RNA–Protein interactions for RNA: ENST00000373691.4

CXCR3-201, Transcript of C-X-C motif chemokine receptor 3, humanhuman

TSL 1 (best) BASIC

Gene CXCR3, Length 1,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR3-201ENST00000373691 WDR97A6NE52 1622 aa30.04■■■□□ 2.4
CXCR3-201ENST00000373691 EFCAB5A4FU69 1503 aa30.02■■■□□ 2.4
CXCR3-201ENST00000373691 LRRC9Q6ZRR7 1453 aa30■■■□□ 2.39
CXCR3-201ENST00000373691 PCF11O94913 1555 aaKnown RBP29.99■■■□□ 2.39
CXCR3-201ENST00000373691 CTTNBP2Q8WZ74 1663 aa29.98■■■□□ 2.39
CXCR3-201ENST00000373691 CENPBP07199 599 aaPredicted RBP29.96■■■□□ 2.39
CXCR3-201ENST00000373691 URB2Q14146 1524 aaKnown RBP29.94■■■□□ 2.38
CXCR3-201ENST00000373691 NEUROD1Q13562 356 aa29.93■■■□□ 2.38
CXCR3-201ENST00000373691 AQRO60306 1485 aaKnown RBP eCLIP29.91■■■□□ 2.38
CXCR3-201ENST00000373691 FYCO1Q9BQS8 1478 aa29.9■■■□□ 2.38
CXCR3-201ENST00000373691 ABCA5Q8WWZ7 1642 aa29.89■■■□□ 2.38
CXCR3-201ENST00000373691 CASKIN1Q8WXD9 1431 aa29.84■■■□□ 2.37
CXCR3-201ENST00000373691 FHOD3Q2V2M9 1422 aa29.83■■■□□ 2.37
CXCR3-201ENST00000373691 PDS5BQ9NTI5 1447 aa29.81■■■□□ 2.36
CXCR3-201ENST00000373691 PHLDB1Q86UU1 1377 aa29.81■■■□□ 2.36
CXCR3-201ENST00000373691 RAB3GAP2Q9H2M9 1393 aa29.76■■■□□ 2.35
CXCR3-201ENST00000373691 FMN1Q68DA7 1419 aa29.73■■■□□ 2.35
CXCR3-201ENST00000373691 SAMD9Q5K651 1589 aa29.73■■■□□ 2.35
CXCR3-201ENST00000373691 GAPVD1Q14C86 1478 aa29.72■■■□□ 2.35
CXCR3-201ENST00000373691 SETD5Q9C0A6 1442 aa29.72■■■□□ 2.35
CXCR3-201ENST00000373691 P3H3Q8IVL6 736 aa29.72■■■□□ 2.35
CXCR3-201ENST00000373691 MIER1Q8N108 512 aa29.72■■■□□ 2.35
CXCR3-201ENST00000373691 KIF21AQ7Z4S6 1674 aa29.71■■■□□ 2.35
CXCR3-201ENST00000373691 SNAPC4Q5SXM2 1469 aa29.69■■■□□ 2.34
CXCR3-201ENST00000373691 MAPKBP1O60336 1514 aa29.69■■■□□ 2.34
CXCR3-201ENST00000373691 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.69■■■□□ 2.34
CXCR3-201ENST00000373691 ITGAEP38570 1179 aa29.68■■■□□ 2.34
CXCR3-201ENST00000373691 TARBP1Q13395 1621 aaKnown RBP29.64■■■□□ 2.34
CXCR3-201ENST00000373691 TDRD9Q8NDG6 1382 aaKnown RBP29.64■■■□□ 2.34
CXCR3-201ENST00000373691 THOC2Q8NI27 1593 aaKnown RBP29.61■■■□□ 2.33
CXCR3-201ENST00000373691 GTF3C3Q9Y5Q9 886 aa29.58■■■□□ 2.33
CXCR3-201ENST00000373691 FAM50AQ14320 339 aaKnown RBP29.55■■■□□ 2.32
CXCR3-201ENST00000373691 ATP1B4Q9UN42 357 aaPredicted RBP29.55■■■□□ 2.32
CXCR3-201ENST00000373691 GRIN2BQ13224 1484 aa29.54■■■□□ 2.32
CXCR3-201ENST00000373691 PELP1Q8IZL8 1130 aaKnown RBP29.53■■■□□ 2.32
CXCR3-201ENST00000373691 LRRIQ1Q96JM4 1722 aa29.53■■■□□ 2.32
CXCR3-201ENST00000373691 PBRM1Q86U86 1689 aa29.51■■■□□ 2.32
CXCR3-201ENST00000373691 FGD6Q6ZV73 1430 aa29.51■■■□□ 2.31
CXCR3-201ENST00000373691 DNAJC5BQ9UF47 199 aa29.51■■■□□ 2.31
CXCR3-201ENST00000373691 YTHDC1Q96MU7 727 aaKnown RBP29.45■■■□□ 2.31
CXCR3-201ENST00000373691 EHBP1L1Q8N3D4 1523 aa29.44■■■□□ 2.3
CXCR3-201ENST00000373691 MTUS2Q5JR59 1369 aa29.44■■■□□ 2.3
CXCR3-201ENST00000373691 ADAMTS12P58397 1594 aa29.42■■■□□ 2.3
CXCR3-201ENST00000373691 SUPT6HQ7KZ85 1726 aaKnown RBP29.41■■■□□ 2.3
CXCR3-201ENST00000373691 MRC2Q9UBG0 1479 aa29.41■■■□□ 2.3
CXCR3-201ENST00000373691 NCOA2Q15596 1464 aa29.37■■■□□ 2.29
CXCR3-201ENST00000373691 CCDC18Q5T9S5 1454 aa29.37■■■□□ 2.29
CXCR3-201ENST00000373691 MYOM3Q5VTT5 1437 aa29.36■■■□□ 2.29
CXCR3-201ENST00000373691 TIMELESSQ9UNS1 1208 aa29.36■■■□□ 2.29
CXCR3-201ENST00000373691 IQGAP2Q13576 1575 aa29.35■■■□□ 2.29
CXCR3-201ENST00000373691 ARHGEF11O15085 1522 aa29.34■■■□□ 2.29
CXCR3-201ENST00000373691 HECW1Q76N89 1606 aa29.33■■■□□ 2.29
CXCR3-201ENST00000373691 UGGT2Q9NYU1 1516 aa29.32■■■□□ 2.28
CXCR3-201ENST00000373691 HFM1A2PYH4 1435 aa29.31■■■□□ 2.28
CXCR3-201ENST00000373691 PTPN23Q9H3S7 1636 aa29.3■■■□□ 2.28
CXCR3-201ENST00000373691 MAGI3Q5TCQ9 1506 aa29.26■■■□□ 2.27
CXCR3-201ENST00000373691 PTPRKQ15262 1439 aa29.25■■■□□ 2.27
CXCR3-201ENST00000373691 IFT140Q96RY7 1462 aa29.23■■■□□ 2.27
CXCR3-201ENST00000373691 SIN3AQ96ST3 1273 aa29.23■■■□□ 2.27
CXCR3-201ENST00000373691 UACAQ9BZF9 1416 aa29.22■■■□□ 2.27
CXCR3-201ENST00000373691 TCOF1Q13428 1488 aaKnown RBP29.21■■■□□ 2.27
CXCR3-201ENST00000373691 WDR62O43379 1518 aa29.21■■■□□ 2.27
CXCR3-201ENST00000373691 NAIPQ13075 1403 aa29.17■■■□□ 2.26
CXCR3-201ENST00000373691 EPRSP07814 1512 aaKnown RBP29.17■■■□□ 2.26
CXCR3-201ENST00000373691 GCC2Q8IWJ2 1684 aa29.13■■■□□ 2.25
CXCR3-201ENST00000373691 AKNAQ7Z591 1439 aa29.1■■■□□ 2.25
CXCR3-201ENST00000373691 PPP1R15AO75807 674 aaPredicted RBP29.1■■■□□ 2.25
CXCR3-201ENST00000373691 ZNF608Q9ULD9 1512 aaPredicted RBP29.08■■■□□ 2.25
CXCR3-201ENST00000373691 MIA2Q96PC5 1412 aa29.07■■■□□ 2.24
CXCR3-201ENST00000373691 KIAA0586Q9BVV6 1533 aa29.06■■■□□ 2.24
CXCR3-201ENST00000373691 CDK13Q14004 1512 aaKnown RBP29.05■■■□□ 2.24
CXCR3-201ENST00000373691 KIAA0556O60303 1618 aa29.05■■■□□ 2.24
CXCR3-201ENST00000373691 TONSLQ96HA7 1378 aa29.01■■■□□ 2.23
CXCR3-201ENST00000373691 EIF4G3O43432 1585 aaKnown RBP29■■■□□ 2.23
CXCR3-201ENST00000373691 DISP1Q96F81 1524 aa28.99■■■□□ 2.23
CXCR3-201ENST00000373691 GRIN2AQ12879 1464 aa28.97■■■□□ 2.23
CXCR3-201ENST00000373691 RAPGEF6Q8TEU7 1601 aa28.93■■■□□ 2.22
CXCR3-201ENST00000373691 KDM5BQ9UGL1 1544 aa28.92■■■□□ 2.22
CXCR3-201ENST00000373691 MAGI1Q96QZ7 1491 aaPredicted RBP28.89■■■□□ 2.22
CXCR3-201ENST00000373691 NUP153P49790 1475 aaKnown RBP28.88■■■□□ 2.21
CXCR3-201ENST00000373691 DDX10Q13206 875 aaKnown RBP28.87■■■□□ 2.21
CXCR3-201ENST00000373691 KDM6BO15054 1643 aa28.86■■■□□ 2.21
CXCR3-201ENST00000373691 DENND4BO75064 1496 aaPredicted RBP28.85■■■□□ 2.21
CXCR3-201ENST00000373691 DNMT1P26358 1616 aaKnown RBP28.84■■■□□ 2.21
CXCR3-201ENST00000373691 RRP7BPQ9NSQ0 103 aa28.83■■■□□ 2.21
CXCR3-201ENST00000373691 ROCK1Q13464 1354 aa28.82■■■□□ 2.2
CXCR3-201ENST00000373691 DAPK1P53355 1430 aa28.8■■■□□ 2.2
CXCR3-201ENST00000373691 ERCC6Q03468 1493 aa28.79■■■□□ 2.2
CXCR3-201ENST00000373691 SYNJ2O15056 1496 aa28.78■■■□□ 2.2
CXCR3-201ENST00000373691 CEP170Q5SW79 1584 aa28.78■■■□□ 2.2
CXCR3-201ENST00000373691 CHIC2Q9UKJ5 165 aa28.78■■■□□ 2.2
CXCR3-201ENST00000373691 KCNH8Q96L42 1107 aa28.74■■■□□ 2.19
CXCR3-201ENST00000373691 CCER2I3L3R5 266 aa28.73■■■□□ 2.19
CXCR3-201ENST00000373691 ABCC5O15440 1437 aa28.73■■■□□ 2.19
CXCR3-201ENST00000373691 ADCY10Q96PN6 1610 aa28.73■■■□□ 2.19
CXCR3-201ENST00000373691 CDK11AQ9UQ88 783 aaPredicted RBP28.72■■■□□ 2.19
CXCR3-201ENST00000373691 ITSN2Q9NZM3 1697 aa28.71■■■□□ 2.19
CXCR3-201ENST00000373691 TROQ12816 1431 aaPredicted RBP28.71■■■□□ 2.19
CXCR3-201ENST00000373691 ARID3CA6NKF2 412 aa28.71■■■□□ 2.19
CXCR3-201ENST00000373691 TRIM52Q96A61 297 aa28.7■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms