RNA–Protein interactions for RNA: ENST00000372547.5

SNX21-205, Transcript of sorting nexin family member 21, humanhuman

TSL 1 (best)

Gene SNX21, Length 2,794 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-205ENST00000372547 TOP2BQ02880 1626 aa16.86■□□□□ 0.29
SNX21-205ENST00000372547 MSH5O43196 834 aa16.84■□□□□ 0.29
SNX21-205ENST00000372547 ERICH6Q7L0X2 663 aa16.84■□□□□ 0.29
SNX21-205ENST00000372547 CUX2O14529 1486 aa16.84■□□□□ 0.29
SNX21-205ENST00000372547 NCAPD3P42695 1498 aa16.84■□□□□ 0.29
SNX21-205ENST00000372547 ERICH3Q5RHP9 1530 aa16.84■□□□□ 0.29
SNX21-205ENST00000372547 SETD5Q9C0A6 1442 aa16.83■□□□□ 0.28
SNX21-205ENST00000372547 P3H3Q8IVL6 736 aa16.83■□□□□ 0.28
SNX21-205ENST00000372547 ARHGAP35Q9NRY4 1499 aa16.82■□□□□ 0.28
SNX21-205ENST00000372547 HNRNPUQ00839 825 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNX21-205ENST00000372547 KIF27Q86VH2 1401 aa16.78■□□□□ 0.28
SNX21-205ENST00000372547 CCER2I3L3R5 266 aa16.77■□□□□ 0.28
SNX21-205ENST00000372547 CDK11AQ9UQ88 783 aaPredicted RBP16.76■□□□□ 0.27
SNX21-205ENST00000372547 CUX1P39880 1505 aa16.76■□□□□ 0.27
SNX21-205ENST00000372547 HMGXB3Q12766 1538 aa16.75■□□□□ 0.27
SNX21-205ENST00000372547 PHLDB1Q86UU1 1377 aa16.74■□□□□ 0.27
SNX21-205ENST00000372547 BIVM-ERCC5R4GMW8 1640 aa16.72■□□□□ 0.27
SNX21-205ENST00000372547 CFTRP13569 1480 aa16.7■□□□□ 0.26
SNX21-205ENST00000372547 TONSLQ96HA7 1378 aa16.7■□□□□ 0.26
SNX21-205ENST00000372547 TIAM1Q13009 1591 aa16.66■□□□□ 0.26
SNX21-205ENST00000372547 LRRC9Q6ZRR7 1453 aa16.65■□□□□ 0.26
SNX21-205ENST00000372547 TIMELESSQ9UNS1 1208 aa16.63■□□□□ 0.25
SNX21-205ENST00000372547 FANCIQ9NVI1 1328 aa16.62■□□□□ 0.25
SNX21-205ENST00000372547 CADPSQ9ULU8 1353 aa16.61■□□□□ 0.25
SNX21-205ENST00000372547 CC2D2AQ9P2K1 1620 aa16.59■□□□□ 0.25
SNX21-205ENST00000372547 B4GALNT3Q6L9W6 998 aa16.59■□□□□ 0.25
SNX21-205ENST00000372547 FAM9BQ8IZU0 186 aa16.58■□□□□ 0.24
SNX21-205ENST00000372547 IGF1RP08069 1367 aa16.57■□□□□ 0.24
SNX21-205ENST00000372547 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
SNX21-205ENST00000372547 CARMIL1Q5VZK9 1371 aa16.56■□□□□ 0.24
SNX21-205ENST00000372547 NBR1Q14596 966 aa16.55■□□□□ 0.24
SNX21-205ENST00000372547 CCDC184Q52MB2 194 aa16.55■□□□□ 0.24
SNX21-205ENST00000372547 DNAJC5BQ9UF47 199 aa16.54■□□□□ 0.24
SNX21-205ENST00000372547 PPP4R2Q9NY27 417 aa16.53■□□□□ 0.24
SNX21-205ENST00000372547 DEKP35659 375 aaKnown RBP16.52■□□□□ 0.24
SNX21-205ENST00000372547 NESP48681 1621 aa16.51■□□□□ 0.23
SNX21-205ENST00000372547 FHOD3Q2V2M9 1422 aa16.51■□□□□ 0.23
SNX21-205ENST00000372547 FGD5Q6ZNL6 1462 aa16.51■□□□□ 0.23
SNX21-205ENST00000372547 HSPA5P11021 654 aaKnown RBP16.5■□□□□ 0.23
SNX21-205ENST00000372547 FHAD1B1AJZ9 1412 aa16.5■□□□□ 0.23
SNX21-205ENST00000372547 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
SNX21-205ENST00000372547 PCF11O94913 1555 aaKnown RBP16.49■□□□□ 0.23
SNX21-205ENST00000372547 MAP3K1Q13233 1512 aa16.49■□□□□ 0.23
SNX21-205ENST00000372547 SENP3-EIF4A1A0A087X0R7 540 aa16.48■□□□□ 0.23
SNX21-205ENST00000372547 CCDC18Q5T9S5 1454 aa16.48■□□□□ 0.23
SNX21-205ENST00000372547 CHIC2Q9UKJ5 165 aa16.47■□□□□ 0.23
SNX21-205ENST00000372547 MRS2Q9HD23 443 aa16.46■□□□□ 0.23
SNX21-205ENST00000372547 FANCD2Q9BXW9 1451 aa16.46■□□□□ 0.23
SNX21-205ENST00000372547 RAD54L2Q9Y4B4 1467 aa16.46■□□□□ 0.23
SNX21-205ENST00000372547 RRP7BPQ9NSQ0 103 aa16.45■□□□□ 0.22
SNX21-205ENST00000372547 MTUS2Q5JR59 1369 aa16.42■□□□□ 0.22
SNX21-205ENST00000372547 EIF4G2P78344 907 aaKnown RBP eCLIP16.42■□□□□ 0.22
SNX21-205ENST00000372547 PAK3O75914 559 aaPredicted RBP16.41■□□□□ 0.22
SNX21-205ENST00000372547 NOP58Q9Y2X3 529 aaKnown RBP16.41■□□□□ 0.22
SNX21-205ENST00000372547 PTPRKQ15262 1439 aa16.41■□□□□ 0.22
SNX21-205ENST00000372547 FGD6Q6ZV73 1430 aa16.41■□□□□ 0.22
SNX21-205ENST00000372547 UACAQ9BZF9 1416 aa16.4■□□□□ 0.22
SNX21-205ENST00000372547 FOXD1Q16676 465 aa16.39■□□□□ 0.21
SNX21-205ENST00000372547 CFAP43Q8NDM7 1665 aa16.39■□□□□ 0.21
SNX21-205ENST00000372547 POLR3GLQ9BT43 218 aa16.38■□□□□ 0.21
SNX21-205ENST00000372547 AQRO60306 1485 aaKnown RBP eCLIP16.38■□□□□ 0.21
SNX21-205ENST00000372547 C11orf95C9JLR9 678 aaPredicted RBP16.38■□□□□ 0.21
SNX21-205ENST00000372547 ERICH6BQ5W0A0 696 aa16.38■□□□□ 0.21
SNX21-205ENST00000372547 PRKRIP1Q9H875 184 aaPredicted RBP16.37■□□□□ 0.21
SNX21-205ENST00000372547 PRDM2Q13029 1718 aa16.36■□□□□ 0.21
SNX21-205ENST00000372547 MYT1LQ9UL68 1186 aa16.35■□□□□ 0.21
SNX21-205ENST00000372547 HFM1A2PYH4 1435 aa16.34■□□□□ 0.21
SNX21-205ENST00000372547 NAIPQ13075 1403 aa16.33■□□□□ 0.2
SNX21-205ENST00000372547 FYCO1Q9BQS8 1478 aa16.32■□□□□ 0.2
SNX21-205ENST00000372547 TDRD9Q8NDG6 1382 aaKnown RBP16.32■□□□□ 0.2
SNX21-205ENST00000372547 CNTLNQ9NXG0 1405 aa16.32■□□□□ 0.2
SNX21-205ENST00000372547 L3MBTL2Q969R5 705 aa16.32■□□□□ 0.2
SNX21-205ENST00000372547 CCDC136Q96JN2 1154 aa16.32■□□□□ 0.2
SNX21-205ENST00000372547 PTPN23Q9H3S7 1636 aa16.32■□□□□ 0.2
SNX21-205ENST00000372547 POLA1P09884 1462 aaPredicted RBP16.32■□□□□ 0.2
SNX21-205ENST00000372547 CASKIN1Q8WXD9 1431 aa16.32■□□□□ 0.2
SNX21-205ENST00000372547 ZBED9Q6R2W3 1325 aa16.31■□□□□ 0.2
SNX21-205ENST00000372547 TOPBP1Q92547 1522 aa16.31■□□□□ 0.2
SNX21-205ENST00000372547 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.31■□□□□ 0.2
SNX21-205ENST00000372547 ARID3CA6NKF2 412 aa16.3■□□□□ 0.2
SNX21-205ENST00000372547 ANP32AP39687 249 aaKnown RBP16.3■□□□□ 0.2
SNX21-205ENST00000372547 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
SNX21-205ENST00000372547 FMN1Q68DA7 1419 aa16.29■□□□□ 0.2
SNX21-205ENST00000372547 AKNAQ7Z591 1439 aa16.29■□□□□ 0.2
SNX21-205ENST00000372547 NPM2Q86SE8 214 aaKnown RBP16.27■□□□□ 0.2
SNX21-205ENST00000372547 KDM5BQ9UGL1 1544 aa16.27■□□□□ 0.2
SNX21-205ENST00000372547 CCDC7Q96M83 1385 aa16.27■□□□□ 0.19
SNX21-205ENST00000372547 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
SNX21-205ENST00000372547 DNMBPQ6XZF7 1577 aa16.25■□□□□ 0.19
SNX21-205ENST00000372547 MPHOSPH9Q99550 1183 aa16.25■□□□□ 0.19
SNX21-205ENST00000372547 NCOA2Q15596 1464 aa16.24■□□□□ 0.19
SNX21-205ENST00000372547 ZNF326Q5BKZ1 582 aaKnown RBP16.24■□□□□ 0.19
SNX21-205ENST00000372547 URB2Q14146 1524 aaKnown RBP16.23■□□□□ 0.19
SNX21-205ENST00000372547 MYOM3Q5VTT5 1437 aa16.23■□□□□ 0.19
SNX21-205ENST00000372547 NBPF8Q3BBV2 869 aa16.22■□□□□ 0.19
SNX21-205ENST00000372547 IPO9Q96P70 1041 aaKnown RBP16.22■□□□□ 0.19
SNX21-205ENST00000372547 RTN4Q9NQC3 1192 aaKnown RBP16.22■□□□□ 0.19
SNX21-205ENST00000372547 KIF7Q2M1P5 1343 aa16.21■□□□□ 0.19
SNX21-205ENST00000372547 ABCA10Q8WWZ4 1543 aa16.21■□□□□ 0.19
SNX21-205ENST00000372547 ANO8Q9HCE9 1232 aaPredicted RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms