376618 EPRSP07814 1512 aaKnown RBP20.07■□□□□ 0.8
CPT1A-202ENST00000376618 THOC2Q8NI27 1593 aaKnown RBP20.05■□□□□ 0.8
CPT1A-202ENST00000376618 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
CPT1A-202ENST00000376618 HFM1A2PYH4 1435 aa20.04■□□□□ 0.8
CPT1A-202ENST00000376618 SUPT6HQ7KZ85 1726 aaKnown RBP20.04■□□□□ 0.8
CPT1A-202ENST00000376618 ZNF777Q9ULD5 760 aaPredicted RBP20.04■□□□□ 0.8
CPT1A-202ENST00000376618 PTPN23Q9H3S7 1636 aa20.03■□□□□ 0.8
CPT1A-202ENST00000376618 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.03■□□□□ 0.8
CPT1A-202ENST00000376618 KDM6BO15054 1643 aa20.02■□□□□ 0.8
CPT1A-202ENST00000376618 UGGT2Q9NYU1 1516 aa20.02■□□□□ 0.79
CPT1A-202ENST00000376618 EHBP1L1Q8N3D4 1523 aa20■□□□□ 0.79
CPT1A-202ENST00000376618 IFT140Q96RY7 1462 aa19.99■□□□□ 0.79
CPT1A-202ENST00000376618 PHF23Q9BUL5 403 aaPredicted RBP19.99■□□□□ 0.79
CPT1A-202ENST00000376618 DISP1Q96F81 1524 aa19.98■□□□□ 0.79
CPT1A-202ENST00000376618 UACAQ9BZF9 1416 aa19.98■□□□□ 0.79
CPT1A-202ENST00000376618 EIF4G3O43432 1585 aaKnown RBP19.96■□□□□ 0.79
CPT1A-202ENST00000376618 PRG4Q92954 1404 aaPredicted RBP19.95■□□□□ 0.78
CPT1A-202ENST00000376618 PLB1Q6P1J6 1458 aa19.94■□□□□ 0.78
CPT1A-202ENST00000376618 WDR62O43379 1518 aa19.94■□□□□ 0.78
CPT1A-202ENST00000376618 HECW1Q76N89 1606 aa19.94■□□□□ 0.78
CPT1A-202ENST00000376618 GRIN2AQ12879 1464 aa19.94■□□□□ 0.78
CPT1A-202ENST00000376618 MPHOSPH9Q99550 1183 aa19.94■□□□□ 0.78
CPT1A-202ENST00000376618 ARHGEF11O15085 1522 aa19.93■□□□□ 0.78
CPT1A-202ENST00000376618 DENND4BO75064 1496 aaPredicted RBP19.93■□□□□ 0.78
CPT1A-202ENST00000376618 NUP153P49790 1475 aaKnown RBP19.92■□□□□ 0.78
CPT1A-202ENST00000376618 KIAA0586Q9BVV6 1533 aa19.91■□□□□ 0.78
CPT1A-202ENST00000376618 JPH4Q96JJ6 628 aa19.91■□□□□ 0.78
CPT1A-202ENST00000376618 KIAA0556O60303 1618 aa19.88■□□□□ 0.77
CPT1A-202ENST00000376618 L3MBTL2Q969R5 705 aa19.88■□□□□ 0.77
CPT1A-202ENST00000376618 CNGB1Q14028 1251 aaPredicted RBP19.87■□□□□ 0.77
CPT1A-202ENST00000376618 CFDP1Q9UEE9 299 aaPredicted RBP19.86■□□□□ 0.77
CPT1A-202ENST00000376618 TIMELESSQ9UNS1 1208 aa19.86■□□□□ 0.77
CPT1A-202ENST00000376618 BCANQ96GW7 911 aa19.85■□□□□ 0.77
CPT1A-202ENST00000376618 CEP170Q5SW79 1584 aa19.85■□□□□ 0.77
CPT1A-202ENST00000376618 SUPT16HQ9Y5B9 1047 aaKnown RBP19.84■□□□□ 0.77
CPT1A-202ENST00000376618 HSPA5P11021 654 aaKnown RBP19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms