RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-225ENST00000376568 SYNJ1O43426 1573 aa19.75■□□□□ 0.75
DDR1-225ENST00000376568 HMGXB3Q12766 1538 aa19.73■□□□□ 0.75
DDR1-225ENST00000376568 HRCP23327 699 aa19.73■□□□□ 0.75
DDR1-225ENST00000376568 YTHDC1Q96MU7 727 aaKnown RBP19.73■□□□□ 0.75
DDR1-225ENST00000376568 CHGAP10645 457 aaKnown RBP19.71■□□□□ 0.75
DDR1-225ENST00000376568 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
DDR1-225ENST00000376568 OSCARQ8IYS5 282 aa19.7■□□□□ 0.74
DDR1-225ENST00000376568 CFDP1Q9UEE9 299 aaPredicted RBP19.69■□□□□ 0.74
DDR1-225ENST00000376568 CUX1P39880 1505 aa19.69■□□□□ 0.74
DDR1-225ENST00000376568 TOPBP1Q92547 1522 aa19.66■□□□□ 0.74
DDR1-225ENST00000376568 POLA1P09884 1462 aaPredicted RBP19.66■□□□□ 0.74
DDR1-225ENST00000376568 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
DDR1-225ENST00000376568 TSPY4P0CV99 314 aa19.63■□□□□ 0.73
DDR1-225ENST00000376568 TSPY10P0CW01 314 aa19.63■□□□□ 0.73
DDR1-225ENST00000376568 ZEB1P37275 1124 aaPredicted RBP19.63■□□□□ 0.73
DDR1-225ENST00000376568 MLECQ14165 292 aa19.61■□□□□ 0.73
DDR1-225ENST00000376568 BCANQ96GW7 911 aa19.61■□□□□ 0.73
DDR1-225ENST00000376568 HIRIP3Q9BW71 556 aaPredicted RBP19.59■□□□□ 0.73
DDR1-225ENST00000376568 ZNF608Q9ULD9 1512 aaPredicted RBP19.58■□□□□ 0.73
DDR1-225ENST00000376568 MRC2Q9UBG0 1479 aa19.57■□□□□ 0.72
DDR1-225ENST00000376568 ARID4BQ4LE39 1312 aaPredicted RBP19.54■□□□□ 0.72
DDR1-225ENST00000376568 URB2Q14146 1524 aaKnown RBP19.53■□□□□ 0.72
DDR1-225ENST00000376568 KDM2AQ9Y2K7 1162 aa19.52■□□□□ 0.72
DDR1-225ENST00000376568 ESF1Q9H501 851 aaKnown RBP19.52■□□□□ 0.72
DDR1-225ENST00000376568 RGL3Q3MIN7 710 aa19.48■□□□□ 0.71
DDR1-225ENST00000376568 FOXD1Q16676 465 aa19.47■□□□□ 0.71
DDR1-225ENST00000376568 HNRNPMP52272 730 aaKnown RBP eCLIP19.45■□□□□ 0.7
DDR1-225ENST00000376568 CARMIL2Q6F5E8 1435 aa19.45■□□□□ 0.7
DDR1-225ENST00000376568 PEG3Q9GZU2 1588 aa19.45■□□□□ 0.7
DDR1-225ENST00000376568 STAG3Q9UJ98 1225 aa19.43■□□□□ 0.7
DDR1-225ENST00000376568 PTPRGP23470 1445 aa19.43■□□□□ 0.7
DDR1-225ENST00000376568 SNAPC4Q5SXM2 1469 aa19.42■□□□□ 0.7
DDR1-225ENST00000376568 VPS8Q8N3P4 1428 aa19.42■□□□□ 0.7
DDR1-225ENST00000376568 SIN3AQ96ST3 1273 aa19.41■□□□□ 0.7
DDR1-225ENST00000376568 CCNB3Q8WWL7 1395 aa19.39■□□□□ 0.69
DDR1-225ENST00000376568 ZNF644Q9H582 1327 aaPredicted RBP19.39■□□□□ 0.69
DDR1-225ENST00000376568 GGT6Q6P531 493 aa19.38■□□□□ 0.69
DDR1-225ENST00000376568 GRIN2BQ13224 1484 aa19.38■□□□□ 0.69
DDR1-225ENST00000376568 LAMC3Q9Y6N6 1575 aa19.37■□□□□ 0.69
DDR1-225ENST00000376568 PLEKHG5O94827 1062 aa19.36■□□□□ 0.69
DDR1-225ENST00000376568 FHAD1B1AJZ9 1412 aa19.35■□□□□ 0.69
DDR1-225ENST00000376568 TOP2BQ02880 1626 aa19.33■□□□□ 0.69
DDR1-225ENST00000376568 IFT140Q96RY7 1462 aa19.31■□□□□ 0.68
DDR1-225ENST00000376568 DNMBPQ6XZF7 1577 aa19.31■□□□□ 0.68
DDR1-225ENST00000376568 PRG4Q92954 1404 aaPredicted RBP19.3■□□□□ 0.68
DDR1-225ENST00000376568 FAM69CQ0P6D2 419 aa19.29■□□□□ 0.68
DDR1-225ENST00000376568 FMN1Q68DA7 1419 aa19.25■□□□□ 0.67
DDR1-225ENST00000376568 ARAP1Q96P48 1450 aa19.24■□□□□ 0.67
DDR1-225ENST00000376568 PRXQ9BXM0 1461 aa19.2■□□□□ 0.66
DDR1-225ENST00000376568 DIEXFQ68CQ4 756 aaKnown RBP19.2■□□□□ 0.66
DDR1-225ENST00000376568 EFCAB2Q5VUJ9 269 aa19.19■□□□□ 0.66
DDR1-225ENST00000376568 TONSLQ96HA7 1378 aa19.19■□□□□ 0.66
DDR1-225ENST00000376568 SENP3-EIF4A1A0A087X0R7 540 aa19.19■□□□□ 0.66
DDR1-225ENST00000376568 NUTM2DQ5VT03 806 aaPredicted RBP19.18■□□□□ 0.66
DDR1-225ENST00000376568 ABCA10Q8WWZ4 1543 aa19.17■□□□□ 0.66
DDR1-225ENST00000376568 KIF3BO15066 747 aa19.16■□□□□ 0.66
DDR1-225ENST00000376568 AFAP1Q8N556 730 aa19.16■□□□□ 0.66
DDR1-225ENST00000376568 ARHGAP35Q9NRY4 1499 aa19.16■□□□□ 0.66
DDR1-225ENST00000376568 KIF21AQ7Z4S6 1674 aa19.15■□□□□ 0.66
DDR1-225ENST00000376568 DDX10Q13206 875 aaKnown RBP19.11■□□□□ 0.65
DDR1-225ENST00000376568 PRDM2Q13029 1718 aa19.11■□□□□ 0.65
DDR1-225ENST00000376568 KIF21BO75037 1637 aa19.1■□□□□ 0.65
DDR1-225ENST00000376568 RAPGEF3O95398 923 aa19.07■□□□□ 0.64
DDR1-225ENST00000376568 PKD2Q13563 968 aa19.07■□□□□ 0.64
DDR1-225ENST00000376568 PHLDB1Q86UU1 1377 aa19.06■□□□□ 0.64
DDR1-225ENST00000376568 PLB1Q6P1J6 1458 aa19.06■□□□□ 0.64
DDR1-225ENST00000376568 PPP1R15AO75807 674 aaPredicted RBP19.05■□□□□ 0.64
DDR1-225ENST00000376568 SPAG9O60271 1321 aaKnown RBP19.04■□□□□ 0.64
DDR1-225ENST00000376568 SAFB2Q14151 953 aaKnown RBP eCLIP19.04■□□□□ 0.64
DDR1-225ENST00000376568 ZNF316A6NFI3 1004 aaPredicted RBP19.02■□□□□ 0.64
DDR1-225ENST00000376568 GRIN2AQ12879 1464 aa19.01■□□□□ 0.63
DDR1-225ENST00000376568 RAB3GAP2Q9H2M9 1393 aa19■□□□□ 0.63
DDR1-225ENST00000376568 DCAF11Q8TEB1 546 aa18.99■□□□□ 0.63
DDR1-225ENST00000376568 SYNJ2O15056 1496 aa18.99■□□□□ 0.63
DDR1-225ENST00000376568 NUP155O75694 1391 aa18.98■□□□□ 0.63
DDR1-225ENST00000376568 CDK13Q14004 1512 aaKnown RBP18.97■□□□□ 0.63
DDR1-225ENST00000376568 MPHOSPH9Q99550 1183 aa18.94■□□□□ 0.62
DDR1-225ENST00000376568 KIAA0586Q9BVV6 1533 aa18.93■□□□□ 0.62
DDR1-225ENST00000376568 SALL2Q9Y467 1007 aaPredicted RBP18.93■□□□□ 0.62
DDR1-225ENST00000376568 CCDC18Q5T9S5 1454 aa18.93■□□□□ 0.62
DDR1-225ENST00000376568 STK26Q9P289 416 aa18.92■□□□□ 0.62
DDR1-225ENST00000376568 C14orf37Q86TY3 774 aa18.91■□□□□ 0.62
DDR1-225ENST00000376568 WASHC2CQ9Y4E1 1318 aa18.91■□□□□ 0.62
DDR1-225ENST00000376568 SCAF1Q9H7N4 1312 aaKnown RBP18.9■□□□□ 0.62
DDR1-225ENST00000376568 SETD5Q9C0A6 1442 aa18.87■□□□□ 0.61
DDR1-225ENST00000376568 ERICH3Q5RHP9 1530 aa18.86■□□□□ 0.61
DDR1-225ENST00000376568 TMC1Q8TDI8 760 aa18.86■□□□□ 0.61
DDR1-225ENST00000376568 BIVM-ERCC5R4GMW8 1640 aa18.86■□□□□ 0.61
DDR1-225ENST00000376568 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
DDR1-225ENST00000376568 NUTM2FA1L443 756 aa18.83■□□□□ 0.61
DDR1-225ENST00000376568 CENPBP07199 599 aaPredicted RBP18.83■□□□□ 0.61
DDR1-225ENST00000376568 LRRC9Q6ZRR7 1453 aa18.83■□□□□ 0.6
DDR1-225ENST00000376568 SLC24A1O60721 1099 aa18.83■□□□□ 0.6
DDR1-225ENST00000376568 CARD11Q9BXL7 1154 aa18.83■□□□□ 0.6
DDR1-225ENST00000376568 CASKIN1Q8WXD9 1431 aa18.83■□□□□ 0.6
DDR1-225ENST00000376568 IQGAP2Q13576 1575 aa18.82■□□□□ 0.6
DDR1-225ENST00000376568 ZBTB7CA1YPR0 619 aa18.82■□□□□ 0.6
DDR1-225ENST00000376568 ANKRD30AQ9BXX3 1397 aa18.82■□□□□ 0.6
DDR1-225ENST00000376568 NCOA2Q15596 1464 aa18.81■□□□□ 0.6
DDR1-225ENST00000376568 ANP32CO43423 234 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms