RNA–Protein interactions for RNA: ENST00000374389.8

SRRM1-202, Transcript of serine and arginine repetitive matrix 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SRRM1, Length 3,110 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-202ENST00000374389 IGF1RP08069 1367 aa8.07□□□□□ -1.12
SRRM1-202ENST00000374389 ARHGAP35Q9NRY4 1499 aa8.06□□□□□ -1.12
SRRM1-202ENST00000374389 FGD5Q6ZNL6 1462 aa8.06□□□□□ -1.12
SRRM1-202ENST00000374389 PRDM2Q13029 1718 aa8.05□□□□□ -1.12
SRRM1-202ENST00000374389 DIEXFQ68CQ4 756 aaKnown RBP8.04□□□□□ -1.12
SRRM1-202ENST00000374389 KCNA4P22459 653 aa8.04□□□□□ -1.12
SRRM1-202ENST00000374389 HOXD11P31277 338 aaPredicted RBP8.04□□□□□ -1.12
SRRM1-202ENST00000374389 FANCD2Q9BXW9 1451 aa8.02□□□□□ -1.13
SRRM1-202ENST00000374389 NPM3O75607 178 aaKnown RBP8.02□□□□□ -1.13
SRRM1-202ENST00000374389 CARMIL1Q5VZK9 1371 aa8.01□□□□□ -1.13
SRRM1-202ENST00000374389 NESP48681 1621 aa8.01□□□□□ -1.13
SRRM1-202ENST00000374389 RNF216Q9NWF9 866 aaPredicted RBP8□□□□□ -1.13
SRRM1-202ENST00000374389 ZNF316A6NFI3 1004 aaPredicted RBP8□□□□□ -1.13
SRRM1-202ENST00000374389 RAD54L2Q9Y4B4 1467 aa8□□□□□ -1.13
SRRM1-202ENST00000374389 RRBP1Q9P2E9 1410 aaKnown RBP7.99□□□□□ -1.13
SRRM1-202ENST00000374389 DHX57Q6P158 1386 aaKnown RBP7.98□□□□□ -1.13
SRRM1-202ENST00000374389 ERICH6Q7L0X2 663 aa7.97□□□□□ -1.13
SRRM1-202ENST00000374389 POLA1P09884 1462 aaPredicted RBP7.97□□□□□ -1.13
SRRM1-202ENST00000374389 TOPBP1Q92547 1522 aa7.97□□□□□ -1.13
SRRM1-202ENST00000374389 NEUROD1Q13562 356 aa7.97□□□□□ -1.13
SRRM1-202ENST00000374389 DNMBPQ6XZF7 1577 aa7.97□□□□□ -1.13
SRRM1-202ENST00000374389 CCNB3Q8WWL7 1395 aa7.96□□□□□ -1.14
SRRM1-202ENST00000374389 ABCA10Q8WWZ4 1543 aa7.95□□□□□ -1.14
SRRM1-202ENST00000374389 ACIN1Q9UKV3 1341 aaKnown RBP7.95□□□□□ -1.14
SRRM1-202ENST00000374389 NCBP3Q53F19 620 aaKnown RBP7.94□□□□□ -1.14
SRRM1-202ENST00000374389 TIAM1Q13009 1591 aa7.94□□□□□ -1.14
SRRM1-202ENST00000374389 P3H3Q8IVL6 736 aa7.94□□□□□ -1.14
SRRM1-202ENST00000374389 C1QBPQ07021 282 aaKnown RBP7.93□□□□□ -1.14
SRRM1-202ENST00000374389 URB2Q14146 1524 aaKnown RBP7.93□□□□□ -1.14
SRRM1-202ENST00000374389 FHOD3Q2V2M9 1422 aa7.92□□□□□ -1.14
SRRM1-202ENST00000374389 ITGAEP38570 1179 aa7.92□□□□□ -1.14
SRRM1-202ENST00000374389 PHLDB1Q86UU1 1377 aa7.92□□□□□ -1.14
SRRM1-202ENST00000374389 LRRC9Q6ZRR7 1453 aa7.92□□□□□ -1.14
SRRM1-202ENST00000374389 MAP3K1Q13233 1512 aa7.92□□□□□ -1.14
SRRM1-202ENST00000374389 PCF11O94913 1555 aaKnown RBP7.91□□□□□ -1.14
SRRM1-202ENST00000374389 CLSPNQ9HAW4 1339 aa7.91□□□□□ -1.14
SRRM1-202ENST00000374389 MIER1Q8N108 512 aa7.9□□□□□ -1.14
SRRM1-202ENST00000374389 TDRD9Q8NDG6 1382 aaKnown RBP7.89□□□□□ -1.15
SRRM1-202ENST00000374389 FHAD1B1AJZ9 1412 aa7.89□□□□□ -1.15
SRRM1-202ENST00000374389 LAMC3Q9Y6N6 1575 aa7.89□□□□□ -1.15
SRRM1-202ENST00000374389 RAB3GAP2Q9H2M9 1393 aa7.88□□□□□ -1.15
SRRM1-202ENST00000374389 WDR97A6NE52 1622 aa7.88□□□□□ -1.15
SRRM1-202ENST00000374389 CFAP43Q8NDM7 1665 aa7.87□□□□□ -1.15
SRRM1-202ENST00000374389 CUL7Q14999 1698 aa7.87□□□□□ -1.15
SRRM1-202ENST00000374389 ATP1B4Q9UN42 357 aaPredicted RBP7.87□□□□□ -1.15
SRRM1-202ENST00000374389 MAPKBP1O60336 1514 aa7.86□□□□□ -1.15
SRRM1-202ENST00000374389 EFCAB5A4FU69 1503 aa7.86□□□□□ -1.15
SRRM1-202ENST00000374389 CENPBP07199 599 aaPredicted RBP7.86□□□□□ -1.15
SRRM1-202ENST00000374389 YTHDC1Q96MU7 727 aaKnown RBP7.86□□□□□ -1.15
SRRM1-202ENST00000374389 CASKIN1Q8WXD9 1431 aa7.86□□□□□ -1.15
SRRM1-202ENST00000374389 ABCA5Q8WWZ7 1642 aa7.86□□□□□ -1.15
SRRM1-202ENST00000374389 FYCO1Q9BQS8 1478 aa7.85□□□□□ -1.15
SRRM1-202ENST00000374389 GTF3C3Q9Y5Q9 886 aa7.85□□□□□ -1.15
SRRM1-202ENST00000374389 FAM50AQ14320 339 aaKnown RBP7.85□□□□□ -1.15
SRRM1-202ENST00000374389 GAPVD1Q14C86 1478 aa7.84□□□□□ -1.15
SRRM1-202ENST00000374389 SNAPC4Q5SXM2 1469 aa7.84□□□□□ -1.15
SRRM1-202ENST00000374389 PDS5BQ9NTI5 1447 aa7.84□□□□□ -1.15
SRRM1-202ENST00000374389 AQRO60306 1485 aaKnown RBP eCLIP7.84□□□□□ -1.157e-7■■■■□ 25.1
SRRM1-202ENST00000374389 CTTNBP2Q8WZ74 1663 aa7.84□□□□□ -1.16
SRRM1-202ENST00000374389 SETD5Q9C0A6 1442 aa7.83□□□□□ -1.16
SRRM1-202ENST00000374389 GRWD1Q9BQ67 446 aaKnown RBP eCLIP7.82□□□□□ -1.167e-7■■■□□ 15.1
SRRM1-202ENST00000374389 KIF21AQ7Z4S6 1674 aa7.82□□□□□ -1.16
SRRM1-202ENST00000374389 FMN1Q68DA7 1419 aa7.81□□□□□ -1.16
SRRM1-202ENST00000374389 SAMD9Q5K651 1589 aa7.81□□□□□ -1.16
SRRM1-202ENST00000374389 TARBP1Q13395 1621 aaKnown RBP7.81□□□□□ -1.16
SRRM1-202ENST00000374389 SIN3AQ96ST3 1273 aa7.79□□□□□ -1.16
SRRM1-202ENST00000374389 GRIN2BQ13224 1484 aa7.79□□□□□ -1.16
SRRM1-202ENST00000374389 FGD6Q6ZV73 1430 aa7.79□□□□□ -1.16
SRRM1-202ENST00000374389 PTPRKQ15262 1439 aa7.79□□□□□ -1.16
SRRM1-202ENST00000374389 LRRIQ1Q96JM4 1722 aa7.78□□□□□ -1.16
SRRM1-202ENST00000374389 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.78□□□□□ -1.16
SRRM1-202ENST00000374389 MTUS2Q5JR59 1369 aa7.77□□□□□ -1.16
SRRM1-202ENST00000374389 MAGI3Q5TCQ9 1506 aa7.76□□□□□ -1.17
SRRM1-202ENST00000374389 NCOA2Q15596 1464 aa7.76□□□□□ -1.17
SRRM1-202ENST00000374389 RTN4Q9NQC3 1192 aaKnown RBP7.75□□□□□ -1.17
SRRM1-202ENST00000374389 MRC2Q9UBG0 1479 aa7.74□□□□□ -1.17
SRRM1-202ENST00000374389 MYOM3Q5VTT5 1437 aa7.74□□□□□ -1.17
SRRM1-202ENST00000374389 ADAMTS12P58397 1594 aa7.74□□□□□ -1.17
SRRM1-202ENST00000374389 ZNF608Q9ULD9 1512 aaPredicted RBP7.74□□□□□ -1.17
SRRM1-202ENST00000374389 THOC2Q8NI27 1593 aaKnown RBP7.73□□□□□ -1.17
SRRM1-202ENST00000374389 PBRM1Q86U86 1689 aa7.73□□□□□ -1.17
SRRM1-202ENST00000374389 ARHGEF11O15085 1522 aa7.73□□□□□ -1.17
SRRM1-202ENST00000374389 HFM1A2PYH4 1435 aa7.73□□□□□ -1.17
SRRM1-202ENST00000374389 CCDC18Q5T9S5 1454 aa7.73□□□□□ -1.17
SRRM1-202ENST00000374389 EHBP1L1Q8N3D4 1523 aa7.73□□□□□ -1.17
SRRM1-202ENST00000374389 UGGT2Q9NYU1 1516 aa7.72□□□□□ -1.17
SRRM1-202ENST00000374389 IQGAP2Q13576 1575 aa7.72□□□□□ -1.17
SRRM1-202ENST00000374389 NAIPQ13075 1403 aa7.72□□□□□ -1.17
SRRM1-202ENST00000374389 PTPN23Q9H3S7 1636 aa7.71□□□□□ -1.17
SRRM1-202ENST00000374389 CDK13Q14004 1512 aaKnown RBP7.71□□□□□ -1.18
SRRM1-202ENST00000374389 ARID3CA6NKF2 412 aa7.71□□□□□ -1.18
SRRM1-202ENST00000374389 KCNH8Q96L42 1107 aa7.7□□□□□ -1.18
SRRM1-202ENST00000374389 PPP1R15AO75807 674 aaPredicted RBP7.7□□□□□ -1.18
SRRM1-202ENST00000374389 EPRSP07814 1512 aaKnown RBP7.7□□□□□ -1.18
SRRM1-202ENST00000374389 SUPT6HQ7KZ85 1726 aaKnown RBP7.7□□□□□ -1.18
SRRM1-202ENST00000374389 UACAQ9BZF9 1416 aa7.7□□□□□ -1.18
SRRM1-202ENST00000374389 HIRIP3Q9BW71 556 aaPredicted RBP7.69□□□□□ -1.18
SRRM1-202ENST00000374389 WDR62O43379 1518 aa7.69□□□□□ -1.18
SRRM1-202ENST00000374389 IFT140Q96RY7 1462 aa7.68□□□□□ -1.18
SRRM1-202ENST00000374389 HECW1Q76N89 1606 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms