RNA–Protein interactions for RNA: ENST00000373387.8

GARNL3-202, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GARNL3, Length 3,800 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-202ENST00000373387 CUL7Q14999 1698 aa10.98□□□□□ -0.65
GARNL3-202ENST00000373387 RAB3GAP2Q9H2M9 1393 aa10.98□□□□□ -0.65
GARNL3-202ENST00000373387 EFCAB5A4FU69 1503 aa10.97□□□□□ -0.65
GARNL3-202ENST00000373387 AQRO60306 1485 aaKnown RBP eCLIP10.97□□□□□ -0.65
GARNL3-202ENST00000373387 DNMBPQ6XZF7 1577 aa10.97□□□□□ -0.65
GARNL3-202ENST00000373387 PHLDB1Q86UU1 1377 aa10.96□□□□□ -0.65
GARNL3-202ENST00000373387 ABCA10Q8WWZ4 1543 aa10.96□□□□□ -0.66
GARNL3-202ENST00000373387 FYCO1Q9BQS8 1478 aa10.95□□□□□ -0.66
GARNL3-202ENST00000373387 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.95□□□□□ -0.66
GARNL3-202ENST00000373387 CARMIL1Q5VZK9 1371 aa10.95□□□□□ -0.66
GARNL3-202ENST00000373387 RANGAP1P46060 587 aaPredicted RBP10.95□□□□□ -0.66
GARNL3-202ENST00000373387 SETD5Q9C0A6 1442 aa10.94□□□□□ -0.66
GARNL3-202ENST00000373387 SAMD9Q5K651 1589 aa10.93□□□□□ -0.66
GARNL3-202ENST00000373387 FHAD1B1AJZ9 1412 aa10.93□□□□□ -0.66
GARNL3-202ENST00000373387 SNAPC4Q5SXM2 1469 aa10.92□□□□□ -0.66
GARNL3-202ENST00000373387 MYT1Q01538 1121 aa10.91□□□□□ -0.66
GARNL3-202ENST00000373387 CASKIN1Q8WXD9 1431 aa10.9□□□□□ -0.66
GARNL3-202ENST00000373387 ABCA5Q8WWZ7 1642 aa10.9□□□□□ -0.66
GARNL3-202ENST00000373387 KIF21AQ7Z4S6 1674 aa10.9□□□□□ -0.66
GARNL3-202ENST00000373387 FANCD2Q9BXW9 1451 aa10.89□□□□□ -0.67
GARNL3-202ENST00000373387 TOPBP1Q92547 1522 aa10.89□□□□□ -0.67
GARNL3-202ENST00000373387 SUPT16HQ9Y5B9 1047 aaKnown RBP10.89□□□□□ -0.67
GARNL3-202ENST00000373387 POLA1P09884 1462 aaPredicted RBP10.89□□□□□ -0.67
GARNL3-202ENST00000373387 KDM5BQ9UGL1 1544 aa10.88□□□□□ -0.67
GARNL3-202ENST00000373387 THOC2Q8NI27 1593 aaKnown RBP10.87□□□□□ -0.67
GARNL3-202ENST00000373387 ARHGEF11O15085 1522 aa10.86□□□□□ -0.67
GARNL3-202ENST00000373387 PTPN23Q9H3S7 1636 aa10.85□□□□□ -0.67
GARNL3-202ENST00000373387 RAD54L2Q9Y4B4 1467 aa10.84□□□□□ -0.67
GARNL3-202ENST00000373387 TIMELESSQ9UNS1 1208 aa10.84□□□□□ -0.67
GARNL3-202ENST00000373387 FHOD3Q2V2M9 1422 aa10.84□□□□□ -0.67
GARNL3-202ENST00000373387 GCC2Q8IWJ2 1684 aa10.83□□□□□ -0.68
GARNL3-202ENST00000373387 GRIN2BQ13224 1484 aa10.83□□□□□ -0.68
GARNL3-202ENST00000373387 PPP1R15AO75807 674 aaPredicted RBP10.82□□□□□ -0.68
GARNL3-202ENST00000373387 FGD6Q6ZV73 1430 aa10.81□□□□□ -0.68
GARNL3-202ENST00000373387 LAMC3Q9Y6N6 1575 aa10.81□□□□□ -0.68
GARNL3-202ENST00000373387 HFM1A2PYH4 1435 aa10.81□□□□□ -0.68
GARNL3-202ENST00000373387 PTPRKQ15262 1439 aa10.81□□□□□ -0.68
GARNL3-202ENST00000373387 URB2Q14146 1524 aaKnown RBP10.8□□□□□ -0.68
GARNL3-202ENST00000373387 SUPT6HQ7KZ85 1726 aaKnown RBP10.8□□□□□ -0.68
GARNL3-202ENST00000373387 HECW1Q76N89 1606 aa10.79□□□□□ -0.68
GARNL3-202ENST00000373387 KCNH8Q96L42 1107 aa10.79□□□□□ -0.68
GARNL3-202ENST00000373387 FMN1Q68DA7 1419 aa10.79□□□□□ -0.68
GARNL3-202ENST00000373387 UGGT2Q9NYU1 1516 aa10.78□□□□□ -0.68
GARNL3-202ENST00000373387 MAGI3Q5TCQ9 1506 aa10.77□□□□□ -0.68
GARNL3-202ENST00000373387 EHBP1L1Q8N3D4 1523 aa10.77□□□□□ -0.68
GARNL3-202ENST00000373387 DENND4BO75064 1496 aaPredicted RBP10.77□□□□□ -0.68
GARNL3-202ENST00000373387 CCDC18Q5T9S5 1454 aa10.77□□□□□ -0.68
GARNL3-202ENST00000373387 TARBP1Q13395 1621 aaKnown RBP10.77□□□□□ -0.68
GARNL3-202ENST00000373387 NESP48681 1621 aa10.77□□□□□ -0.69
GARNL3-202ENST00000373387 UACAQ9BZF9 1416 aa10.77□□□□□ -0.69
GARNL3-202ENST00000373387 TCOF1Q13428 1488 aaKnown RBP10.76□□□□□ -0.69
GARNL3-202ENST00000373387 SIN3AQ96ST3 1273 aa10.76□□□□□ -0.69
GARNL3-202ENST00000373387 NAIPQ13075 1403 aa10.75□□□□□ -0.69
GARNL3-202ENST00000373387 PBRM1Q86U86 1689 aa10.75□□□□□ -0.69
GARNL3-202ENST00000373387 TSHZ2Q9NRE2 1034 aa10.74□□□□□ -0.69
GARNL3-202ENST00000373387 NCOA2Q15596 1464 aa10.74□□□□□ -0.69
GARNL3-202ENST00000373387 ITGAEP38570 1179 aa10.74□□□□□ -0.69
GARNL3-202ENST00000373387 POLR1AO95602 1720 aaPredicted RBP10.74□□□□□ -0.69
GARNL3-202ENST00000373387 MYOM3Q5VTT5 1437 aa10.73□□□□□ -0.69
GARNL3-202ENST00000373387 AKNAQ7Z591 1439 aa10.72□□□□□ -0.69
GARNL3-202ENST00000373387 CCER2I3L3R5 266 aa10.72□□□□□ -0.69
GARNL3-202ENST00000373387 KDM6BO15054 1643 aa10.72□□□□□ -0.69
GARNL3-202ENST00000373387 GAPVD1Q14C86 1478 aa10.69□□□□□ -0.7
GARNL3-202ENST00000373387 FAM50AQ14320 339 aaKnown RBP10.69□□□□□ -0.7
GARNL3-202ENST00000373387 ADAMTS12P58397 1594 aa10.67□□□□□ -0.7
GARNL3-202ENST00000373387 DDX10Q13206 875 aaKnown RBP10.67□□□□□ -0.7
GARNL3-202ENST00000373387 WDR62O43379 1518 aa10.67□□□□□ -0.7
GARNL3-202ENST00000373387 P3H3Q8IVL6 736 aa10.66□□□□□ -0.7
GARNL3-202ENST00000373387 IQGAP2Q13576 1575 aa10.65□□□□□ -0.71
GARNL3-202ENST00000373387 MTUS2Q5JR59 1369 aa10.63□□□□□ -0.71
GARNL3-202ENST00000373387 EPRSP07814 1512 aaKnown RBP10.63□□□□□ -0.71
GARNL3-202ENST00000373387 DNMT1P26358 1616 aaKnown RBP10.62□□□□□ -0.71
GARNL3-202ENST00000373387 MIA2Q96PC5 1412 aa10.62□□□□□ -0.71
GARNL3-202ENST00000373387 TONSLQ96HA7 1378 aa10.61□□□□□ -0.71
GARNL3-202ENST00000373387 TDRD9Q8NDG6 1382 aaKnown RBP10.6□□□□□ -0.71
GARNL3-202ENST00000373387 CROCC2H7BZ55 1655 aa10.59□□□□□ -0.71
GARNL3-202ENST00000373387 TEX14Q8IWB6 1497 aa10.59□□□□□ -0.71
GARNL3-202ENST00000373387 PDS5BQ9NTI5 1447 aa10.58□□□□□ -0.72
GARNL3-202ENST00000373387 CDK13Q14004 1512 aaKnown RBP10.58□□□□□ -0.72
GARNL3-202ENST00000373387 ADGBQ8N7X0 1667 aa10.57□□□□□ -0.72
GARNL3-202ENST00000373387 KIAA0556O60303 1618 aa10.57□□□□□ -0.72
GARNL3-202ENST00000373387 HIRIP3Q9BW71 556 aaPredicted RBP10.57□□□□□ -0.72
GARNL3-202ENST00000373387 ADCY10Q96PN6 1610 aa10.57□□□□□ -0.72
GARNL3-202ENST00000373387 NCOA1Q15788 1441 aa10.56□□□□□ -0.72
GARNL3-202ENST00000373387 FKBP8Q14318 412 aa10.56□□□□□ -0.72
GARNL3-202ENST00000373387 ANP32CO43423 234 aa10.56□□□□□ -0.72
GARNL3-202ENST00000373387 ROCK1Q13464 1354 aa10.56□□□□□ -0.72
GARNL3-202ENST00000373387 WASHC2AQ641Q2 1341 aa10.56□□□□□ -0.72
GARNL3-202ENST00000373387 SPATA31E1Q6ZUB1 1445 aa10.55□□□□□ -0.72
GARNL3-202ENST00000373387 RPRD2Q5VT52 1461 aaKnown RBP10.55□□□□□ -0.72
GARNL3-202ENST00000373387 ANP32EQ9BTT0 268 aa10.55□□□□□ -0.72
GARNL3-202ENST00000373387 CNTLNQ9NXG0 1405 aa10.55□□□□□ -0.72
GARNL3-202ENST00000373387 MBD5Q9P267 1494 aa10.55□□□□□ -0.72
GARNL3-202ENST00000373387 DISP1Q96F81 1524 aa10.54□□□□□ -0.72
GARNL3-202ENST00000373387 RAPGEF6Q8TEU7 1601 aa10.53□□□□□ -0.72
GARNL3-202ENST00000373387 DAPK1P53355 1430 aa10.53□□□□□ -0.72
GARNL3-202ENST00000373387 ANKRD30BQ9BXX2 1392 aa10.52□□□□□ -0.73
GARNL3-202ENST00000373387 ATP1B4Q9UN42 357 aaPredicted RBP10.52□□□□□ -0.73
GARNL3-202ENST00000373387 ITSN2Q9NZM3 1697 aa10.52□□□□□ -0.73
GARNL3-202ENST00000373387 NUP153P49790 1475 aaKnown RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms