RNA–Protein interactions for RNA: ENST00000373057.7

FOXP4-202, Transcript of forkhead box P4, humanhuman

TSL 1 (best) BASIC

Gene FOXP4, Length 3,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP4-202ENST00000373057 ARHGAP35Q9NRY4 1499 aa26.44■■□□□ 1.82
FOXP4-202ENST00000373057 CUX1P39880 1505 aa26.44■■□□□ 1.82
FOXP4-202ENST00000373057 ARID3CA6NKF2 412 aa26.41■■□□□ 1.82
FOXP4-202ENST00000373057 CUX2O14529 1486 aa26.4■■□□□ 1.82
FOXP4-202ENST00000373057 SETD5Q9C0A6 1442 aa26.4■■□□□ 1.82
FOXP4-202ENST00000373057 PHLDB1Q86UU1 1377 aa26.39■■□□□ 1.82
FOXP4-202ENST00000373057 HNRNPUQ00839 825 aaKnown RBP eCLIP26.38■■□□□ 1.816e-7■■□□□ 14.5
FOXP4-202ENST00000373057 RBM19Q9Y4C8 960 aaKnown RBP26.37■■□□□ 1.81
FOXP4-202ENST00000373057 SENP3-EIF4A1A0A087X0R7 540 aa26.34■■□□□ 1.81
FOXP4-202ENST00000373057 PRKCSHP14314 528 aaPredicted RBP26.33■■□□□ 1.81
FOXP4-202ENST00000373057 CHIC2Q9UKJ5 165 aa26.32■■□□□ 1.8
FOXP4-202ENST00000373057 WDR97A6NE52 1622 aa26.32■■□□□ 1.8
FOXP4-202ENST00000373057 TONSLQ96HA7 1378 aa26.32■■□□□ 1.8
FOXP4-202ENST00000373057 CARMIL1Q5VZK9 1371 aa26.3■■□□□ 1.8
FOXP4-202ENST00000373057 PPP1R15AO75807 674 aaPredicted RBP26.29■■□□□ 1.8
FOXP4-202ENST00000373057 ERICH3Q5RHP9 1530 aa26.29■■□□□ 1.8
FOXP4-202ENST00000373057 IGF1RP08069 1367 aa26.28■■□□□ 1.8
FOXP4-202ENST00000373057 MAPKBP1O60336 1514 aa26.25■■□□□ 1.79
FOXP4-202ENST00000373057 ERICH6Q7L0X2 663 aa26.23■■□□□ 1.79
FOXP4-202ENST00000373057 POLR3GLQ9BT43 218 aa26.23■■□□□ 1.79
FOXP4-202ENST00000373057 FHOD3Q2V2M9 1422 aa26.22■■□□□ 1.79
FOXP4-202ENST00000373057 BIVM-ERCC5R4GMW8 1640 aa26.22■■□□□ 1.79
FOXP4-202ENST00000373057 RRP7BPQ9NSQ0 103 aa26.22■■□□□ 1.79
FOXP4-202ENST00000373057 FAM9BQ8IZU0 186 aa26.17■■□□□ 1.78
FOXP4-202ENST00000373057 NCAPD3P42695 1498 aa26.13■■□□□ 1.77
FOXP4-202ENST00000373057 LRRC9Q6ZRR7 1453 aa26.12■■□□□ 1.77
FOXP4-202ENST00000373057 FOXD1Q16676 465 aa26.12■■□□□ 1.77
FOXP4-202ENST00000373057 CFTRP13569 1480 aa26.11■■□□□ 1.77
FOXP4-202ENST00000373057 MTUS2Q5JR59 1369 aa26.08■■□□□ 1.77
FOXP4-202ENST00000373057 CDK11AQ9UQ88 783 aaPredicted RBP26.07■■□□□ 1.76
FOXP4-202ENST00000373057 CCER2I3L3R5 266 aa26.05■■□□□ 1.76
FOXP4-202ENST00000373057 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
FOXP4-202ENST00000373057 TIAM1Q13009 1591 aa26.03■■□□□ 1.76
FOXP4-202ENST00000373057 CCDC184Q52MB2 194 aa26.01■■□□□ 1.75
FOXP4-202ENST00000373057 MSH5O43196 834 aa25.99■■□□□ 1.75
FOXP4-202ENST00000373057 RAD54L2Q9Y4B4 1467 aa25.99■■□□□ 1.75
FOXP4-202ENST00000373057 HSPA5P11021 654 aaKnown RBP25.99■■□□□ 1.75
FOXP4-202ENST00000373057 B4GALNT3Q6L9W6 998 aa25.99■■□□□ 1.75
FOXP4-202ENST00000373057 ZNF326Q5BKZ1 582 aaKnown RBP25.99■■□□□ 1.75
FOXP4-202ENST00000373057 FHAD1B1AJZ9 1412 aa25.98■■□□□ 1.75
FOXP4-202ENST00000373057 CADPSQ9ULU8 1353 aa25.97■■□□□ 1.75
FOXP4-202ENST00000373057 MRS2Q9HD23 443 aa25.93■■□□□ 1.74
FOXP4-202ENST00000373057 HMGXB3Q12766 1538 aa25.91■■□□□ 1.74
FOXP4-202ENST00000373057 TIMELESSQ9UNS1 1208 aa25.9■■□□□ 1.74
FOXP4-202ENST00000373057 WASHC2AQ641Q2 1341 aa25.86■■□□□ 1.73
FOXP4-202ENST00000373057 CCDC18Q5T9S5 1454 aa25.86■■□□□ 1.73
FOXP4-202ENST00000373057 EIF4G2P78344 907 aaKnown RBP eCLIP25.85■■□□□ 1.733e-7■■■□□ 17
FOXP4-202ENST00000373057 PCF11O94913 1555 aaKnown RBP25.85■■□□□ 1.73
FOXP4-202ENST00000373057 TDRD9Q8NDG6 1382 aaKnown RBP25.83■■□□□ 1.73
FOXP4-202ENST00000373057 PTPRKQ15262 1439 aa25.82■■□□□ 1.72
FOXP4-202ENST00000373057 NBR1Q14596 966 aa25.81■■□□□ 1.72
FOXP4-202ENST00000373057 FGD6Q6ZV73 1430 aa25.8■■□□□ 1.72
FOXP4-202ENST00000373057 L3MBTL2Q969R5 705 aa25.79■■□□□ 1.72
FOXP4-202ENST00000373057 C11orf95C9JLR9 678 aaPredicted RBP25.78■■□□□ 1.72
FOXP4-202ENST00000373057 NESP48681 1621 aa25.77■■□□□ 1.72
FOXP4-202ENST00000373057 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
FOXP4-202ENST00000373057 AQRO60306 1485 aaKnown RBP eCLIP25.75■■□□□ 1.715e-7■■■■■ 36.1
FOXP4-202ENST00000373057 SALL2Q9Y467 1007 aaPredicted RBP25.74■■□□□ 1.71
FOXP4-202ENST00000373057 DNAJC5BQ9UF47 199 aa25.7■■□□□ 1.7
FOXP4-202ENST00000373057 MPHOSPH9Q99550 1183 aa25.68■■□□□ 1.7
FOXP4-202ENST00000373057 PPP4R2Q9NY27 417 aa25.68■■□□□ 1.7
FOXP4-202ENST00000373057 UACAQ9BZF9 1416 aa25.67■■□□□ 1.7
FOXP4-202ENST00000373057 ZNF777Q9ULD5 760 aaPredicted RBP25.66■■□□□ 1.7
FOXP4-202ENST00000373057 PRKRIP1Q9H875 184 aaPredicted RBP25.65■■□□□ 1.7
FOXP4-202ENST00000373057 CASKIN1Q8WXD9 1431 aa25.64■■□□□ 1.7
FOXP4-202ENST00000373057 SLC4A1APQ9BWU0 796 aaKnown RBP25.63■■□□□ 1.69
FOXP4-202ENST00000373057 NAIPQ13075 1403 aa25.63■■□□□ 1.69
FOXP4-202ENST00000373057 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
FOXP4-202ENST00000373057 MAP3K1Q13233 1512 aa25.61■■□□□ 1.69
FOXP4-202ENST00000373057 FMN1Q68DA7 1419 aa25.6■■□□□ 1.69
FOXP4-202ENST00000373057 NBPF8Q3BBV2 869 aa25.6■■□□□ 1.69
FOXP4-202ENST00000373057 NCOA2Q15596 1464 aa25.59■■□□□ 1.69
FOXP4-202ENST00000373057 HFM1A2PYH4 1435 aa25.58■■□□□ 1.69
FOXP4-202ENST00000373057 NPM2Q86SE8 214 aaKnown RBP25.58■■□□□ 1.68
FOXP4-202ENST00000373057 FYCO1Q9BQS8 1478 aa25.57■■□□□ 1.68
FOXP4-202ENST00000373057 ZNF644Q9H582 1327 aaPredicted RBP25.56■■□□□ 1.68
FOXP4-202ENST00000373057 CCDC136Q96JN2 1154 aa25.55■■□□□ 1.68
FOXP4-202ENST00000373057 MYOM3Q5VTT5 1437 aa25.53■■□□□ 1.68
FOXP4-202ENST00000373057 TOPBP1Q92547 1522 aa25.52■■□□□ 1.68
FOXP4-202ENST00000373057 KDM2AQ9Y2K7 1162 aa25.52■■□□□ 1.68
FOXP4-202ENST00000373057 FANCIQ9NVI1 1328 aa25.51■■□□□ 1.67
FOXP4-202ENST00000373057 PAK3O75914 559 aaPredicted RBP25.48■■□□□ 1.67
FOXP4-202ENST00000373057 CC2D2AQ9P2K1 1620 aa25.48■■□□□ 1.67
FOXP4-202ENST00000373057 KIF7Q2M1P5 1343 aa25.48■■□□□ 1.67
FOXP4-202ENST00000373057 DEKP35659 375 aaKnown RBP25.47■■□□□ 1.67
FOXP4-202ENST00000373057 CFAP43Q8NDM7 1665 aa25.47■■□□□ 1.67
FOXP4-202ENST00000373057 CCDC7Q96M83 1385 aa25.47■■□□□ 1.67
FOXP4-202ENST00000373057 PTPN23Q9H3S7 1636 aa25.45■■□□□ 1.67
FOXP4-202ENST00000373057 AKNAQ7Z591 1439 aa25.44■■□□□ 1.66
FOXP4-202ENST00000373057 CNTLNQ9NXG0 1405 aa25.43■■□□□ 1.66
FOXP4-202ENST00000373057 TMC1Q8TDI8 760 aa25.43■■□□□ 1.66
FOXP4-202ENST00000373057 ABCA10Q8WWZ4 1543 aa25.42■■□□□ 1.66
FOXP4-202ENST00000373057 NOP58Q9Y2X3 529 aaKnown RBP25.4■■□□□ 1.66
FOXP4-202ENST00000373057 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.39■■□□□ 1.66
FOXP4-202ENST00000373057 ZBED9Q6R2W3 1325 aa25.39■■□□□ 1.65
FOXP4-202ENST00000373057 SNAPC4Q5SXM2 1469 aa25.38■■□□□ 1.65
FOXP4-202ENST00000373057 FBLN2P98095 1184 aa25.37■■□□□ 1.65
FOXP4-202ENST00000373057 DNMBPQ6XZF7 1577 aa25.36■■□□□ 1.65
FOXP4-202ENST00000373057 ANP32AP39687 249 aaKnown RBP25.35■■□□□ 1.65
FOXP4-202ENST00000373057 EFCAB5A4FU69 1503 aa25.34■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms