RNA–Protein interactions for RNA: ENST00000375022.8

TRO-203, Transcript of trophinin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRO, Length 2,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-203ENST00000375022 RAB3GAP2Q9H2M9 1393 aa19.02■□□□□ 0.64
TRO-203ENST00000375022 NESP48681 1621 aa19.01■□□□□ 0.63
TRO-203ENST00000375022 LRRC9Q6ZRR7 1453 aa19■□□□□ 0.63
TRO-203ENST00000375022 PHLDB1Q86UU1 1377 aa18.99■□□□□ 0.63
TRO-203ENST00000375022 MYT1Q01538 1121 aa18.98■□□□□ 0.63
TRO-203ENST00000375022 FHAD1B1AJZ9 1412 aa18.97■□□□□ 0.63
TRO-203ENST00000375022 FHOD3Q2V2M9 1422 aa18.96■□□□□ 0.63
TRO-203ENST00000375022 POLA1P09884 1462 aaPredicted RBP18.96■□□□□ 0.63
TRO-203ENST00000375022 MAP3K1Q13233 1512 aa18.95■□□□□ 0.62
TRO-203ENST00000375022 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
TRO-203ENST00000375022 DNMBPQ6XZF7 1577 aa18.94■□□□□ 0.62
TRO-203ENST00000375022 ABCA10Q8WWZ4 1543 aa18.92■□□□□ 0.62
TRO-203ENST00000375022 SETD5Q9C0A6 1442 aa18.92■□□□□ 0.62
TRO-203ENST00000375022 PCF11O94913 1555 aaKnown RBP18.91■□□□□ 0.62
TRO-203ENST00000375022 SIN3AQ96ST3 1273 aa18.88■□□□□ 0.61
TRO-203ENST00000375022 MAPKBP1O60336 1514 aa18.87■□□□□ 0.61
TRO-203ENST00000375022 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
TRO-203ENST00000375022 CFAP43Q8NDM7 1665 aa18.81■□□□□ 0.6
TRO-203ENST00000375022 CASKIN1Q8WXD9 1431 aa18.81■□□□□ 0.6
TRO-203ENST00000375022 FYCO1Q9BQS8 1478 aa18.81■□□□□ 0.6
TRO-203ENST00000375022 DNAJC5BQ9UF47 199 aa18.8■□□□□ 0.6
TRO-203ENST00000375022 URB2Q14146 1524 aaKnown RBP18.8■□□□□ 0.6
TRO-203ENST00000375022 EFCAB5A4FU69 1503 aa18.79■□□□□ 0.6
TRO-203ENST00000375022 CUL7Q14999 1698 aa18.78■□□□□ 0.6
TRO-203ENST00000375022 FMN1Q68DA7 1419 aa18.76■□□□□ 0.59
TRO-203ENST00000375022 MTUS2Q5JR59 1369 aa18.74■□□□□ 0.59
TRO-203ENST00000375022 AQRO60306 1485 aaKnown RBP eCLIP18.74■□□□□ 0.59
TRO-203ENST00000375022 CTTNBP2Q8WZ74 1663 aa18.73■□□□□ 0.59
TRO-203ENST00000375022 KCNH8Q96L42 1107 aa18.72■□□□□ 0.59
TRO-203ENST00000375022 LAMC3Q9Y6N6 1575 aa18.72■□□□□ 0.59
TRO-203ENST00000375022 GAPVD1Q14C86 1478 aa18.72■□□□□ 0.59
TRO-203ENST00000375022 WDR97A6NE52 1622 aa18.72■□□□□ 0.59
TRO-203ENST00000375022 HIRIP3Q9BW71 556 aaPredicted RBP18.72■□□□□ 0.59
TRO-203ENST00000375022 DDX10Q13206 875 aaKnown RBP18.71■□□□□ 0.59
TRO-203ENST00000375022 FGD6Q6ZV73 1430 aa18.7■□□□□ 0.58
TRO-203ENST00000375022 SNAPC4Q5SXM2 1469 aa18.69■□□□□ 0.58
TRO-203ENST00000375022 PDS5BQ9NTI5 1447 aa18.69■□□□□ 0.58
TRO-203ENST00000375022 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.67■□□□□ 0.58
TRO-203ENST00000375022 PPP1R15AO75807 674 aaPredicted RBP18.65■□□□□ 0.58
TRO-203ENST00000375022 ABCA5Q8WWZ7 1642 aa18.64■□□□□ 0.58
TRO-203ENST00000375022 PTPRKQ15262 1439 aa18.64■□□□□ 0.57
TRO-203ENST00000375022 TIMELESSQ9UNS1 1208 aa18.63■□□□□ 0.57
TRO-203ENST00000375022 NCOA2Q15596 1464 aa18.61■□□□□ 0.57
TRO-203ENST00000375022 SUPT16HQ9Y5B9 1047 aaKnown RBP18.6■□□□□ 0.57
TRO-203ENST00000375022 SAMD9Q5K651 1589 aa18.6■□□□□ 0.57
TRO-203ENST00000375022 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
TRO-203ENST00000375022 ARID3CA6NKF2 412 aa18.6■□□□□ 0.57
TRO-203ENST00000375022 GRIN2BQ13224 1484 aa18.59■□□□□ 0.57
TRO-203ENST00000375022 TONSLQ96HA7 1378 aa18.58■□□□□ 0.57
TRO-203ENST00000375022 MYOM3Q5VTT5 1437 aa18.57■□□□□ 0.56
TRO-203ENST00000375022 CHIC2Q9UKJ5 165 aa18.57■□□□□ 0.56
TRO-203ENST00000375022 HFM1A2PYH4 1435 aa18.56■□□□□ 0.56
TRO-203ENST00000375022 KIF21AQ7Z4S6 1674 aa18.56■□□□□ 0.56
TRO-203ENST00000375022 LRRIQ1Q96JM4 1722 aa18.56■□□□□ 0.56
TRO-203ENST00000375022 RRP7BPQ9NSQ0 103 aa18.55■□□□□ 0.56
TRO-203ENST00000375022 UACAQ9BZF9 1416 aa18.53■□□□□ 0.56
TRO-203ENST00000375022 NAIPQ13075 1403 aa18.53■□□□□ 0.56
TRO-203ENST00000375022 PTPN23Q9H3S7 1636 aa18.51■□□□□ 0.55
TRO-203ENST00000375022 TARBP1Q13395 1621 aaKnown RBP18.51■□□□□ 0.55
TRO-203ENST00000375022 MAGI3Q5TCQ9 1506 aa18.5■□□□□ 0.55
TRO-203ENST00000375022 EHBP1L1Q8N3D4 1523 aa18.5■□□□□ 0.55
TRO-203ENST00000375022 SUPT6HQ7KZ85 1726 aaKnown RBP18.5■□□□□ 0.55
TRO-203ENST00000375022 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
TRO-203ENST00000375022 ANP32CO43423 234 aa18.47■□□□□ 0.55
TRO-203ENST00000375022 THOC2Q8NI27 1593 aaKnown RBP18.46■□□□□ 0.55
TRO-203ENST00000375022 UGGT2Q9NYU1 1516 aa18.46■□□□□ 0.55
TRO-203ENST00000375022 CDK13Q14004 1512 aaKnown RBP18.42■□□□□ 0.54
TRO-203ENST00000375022 IQGAP2Q13576 1575 aa18.41■□□□□ 0.54
TRO-203ENST00000375022 EPRSP07814 1512 aaKnown RBP18.41■□□□□ 0.54
TRO-203ENST00000375022 ARHGEF11O15085 1522 aa18.4■□□□□ 0.54
TRO-203ENST00000375022 PBRM1Q86U86 1689 aa18.4■□□□□ 0.54
TRO-203ENST00000375022 BCANQ96GW7 911 aa18.39■□□□□ 0.53
TRO-203ENST00000375022 HECW1Q76N89 1606 aa18.39■□□□□ 0.53
TRO-203ENST00000375022 CCER2I3L3R5 266 aa18.38■□□□□ 0.53
TRO-203ENST00000375022 FOXD1Q16676 465 aa18.38■□□□□ 0.53
TRO-203ENST00000375022 MRC2Q9UBG0 1479 aa18.37■□□□□ 0.53
TRO-203ENST00000375022 ADAMTS12P58397 1594 aa18.37■□□□□ 0.53
TRO-203ENST00000375022 ZNF608Q9ULD9 1512 aaPredicted RBP18.36■□□□□ 0.53
TRO-203ENST00000375022 MPHOSPH9Q99550 1183 aa18.35■□□□□ 0.53
TRO-203ENST00000375022 TCOF1Q13428 1488 aaKnown RBP18.35■□□□□ 0.53
TRO-203ENST00000375022 FKBP8Q14318 412 aa18.35■□□□□ 0.53
TRO-203ENST00000375022 KDM6BO15054 1643 aa18.32■□□□□ 0.52
TRO-203ENST00000375022 WDR62O43379 1518 aa18.31■□□□□ 0.52
TRO-203ENST00000375022 DENND4BO75064 1496 aaPredicted RBP18.31■□□□□ 0.52
TRO-203ENST00000375022 ZNF644Q9H582 1327 aaPredicted RBP18.31■□□□□ 0.52
TRO-203ENST00000375022 HSPA5P11021 654 aaKnown RBP18.31■□□□□ 0.52
TRO-203ENST00000375022 KDM5BQ9UGL1 1544 aa18.31■□□□□ 0.52
TRO-203ENST00000375022 MIA2Q96PC5 1412 aa18.31■□□□□ 0.52
TRO-203ENST00000375022 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
TRO-203ENST00000375022 IFT140Q96RY7 1462 aa18.27■□□□□ 0.52
TRO-203ENST00000375022 WASHC2AQ641Q2 1341 aa18.26■□□□□ 0.51
TRO-203ENST00000375022 TSHZ2Q9NRE2 1034 aa18.26■□□□□ 0.51
TRO-203ENST00000375022 GCC2Q8IWJ2 1684 aa18.25■□□□□ 0.51
TRO-203ENST00000375022 EIF4G2P78344 907 aaKnown RBP eCLIP18.25■□□□□ 0.51
TRO-203ENST00000375022 AKNAQ7Z591 1439 aa18.25■□□□□ 0.51
TRO-203ENST00000375022 FBLN2P98095 1184 aa18.24■□□□□ 0.51
TRO-203ENST00000375022 DISP1Q96F81 1524 aa18.24■□□□□ 0.51
TRO-203ENST00000375022 KIAA0586Q9BVV6 1533 aa18.24■□□□□ 0.51
TRO-203ENST00000375022 NEFLP07196 543 aa18.24■□□□□ 0.51
TRO-203ENST00000375022 CDK11AQ9UQ88 783 aaPredicted RBP18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms