RNA–Protein interactions for RNA: ENST00000372988.8

CCND3-202, Transcript of cyclin D3, humanhuman

TSL 1 (best) BASIC

Gene CCND3, Length 2,133 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND3-202ENST00000372988 CUX1P39880 1505 aa33.86■■■■□ 3.01
CCND3-202ENST00000372988 TIAM1Q13009 1591 aa33.81■■■■□ 3
CCND3-202ENST00000372988 CCER2I3L3R5 266 aa33.81■■■■□ 3
CCND3-202ENST00000372988 NEFLP07196 543 aa33.8■■■■□ 3
CCND3-202ENST00000372988 TIMELESSQ9UNS1 1208 aa33.76■■■■□ 3
CCND3-202ENST00000372988 SIN3AQ96ST3 1273 aa33.73■■■□□ 2.99
CCND3-202ENST00000372988 LRRC9Q6ZRR7 1453 aa33.67■■■□□ 2.98
CCND3-202ENST00000372988 PHLDB1Q86UU1 1377 aa33.64■■■□□ 2.98
CCND3-202ENST00000372988 TRIM52Q96A61 297 aa33.62■■■□□ 2.97
CCND3-202ENST00000372988 ANP32CO43423 234 aa33.61■■■□□ 2.97
CCND3-202ENST00000372988 MSH5O43196 834 aa33.55■■■□□ 2.96
CCND3-202ENST00000372988 CFAP43Q8NDM7 1665 aa33.51■■■□□ 2.95
CCND3-202ENST00000372988 HMGXB3Q12766 1538 aa33.49■■■□□ 2.95
CCND3-202ENST00000372988 HIRIP3Q9BW71 556 aaPredicted RBP33.49■■■□□ 2.95
CCND3-202ENST00000372988 IGF1RP08069 1367 aa33.48■■■□□ 2.95
CCND3-202ENST00000372988 FAM50AQ14320 339 aaKnown RBP33.46■■■□□ 2.95
CCND3-202ENST00000372988 CFTRP13569 1480 aa33.45■■■□□ 2.94
CCND3-202ENST00000372988 FANCIQ9NVI1 1328 aa33.45■■■□□ 2.94
CCND3-202ENST00000372988 NCAPD3P42695 1498 aa33.42■■■□□ 2.94
CCND3-202ENST00000372988 FHAD1B1AJZ9 1412 aa33.4■■■□□ 2.94
CCND3-202ENST00000372988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.39■■■□□ 2.943e-7■□□□□ 10.7
CCND3-202ENST00000372988 PCF11O94913 1555 aaKnown RBP33.35■■■□□ 2.93
CCND3-202ENST00000372988 CARMIL1Q5VZK9 1371 aa33.32■■■□□ 2.92
CCND3-202ENST00000372988 TONSLQ96HA7 1378 aa33.27■■■□□ 2.92
CCND3-202ENST00000372988 CDK11AQ9UQ88 783 aaPredicted RBP33.26■■■□□ 2.91
CCND3-202ENST00000372988 PRDM2Q13029 1718 aa33.22■■■□□ 2.91
CCND3-202ENST00000372988 FYCO1Q9BQS8 1478 aa33.19■■■□□ 2.9
CCND3-202ENST00000372988 HNRNPUQ00839 825 aaKnown RBP eCLIP33.19■■■□□ 2.9
CCND3-202ENST00000372988 ERICH6BQ5W0A0 696 aa33.19■■■□□ 2.9
CCND3-202ENST00000372988 CCDC18Q5T9S5 1454 aa33.16■■■□□ 2.9
CCND3-202ENST00000372988 UACAQ9BZF9 1416 aa33.15■■■□□ 2.9
CCND3-202ENST00000372988 KDM5BQ9UGL1 1544 aa33.14■■■□□ 2.9
CCND3-202ENST00000372988 FGD5Q6ZNL6 1462 aa33.14■■■□□ 2.9
CCND3-202ENST00000372988 AQRO60306 1485 aaKnown RBP eCLIP33.12■■■□□ 2.894e-7■■■■■ 38.3
CCND3-202ENST00000372988 CASKIN1Q8WXD9 1431 aa33.12■■■□□ 2.89
CCND3-202ENST00000372988 IRX6P78412 446 aaPredicted RBP33.11■■■□□ 2.89
CCND3-202ENST00000372988 HFM1A2PYH4 1435 aa33.11■■■□□ 2.89
CCND3-202ENST00000372988 FGD6Q6ZV73 1430 aa33.11■■■□□ 2.89
CCND3-202ENST00000372988 ERICH6Q7L0X2 663 aa33.1■■■□□ 2.89
CCND3-202ENST00000372988 PTPN23Q9H3S7 1636 aa33.07■■■□□ 2.88
CCND3-202ENST00000372988 FHOD3Q2V2M9 1422 aa33.07■■■□□ 2.88
CCND3-202ENST00000372988 P3H3Q8IVL6 736 aa33.05■■■□□ 2.88
CCND3-202ENST00000372988 EFCAB5A4FU69 1503 aa33.05■■■□□ 2.88
CCND3-202ENST00000372988 PPP4R2Q9NY27 417 aa33.04■■■□□ 2.88
CCND3-202ENST00000372988 PTPRKQ15262 1439 aa33.03■■■□□ 2.88
CCND3-202ENST00000372988 MYT1LQ9UL68 1186 aa33.02■■■□□ 2.88
CCND3-202ENST00000372988 ATP1B4Q9UN42 357 aaPredicted RBP33.02■■■□□ 2.88
CCND3-202ENST00000372988 WASHC2AQ641Q2 1341 aa32.97■■■□□ 2.87
CCND3-202ENST00000372988 NAIPQ13075 1403 aa32.96■■■□□ 2.87
CCND3-202ENST00000372988 NCOA2Q15596 1464 aa32.95■■■□□ 2.87
CCND3-202ENST00000372988 HSPA5P11021 654 aaKnown RBP32.89■■■□□ 2.86
CCND3-202ENST00000372988 SNAPC4Q5SXM2 1469 aa32.87■■■□□ 2.85
CCND3-202ENST00000372988 CNTLNQ9NXG0 1405 aa32.87■■■□□ 2.85
CCND3-202ENST00000372988 FMN1Q68DA7 1419 aa32.84■■■□□ 2.85
CCND3-202ENST00000372988 CADPSQ9ULU8 1353 aa32.84■■■□□ 2.85
CCND3-202ENST00000372988 CCDC184Q52MB2 194 aa32.83■■■□□ 2.85
CCND3-202ENST00000372988 CTTNBP2Q8WZ74 1663 aa32.79■■■□□ 2.84
CCND3-202ENST00000372988 MTUS2Q5JR59 1369 aa32.79■■■□□ 2.84
CCND3-202ENST00000372988 MYOM3Q5VTT5 1437 aa32.78■■■□□ 2.84
CCND3-202ENST00000372988 ZBED9Q6R2W3 1325 aa32.77■■■□□ 2.84
CCND3-202ENST00000372988 DEKP35659 375 aaKnown RBP32.77■■■□□ 2.84
CCND3-202ENST00000372988 EIF4G2P78344 907 aaKnown RBP eCLIP32.75■■■□□ 2.83
CCND3-202ENST00000372988 B4GALNT3Q6L9W6 998 aa32.75■■■□□ 2.83
CCND3-202ENST00000372988 CC2D2AQ9P2K1 1620 aa32.74■■■□□ 2.83
CCND3-202ENST00000372988 DENND4BO75064 1496 aaPredicted RBP32.74■■■□□ 2.83
CCND3-202ENST00000372988 PRKRIP1Q9H875 184 aaPredicted RBP32.72■■■□□ 2.83
CCND3-202ENST00000372988 HECW1Q76N89 1606 aa32.72■■■□□ 2.83
CCND3-202ENST00000372988 LRRIQ1Q96JM4 1722 aa32.72■■■□□ 2.83
CCND3-202ENST00000372988 CUL7Q14999 1698 aa32.71■■■□□ 2.83
CCND3-202ENST00000372988 ABCA10Q8WWZ4 1543 aa32.71■■■□□ 2.83
CCND3-202ENST00000372988 NCOA1Q15788 1441 aa32.7■■■□□ 2.83
CCND3-202ENST00000372988 CCDC7Q96M83 1385 aa32.67■■■□□ 2.82
CCND3-202ENST00000372988 SUPT6HQ7KZ85 1726 aaKnown RBP32.66■■■□□ 2.82
CCND3-202ENST00000372988 GCC2Q8IWJ2 1684 aa32.66■■■□□ 2.82
CCND3-202ENST00000372988 NOP58Q9Y2X3 529 aaKnown RBP32.66■■■□□ 2.82
CCND3-202ENST00000372988 GRIN2BQ13224 1484 aa32.64■■■□□ 2.82
CCND3-202ENST00000372988 C11orf95C9JLR9 678 aaPredicted RBP32.63■■■□□ 2.81
CCND3-202ENST00000372988 FAM9BQ8IZU0 186 aa32.63■■■□□ 2.81
CCND3-202ENST00000372988 SAMD9Q5K651 1589 aa32.63■■■□□ 2.81
CCND3-202ENST00000372988 THOC2Q8NI27 1593 aaKnown RBP32.63■■■□□ 2.81
CCND3-202ENST00000372988 MRS2Q9HD23 443 aa32.62■■■□□ 2.81
CCND3-202ENST00000372988 EHBP1L1Q8N3D4 1523 aa32.62■■■□□ 2.81
CCND3-202ENST00000372988 RAD54L2Q9Y4B4 1467 aa32.62■■■□□ 2.81
CCND3-202ENST00000372988 ARHGEF11O15085 1522 aa32.61■■■□□ 2.81
CCND3-202ENST00000372988 UGGT2Q9NYU1 1516 aa32.6■■■□□ 2.81
CCND3-202ENST00000372988 DNMBPQ6XZF7 1577 aa32.58■■■□□ 2.81
CCND3-202ENST00000372988 AKNAQ7Z591 1439 aa32.58■■■□□ 2.81
CCND3-202ENST00000372988 TCOF1Q13428 1488 aaKnown RBP32.57■■■□□ 2.8
CCND3-202ENST00000372988 PAK3O75914 559 aaPredicted RBP32.54■■■□□ 2.8
CCND3-202ENST00000372988 FANCD2Q9BXW9 1451 aa32.53■■■□□ 2.8
CCND3-202ENST00000372988 POLA1P09884 1462 aaPredicted RBP32.53■■■□□ 2.8
CCND3-202ENST00000372988 L3MBTL2Q969R5 705 aa32.53■■■□□ 2.8
CCND3-202ENST00000372988 RRP7BPQ9NSQ0 103 aa32.53■■■□□ 2.8
CCND3-202ENST00000372988 KDM6BO15054 1643 aa32.53■■■□□ 2.8
CCND3-202ENST00000372988 ABCA5Q8WWZ7 1642 aa32.53■■■□□ 2.8
CCND3-202ENST00000372988 SMG6Q86US8 1419 aaKnown RBP32.52■■■□□ 2.8
CCND3-202ENST00000372988 POLR1AO95602 1720 aaPredicted RBP32.48■■■□□ 2.79
CCND3-202ENST00000372988 RNF123Q5XPI4 1314 aa32.46■■■□□ 2.79
CCND3-202ENST00000372988 MPHOSPH9Q99550 1183 aa32.46■■■□□ 2.79
CCND3-202ENST00000372988 MAGI3Q5TCQ9 1506 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms