RNA–Protein interactions for RNA: ENST00000373797.1

EPB41-205, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-205ENST00000373797 WDR97A6NE52 1622 aa25.07■■□□□ 1.6
EPB41-205ENST00000373797 LRRC9Q6ZRR7 1453 aa25.06■■□□□ 1.6
EPB41-205ENST00000373797 P3H3Q8IVL6 736 aa25.06■■□□□ 1.6
EPB41-205ENST00000373797 PCF11O94913 1555 aaKnown RBP25.03■■□□□ 1.6
EPB41-205ENST00000373797 FHOD3Q2V2M9 1422 aa25■■□□□ 1.59
EPB41-205ENST00000373797 PDS5BQ9NTI5 1447 aa25■■□□□ 1.59
EPB41-205ENST00000373797 CTTNBP2Q8WZ74 1663 aa25■■□□□ 1.59
EPB41-205ENST00000373797 CFAP43Q8NDM7 1665 aa24.99■■□□□ 1.59
EPB41-205ENST00000373797 EFCAB5A4FU69 1503 aa24.99■■□□□ 1.59
EPB41-205ENST00000373797 ABCA5Q8WWZ7 1642 aa24.98■■□□□ 1.59
EPB41-205ENST00000373797 TDRD9Q8NDG6 1382 aaKnown RBP24.98■■□□□ 1.59
EPB41-205ENST00000373797 ITGAEP38570 1179 aa24.97■■□□□ 1.59
EPB41-205ENST00000373797 PHLDB1Q86UU1 1377 aa24.97■■□□□ 1.59
EPB41-205ENST00000373797 ACIN1Q9UKV3 1341 aaKnown RBP24.97■■□□□ 1.59
EPB41-205ENST00000373797 NEUROD1Q13562 356 aa24.95■■□□□ 1.59
EPB41-205ENST00000373797 KIF21AQ7Z4S6 1674 aa24.94■■□□□ 1.58
EPB41-205ENST00000373797 PELP1Q8IZL8 1130 aaKnown RBP24.94■■□□□ 1.58
EPB41-205ENST00000373797 GAPVD1Q14C86 1478 aa24.92■■□□□ 1.58
EPB41-205ENST00000373797 FYCO1Q9BQS8 1478 aa24.92■■□□□ 1.58
EPB41-205ENST00000373797 CASKIN1Q8WXD9 1431 aa24.91■■□□□ 1.58
EPB41-205ENST00000373797 AQRO60306 1485 aaKnown RBP eCLIP24.91■■□□□ 1.583e-7■■■■■ 28
EPB41-205ENST00000373797 ATP1B4Q9UN42 357 aaPredicted RBP24.9■■□□□ 1.58
EPB41-205ENST00000373797 RAB3GAP2Q9H2M9 1393 aa24.87■■□□□ 1.57
EPB41-205ENST00000373797 MIER1Q8N108 512 aa24.84■■□□□ 1.57
EPB41-205ENST00000373797 TARBP1Q13395 1621 aaKnown RBP24.83■■□□□ 1.57
EPB41-205ENST00000373797 FMN1Q68DA7 1419 aa24.82■■□□□ 1.56
EPB41-205ENST00000373797 CENPBP07199 599 aaPredicted RBP24.82■■□□□ 1.56
EPB41-205ENST00000373797 SNAPC4Q5SXM2 1469 aa24.81■■□□□ 1.56
EPB41-205ENST00000373797 SAMD9Q5K651 1589 aa24.81■■□□□ 1.56
EPB41-205ENST00000373797 SETD5Q9C0A6 1442 aa24.8■■□□□ 1.56
EPB41-205ENST00000373797 FAM50AQ14320 339 aaKnown RBP24.8■■□□□ 1.56
EPB41-205ENST00000373797 MAPKBP1O60336 1514 aa24.77■■□□□ 1.56
EPB41-205ENST00000373797 LRRIQ1Q96JM4 1722 aa24.72■■□□□ 1.55
EPB41-205ENST00000373797 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.71■■□□□ 1.555e-11■□□□□ 10.7
EPB41-205ENST00000373797 GRIN2BQ13224 1484 aa24.68■■□□□ 1.54
EPB41-205ENST00000373797 PBRM1Q86U86 1689 aa24.67■■□□□ 1.54
EPB41-205ENST00000373797 FGD6Q6ZV73 1430 aa24.65■■□□□ 1.54
EPB41-205ENST00000373797 MTUS2Q5JR59 1369 aa24.64■■□□□ 1.54
EPB41-205ENST00000373797 GTF3C3Q9Y5Q9 886 aa24.64■■□□□ 1.53
EPB41-205ENST00000373797 MRC2Q9UBG0 1479 aa24.64■■□□□ 1.53
EPB41-205ENST00000373797 YTHDC1Q96MU7 727 aaKnown RBP24.63■■□□□ 1.53
EPB41-205ENST00000373797 THOC2Q8NI27 1593 aaKnown RBP24.61■■□□□ 1.53
EPB41-205ENST00000373797 ADAMTS12P58397 1594 aa24.58■■□□□ 1.52
EPB41-205ENST00000373797 NCOA2Q15596 1464 aa24.56■■□□□ 1.52
EPB41-205ENST00000373797 SIN3AQ96ST3 1273 aa24.55■■□□□ 1.52
EPB41-205ENST00000373797 IQGAP2Q13576 1575 aa24.53■■□□□ 1.52
EPB41-205ENST00000373797 PTPRKQ15262 1439 aa24.53■■□□□ 1.52
EPB41-205ENST00000373797 MYOM3Q5VTT5 1437 aa24.51■■□□□ 1.51
EPB41-205ENST00000373797 SUPT6HQ7KZ85 1726 aaKnown RBP24.51■■□□□ 1.51
EPB41-205ENST00000373797 MAGI3Q5TCQ9 1506 aa24.51■■□□□ 1.51
EPB41-205ENST00000373797 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
EPB41-205ENST00000373797 ZNF608Q9ULD9 1512 aaPredicted RBP24.49■■□□□ 1.51
EPB41-205ENST00000373797 ARHGEF11O15085 1522 aa24.48■■□□□ 1.51
EPB41-205ENST00000373797 IFT140Q96RY7 1462 aa24.47■■□□□ 1.51
EPB41-205ENST00000373797 UGGT2Q9NYU1 1516 aa24.47■■□□□ 1.51
EPB41-205ENST00000373797 CCDC18Q5T9S5 1454 aa24.46■■□□□ 1.51
EPB41-205ENST00000373797 WDR62O43379 1518 aa24.46■■□□□ 1.51
EPB41-205ENST00000373797 HFM1A2PYH4 1435 aa24.46■■□□□ 1.51
EPB41-205ENST00000373797 HECW1Q76N89 1606 aa24.43■■□□□ 1.5
EPB41-205ENST00000373797 TIMELESSQ9UNS1 1208 aa24.43■■□□□ 1.5
EPB41-205ENST00000373797 PTPN23Q9H3S7 1636 aa24.42■■□□□ 1.5
EPB41-205ENST00000373797 EPRSP07814 1512 aaKnown RBP24.41■■□□□ 1.5
EPB41-205ENST00000373797 NAIPQ13075 1403 aa24.39■■□□□ 1.5
EPB41-205ENST00000373797 UACAQ9BZF9 1416 aa24.36■■□□□ 1.49
EPB41-205ENST00000373797 CDK13Q14004 1512 aaKnown RBP24.35■■□□□ 1.49
EPB41-205ENST00000373797 PPP1R15AO75807 674 aaPredicted RBP24.34■■□□□ 1.49
EPB41-205ENST00000373797 TCOF1Q13428 1488 aaKnown RBP24.34■■□□□ 1.49
EPB41-205ENST00000373797 KIAA0586Q9BVV6 1533 aa24.33■■□□□ 1.49
EPB41-205ENST00000373797 DISP1Q96F81 1524 aa24.31■■□□□ 1.48
EPB41-205ENST00000373797 EIF4G3O43432 1585 aaKnown RBP24.31■■□□□ 1.48
EPB41-205ENST00000373797 KIAA0556O60303 1618 aa24.28■■□□□ 1.48
EPB41-205ENST00000373797 GRIN2AQ12879 1464 aa24.28■■□□□ 1.48
EPB41-205ENST00000373797 ARID3CA6NKF2 412 aa24.27■■□□□ 1.48
EPB41-205ENST00000373797 MIA2Q96PC5 1412 aa24.25■■□□□ 1.47
EPB41-205ENST00000373797 RRP7BPQ9NSQ0 103 aa24.24■■□□□ 1.47
EPB41-205ENST00000373797 CHIC2Q9UKJ5 165 aa24.23■■□□□ 1.47
EPB41-205ENST00000373797 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
EPB41-205ENST00000373797 GCC2Q8IWJ2 1684 aa24.21■■□□□ 1.47
EPB41-205ENST00000373797 TONSLQ96HA7 1378 aa24.21■■□□□ 1.47
EPB41-205ENST00000373797 NUP153P49790 1475 aaKnown RBP24.2■■□□□ 1.46
EPB41-205ENST00000373797 AKNAQ7Z591 1439 aa24.18■■□□□ 1.46
EPB41-205ENST00000373797 DDX10Q13206 875 aaKnown RBP24.18■■□□□ 1.46
EPB41-205ENST00000373797 MAGI1Q96QZ7 1491 aaPredicted RBP24.17■■□□□ 1.46
EPB41-205ENST00000373797 KDM6BO15054 1643 aa24.17■■□□□ 1.46
EPB41-205ENST00000373797 RAPGEF6Q8TEU7 1601 aa24.17■■□□□ 1.46
EPB41-205ENST00000373797 HIRIP3Q9BW71 556 aaPredicted RBP24.16■■□□□ 1.46
EPB41-205ENST00000373797 DENND4BO75064 1496 aaPredicted RBP24.16■■□□□ 1.46
EPB41-205ENST00000373797 CEP170Q5SW79 1584 aa24.14■■□□□ 1.45
EPB41-205ENST00000373797 KCNH8Q96L42 1107 aa24.13■■□□□ 1.45
EPB41-205ENST00000373797 KDM5BQ9UGL1 1544 aa24.13■■□□□ 1.45
EPB41-205ENST00000373797 SYNJ2O15056 1496 aa24.12■■□□□ 1.45
EPB41-205ENST00000373797 CHMP7Q8WUX9 453 aaPredicted RBP24.12■■□□□ 1.45
EPB41-205ENST00000373797 TRIM52Q96A61 297 aa24.07■■□□□ 1.44
EPB41-205ENST00000373797 DAPK1P53355 1430 aa24.07■■□□□ 1.44
EPB41-205ENST00000373797 ZNF644Q9H582 1327 aaPredicted RBP24.06■■□□□ 1.44
EPB41-205ENST00000373797 CDK11AQ9UQ88 783 aaPredicted RBP24.05■■□□□ 1.44
EPB41-205ENST00000373797 ABCC5O15440 1437 aa24.05■■□□□ 1.44
EPB41-205ENST00000373797 DNMT1P26358 1616 aaKnown RBP24.04■■□□□ 1.44
EPB41-205ENST00000373797 FBLN2P98095 1184 aa24.04■■□□□ 1.44
EPB41-205ENST00000373797 MPHOSPH9Q99550 1183 aa24.04■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 626.5 ms