RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 FAM9BQ8IZU0 186 aa24.68■■□□□ 1.54
TRAF3IP1-201ENST00000373327 FHOD3Q2V2M9 1422 aa24.65■■□□□ 1.54
TRAF3IP1-201ENST00000373327 BICRAQ9NZM4 1560 aa24.64■■□□□ 1.53
TRAF3IP1-201ENST00000373327 DHX57Q6P158 1386 aaKnown RBP24.64■■□□□ 1.53
TRAF3IP1-201ENST00000373327 CADPSQ9ULU8 1353 aa24.63■■□□□ 1.53
TRAF3IP1-201ENST00000373327 FOXD1Q16676 465 aa24.61■■□□□ 1.53
TRAF3IP1-201ENST00000373327 KIF21BO75037 1637 aa24.61■■□□□ 1.53
TRAF3IP1-201ENST00000373327 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
TRAF3IP1-201ENST00000373327 KDM2AQ9Y2K7 1162 aa24.56■■□□□ 1.52
TRAF3IP1-201ENST00000373327 CDK11AQ9UQ88 783 aaPredicted RBP24.55■■□□□ 1.52
TRAF3IP1-201ENST00000373327 EIF4G1Q04637 1599 aaKnown RBP24.54■■□□□ 1.52
TRAF3IP1-201ENST00000373327 IGF1RP08069 1367 aa24.54■■□□□ 1.52
TRAF3IP1-201ENST00000373327 UNC13AQ9UPW8 1703 aa24.53■■□□□ 1.52
TRAF3IP1-201ENST00000373327 SALL2Q9Y467 1007 aaPredicted RBP24.53■■□□□ 1.52
TRAF3IP1-201ENST00000373327 ARAP1Q96P48 1450 aa24.53■■□□□ 1.52
TRAF3IP1-201ENST00000373327 SLC4A1APQ9BWU0 796 aaKnown RBP24.52■■□□□ 1.52
TRAF3IP1-201ENST00000373327 SETD5Q9C0A6 1442 aa24.52■■□□□ 1.52
TRAF3IP1-201ENST00000373327 CLSPNQ9HAW4 1339 aa24.51■■□□□ 1.51
TRAF3IP1-201ENST00000373327 RAD54L2Q9Y4B4 1467 aa24.49■■□□□ 1.51
TRAF3IP1-201ENST00000373327 FHAD1B1AJZ9 1412 aa24.49■■□□□ 1.51
TRAF3IP1-201ENST00000373327 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.49■■□□□ 1.512e-6■■■■□ 19.3
TRAF3IP1-201ENST00000373327 SUPT16HQ9Y5B9 1047 aaKnown RBP24.46■■□□□ 1.51
TRAF3IP1-201ENST00000373327 FGD5Q6ZNL6 1462 aa24.43■■□□□ 1.5
TRAF3IP1-201ENST00000373327 MRS2Q9HD23 443 aa24.41■■□□□ 1.5
TRAF3IP1-201ENST00000373327 NCAPD3P42695 1498 aa24.4■■□□□ 1.5
TRAF3IP1-201ENST00000373327 EIF4G2P78344 907 aaKnown RBP eCLIP24.4■■□□□ 1.56e-9■■■■■ 37.6
TRAF3IP1-201ENST00000373327 FANCD2Q9BXW9 1451 aa24.39■■□□□ 1.49
TRAF3IP1-201ENST00000373327 DNAJC5BQ9UF47 199 aa24.39■■□□□ 1.49
TRAF3IP1-201ENST00000373327 CUX1P39880 1505 aa24.38■■□□□ 1.49
TRAF3IP1-201ENST00000373327 ARHGAP35Q9NRY4 1499 aa24.38■■□□□ 1.49
TRAF3IP1-201ENST00000373327 PHLDB1Q86UU1 1377 aa24.36■■□□□ 1.49
TRAF3IP1-201ENST00000373327 CFDP1Q9UEE9 299 aaPredicted RBP24.34■■□□□ 1.49
TRAF3IP1-201ENST00000373327 NESP48681 1621 aa24.32■■□□□ 1.48
TRAF3IP1-201ENST00000373327 RGL3Q3MIN7 710 aa24.32■■□□□ 1.48
TRAF3IP1-201ENST00000373327 PRXQ9BXM0 1461 aa24.31■■□□□ 1.48
TRAF3IP1-201ENST00000373327 PPP1R15AO75807 674 aaPredicted RBP24.3■■□□□ 1.48
TRAF3IP1-201ENST00000373327 TOP2BQ02880 1626 aa24.29■■□□□ 1.48
TRAF3IP1-201ENST00000373327 TSPY4P0CV99 314 aa24.27■■□□□ 1.48
TRAF3IP1-201ENST00000373327 TSPY10P0CW01 314 aa24.27■■□□□ 1.48
TRAF3IP1-201ENST00000373327 CFTRP13569 1480 aa24.26■■□□□ 1.47
TRAF3IP1-201ENST00000373327 SENP3Q9H4L4 574 aaPredicted RBP24.25■■□□□ 1.47
TRAF3IP1-201ENST00000373327 HSPA5P11021 654 aaKnown RBP24.24■■□□□ 1.47
TRAF3IP1-201ENST00000373327 MYT1Q01538 1121 aa24.24■■□□□ 1.47
TRAF3IP1-201ENST00000373327 PLEKHD1A6NEE1 506 aa24.2■■□□□ 1.46
TRAF3IP1-201ENST00000373327 TMC1Q8TDI8 760 aa24.17■■□□□ 1.46
TRAF3IP1-201ENST00000373327 FMN1Q68DA7 1419 aa24.17■■□□□ 1.46
TRAF3IP1-201ENST00000373327 MPHOSPH9Q99550 1183 aa24.15■■□□□ 1.46
TRAF3IP1-201ENST00000373327 L3MBTL2Q969R5 705 aa24.13■■□□□ 1.45
TRAF3IP1-201ENST00000373327 PDS5BQ9NTI5 1447 aa24.13■■□□□ 1.45
TRAF3IP1-201ENST00000373327 LRRC9Q6ZRR7 1453 aa24.11■■□□□ 1.45
TRAF3IP1-201ENST00000373327 ERICH3Q5RHP9 1530 aa24.1■■□□□ 1.45
TRAF3IP1-201ENST00000373327 ERCC6Q03468 1493 aa24.1■■□□□ 1.45
TRAF3IP1-201ENST00000373327 ZNF644Q9H582 1327 aaPredicted RBP24.09■■□□□ 1.45
TRAF3IP1-201ENST00000373327 CHGAP10645 457 aaKnown RBP24.09■■□□□ 1.45
TRAF3IP1-201ENST00000373327 RRBP1Q9P2E9 1410 aaKnown RBP24.06■■□□□ 1.44
TRAF3IP1-201ENST00000373327 NPM2Q86SE8 214 aaKnown RBP24.05■■□□□ 1.44
TRAF3IP1-201ENST00000373327 CARD11Q9BXL7 1154 aa24.05■■□□□ 1.44
TRAF3IP1-201ENST00000373327 PEG3Q9GZU2 1588 aa24.04■■□□□ 1.44
TRAF3IP1-201ENST00000373327 PKD2Q13563 968 aa24.04■■□□□ 1.44
TRAF3IP1-201ENST00000373327 AQRO60306 1485 aaKnown RBP eCLIP24.03■■□□□ 1.443e-8■■■■□ 21.5
TRAF3IP1-201ENST00000373327 TIMELESSQ9UNS1 1208 aa24.02■■□□□ 1.44
TRAF3IP1-201ENST00000373327 DCAF11Q8TEB1 546 aa24■■□□□ 1.43
TRAF3IP1-201ENST00000373327 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
TRAF3IP1-201ENST00000373327 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
TRAF3IP1-201ENST00000373327 HMGXB3Q12766 1538 aa23.99■■□□□ 1.43
TRAF3IP1-201ENST00000373327 B4GALNT3Q6L9W6 998 aa23.98■■□□□ 1.43
TRAF3IP1-201ENST00000373327 CCDC18Q5T9S5 1454 aa23.98■■□□□ 1.43
TRAF3IP1-201ENST00000373327 CCDC136Q96JN2 1154 aa23.96■■□□□ 1.43
TRAF3IP1-201ENST00000373327 FGD6Q6ZV73 1430 aa23.96■■□□□ 1.43
TRAF3IP1-201ENST00000373327 POLA1P09884 1462 aaPredicted RBP23.96■■□□□ 1.43
TRAF3IP1-201ENST00000373327 TSHZ2Q9NRE2 1034 aa23.94■■□□□ 1.42
TRAF3IP1-201ENST00000373327 CCER2I3L3R5 266 aa23.92■■□□□ 1.42
TRAF3IP1-201ENST00000373327 HNRNPMP52272 730 aaKnown RBP eCLIP23.91■■□□□ 1.422e-7■■■■□ 20.1
TRAF3IP1-201ENST00000373327 TOPBP1Q92547 1522 aa23.9■■□□□ 1.42
TRAF3IP1-201ENST00000373327 DAXXQ9UER7 740 aaPredicted RBP23.9■■□□□ 1.42
TRAF3IP1-201ENST00000373327 BCL11AQ9H165 835 aa23.89■■□□□ 1.41
TRAF3IP1-201ENST00000373327 TIAM1Q13009 1591 aa23.86■■□□□ 1.41
TRAF3IP1-201ENST00000373327 JPH4Q96JJ6 628 aa23.85■■□□□ 1.41
TRAF3IP1-201ENST00000373327 CC2D1BQ5T0F9 858 aaKnown RBP23.85■■□□□ 1.41
TRAF3IP1-201ENST00000373327 WDR97A6NE52 1622 aa23.84■■□□□ 1.41
TRAF3IP1-201ENST00000373327 CASKIN1Q8WXD9 1431 aa23.83■■□□□ 1.4
TRAF3IP1-201ENST00000373327 NCOA2Q15596 1464 aa23.82■■□□□ 1.4
TRAF3IP1-201ENST00000373327 NUP155O75694 1391 aa23.82■■□□□ 1.4
TRAF3IP1-201ENST00000373327 NBR1Q14596 966 aa23.81■■□□□ 1.4
TRAF3IP1-201ENST00000373327 MYOM3Q5VTT5 1437 aa23.8■■□□□ 1.4
TRAF3IP1-201ENST00000373327 RBM19Q9Y4C8 960 aaKnown RBP23.78■■□□□ 1.4
TRAF3IP1-201ENST00000373327 BIVM-ERCC5R4GMW8 1640 aa23.77■■□□□ 1.4
TRAF3IP1-201ENST00000373327 RTL5Q5HYW3 569 aaPredicted RBP23.77■■□□□ 1.4
TRAF3IP1-201ENST00000373327 PCF11O94913 1555 aaKnown RBP23.76■■□□□ 1.39
TRAF3IP1-201ENST00000373327 WASHC2AQ641Q2 1341 aa23.73■■□□□ 1.39
TRAF3IP1-201ENST00000373327 CANXP27824 592 aaKnown RBP23.72■■□□□ 1.39
TRAF3IP1-201ENST00000373327 CCDC184Q52MB2 194 aa23.72■■□□□ 1.39
TRAF3IP1-201ENST00000373327 UACAQ9BZF9 1416 aa23.7■■□□□ 1.39
TRAF3IP1-201ENST00000373327 ANP32AP39687 249 aaKnown RBP23.7■■□□□ 1.38
TRAF3IP1-201ENST00000373327 FYCO1Q9BQS8 1478 aa23.7■■□□□ 1.38
TRAF3IP1-201ENST00000373327 PRKRIP1Q9H875 184 aaPredicted RBP23.68■■□□□ 1.38
TRAF3IP1-201ENST00000373327 ST20-MTHFSA0A0A6YYL1 179 aa23.67■■□□□ 1.38
TRAF3IP1-201ENST00000373327 NBPF8Q3BBV2 869 aa23.66■■□□□ 1.38
TRAF3IP1-201ENST00000373327 PPP4R2Q9NY27 417 aa23.66■■□□□ 1.38
TRAF3IP1-201ENST00000373327 WDR43Q15061 677 aaKnown RBP eCLIP23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms