RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 KIAA0586Q9BVV6 1533 aa26.82■■□□□ 1.88
TMEM53-203ENST00000372242 GOLGA3Q08378 1498 aa26.76■■□□□ 1.88
TMEM53-203ENST00000372242 CTTNBP2Q8WZ74 1663 aa26.75■■□□□ 1.87
TMEM53-203ENST00000372242 IQGAP2Q13576 1575 aa26.74■■□□□ 1.87
TMEM53-203ENST00000372242 JPH4Q96JJ6 628 aa26.74■■□□□ 1.87
TMEM53-203ENST00000372242 UBTFP17480 764 aaKnown RBP26.72■■□□□ 1.87
TMEM53-203ENST00000372242 SHROOM2Q13796 1616 aa26.71■■□□□ 1.87
TMEM53-203ENST00000372242 ARHGEF11O15085 1522 aa26.68■■□□□ 1.86
TMEM53-203ENST00000372242 PRG4Q92954 1404 aaPredicted RBP26.65■■□□□ 1.86
TMEM53-203ENST00000372242 ERCC6L2Q5T890 1561 aa26.65■■□□□ 1.86
TMEM53-203ENST00000372242 RIMBP3CA6NJZ7 1639 aa26.63■■□□□ 1.85
TMEM53-203ENST00000372242 RIMBP3BA6NNM3 1639 aa26.63■■□□□ 1.85
TMEM53-203ENST00000372242 RIMBP3Q9UFD9 1639 aa26.63■■□□□ 1.85
TMEM53-203ENST00000372242 LOC105371045A0A1W2PR82 267 aa26.62■■□□□ 1.85
TMEM53-203ENST00000372242 RANGAP1P46060 587 aaPredicted RBP26.61■■□□□ 1.85
TMEM53-203ENST00000372242 UGGT2Q9NYU1 1516 aa26.58■■□□□ 1.85
TMEM53-203ENST00000372242 DISP1Q96F81 1524 aa26.54■■□□□ 1.84
TMEM53-203ENST00000372242 CARMIL2Q6F5E8 1435 aa26.51■■□□□ 1.83
TMEM53-203ENST00000372242 TNIKQ9UKE5 1360 aa26.5■■□□□ 1.83
TMEM53-203ENST00000372242 ARAP1Q96P48 1450 aa26.49■■□□□ 1.83
TMEM53-203ENST00000372242 KIAA0556O60303 1618 aa26.48■■□□□ 1.83
TMEM53-203ENST00000372242 TTBK1Q5TCY1 1321 aaPredicted RBP26.47■■□□□ 1.83
TMEM53-203ENST00000372242 P3H3Q8IVL6 736 aa26.46■■□□□ 1.83
TMEM53-203ENST00000372242 CYB5RLQ6IPT4 315 aa26.46■■□□□ 1.83
TMEM53-203ENST00000372242 SAMD9Q5K651 1589 aa26.42■■□□□ 1.82
TMEM53-203ENST00000372242 PTPRGP23470 1445 aa26.37■■□□□ 1.81
TMEM53-203ENST00000372242 EFCAB5A4FU69 1503 aa26.36■■□□□ 1.81
TMEM53-203ENST00000372242 ARHGAP35Q9NRY4 1499 aa26.35■■□□□ 1.81
TMEM53-203ENST00000372242 FHOD3Q2V2M9 1422 aa26.34■■□□□ 1.81
TMEM53-203ENST00000372242 CLIP1P30622 1438 aa26.32■■□□□ 1.8
TMEM53-203ENST00000372242 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
TMEM53-203ENST00000372242 PLB1Q6P1J6 1458 aa26.22■■□□□ 1.79
TMEM53-203ENST00000372242 UACAQ9BZF9 1416 aa26.2■■□□□ 1.78
TMEM53-203ENST00000372242 ADCY10Q96PN6 1610 aa26.19■■□□□ 1.78
TMEM53-203ENST00000372242 ABCA8O94911 1581 aa26.16■■□□□ 1.78
TMEM53-203ENST00000372242 ABCC2Q92887 1545 aa26.14■■□□□ 1.77
TMEM53-203ENST00000372242 FMN1Q68DA7 1419 aa26.13■■□□□ 1.77
TMEM53-203ENST00000372242 UHRF1BP1LA0JNW5 1464 aa26.12■■□□□ 1.77
TMEM53-203ENST00000372242 RAPGEF6Q8TEU7 1601 aa26.1■■□□□ 1.77
TMEM53-203ENST00000372242 ARID3CA6NKF2 412 aa26.08■■□□□ 1.77
TMEM53-203ENST00000372242 NPM1P06748 294 aaKnown RBP eCLIP26.05■■□□□ 1.76
TMEM53-203ENST00000372242 ATP1B4Q9UN42 357 aaPredicted RBP26.05■■□□□ 1.76
TMEM53-203ENST00000372242 NUP153P49790 1475 aaKnown RBP26.03■■□□□ 1.76
TMEM53-203ENST00000372242 KDM5BQ9UGL1 1544 aa26.02■■□□□ 1.76
TMEM53-203ENST00000372242 PCF11O94913 1555 aaKnown RBP26.01■■□□□ 1.75
TMEM53-203ENST00000372242 ZCCHC11Q5TAX3 1644 aaKnown RBP25.99■■□□□ 1.75
TMEM53-203ENST00000372242 CASKIN1Q8WXD9 1431 aa25.98■■□□□ 1.75
TMEM53-203ENST00000372242 ATP10BO94823 1461 aa25.97■■□□□ 1.75
TMEM53-203ENST00000372242 HECW1Q76N89 1606 aa25.96■■□□□ 1.75
TMEM53-203ENST00000372242 VPS8Q8N3P4 1428 aa25.94■■□□□ 1.74
TMEM53-203ENST00000372242 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP25.94■■□□□ 1.74
TMEM53-203ENST00000372242 HNRNPUL2Q1KMD3 747 aaKnown RBP25.94■■□□□ 1.74
TMEM53-203ENST00000372242 FYCO1Q9BQS8 1478 aa25.93■■□□□ 1.74
TMEM53-203ENST00000372242 CDK13Q14004 1512 aaKnown RBP25.92■■□□□ 1.74
TMEM53-203ENST00000372242 LRRIQ1Q96JM4 1722 aa25.91■■□□□ 1.74
TMEM53-203ENST00000372242 EPRSP07814 1512 aaKnown RBP25.9■■□□□ 1.74
TMEM53-203ENST00000372242 MAPKBP1O60336 1514 aa25.9■■□□□ 1.74
TMEM53-203ENST00000372242 ASXL2Q76L83 1435 aa25.89■■□□□ 1.74
TMEM53-203ENST00000372242 CCDC18Q5T9S5 1454 aa25.81■■□□□ 1.72
TMEM53-203ENST00000372242 WDR7Q9Y4E6 1490 aa25.8■■□□□ 1.72
TMEM53-203ENST00000372242 TRHP20396 242 aaPredicted RBP25.79■■□□□ 1.72
TMEM53-203ENST00000372242 PLEKHD1A6NEE1 506 aa25.78■■□□□ 1.72
TMEM53-203ENST00000372242 KCNH8Q96L42 1107 aa25.78■■□□□ 1.72
TMEM53-203ENST00000372242 ABCC10Q5T3U5 1492 aa25.74■■□□□ 1.71
TMEM53-203ENST00000372242 CDK11AQ9UQ88 783 aaPredicted RBP25.74■■□□□ 1.71
TMEM53-203ENST00000372242 DIP2BQ9P265 1576 aa25.73■■□□□ 1.71
TMEM53-203ENST00000372242 FAM69CQ0P6D2 419 aa25.72■■□□□ 1.71
TMEM53-203ENST00000372242 MAGI3Q5TCQ9 1506 aa25.71■■□□□ 1.71
TMEM53-203ENST00000372242 KIF13AQ9H1H9 1805 aa25.71■■□□□ 1.71
TMEM53-203ENST00000372242 TIAM1Q13009 1591 aa25.69■■□□□ 1.7
TMEM53-203ENST00000372242 CFAP43Q8NDM7 1665 aa25.68■■□□□ 1.7
TMEM53-203ENST00000372242 TROQ12816 1431 aaPredicted RBP25.67■■□□□ 1.7
TMEM53-203ENST00000372242 APLP2Q06481 763 aa25.65■■□□□ 1.7
TMEM53-203ENST00000372242 MTUS2Q5JR59 1369 aa25.63■■□□□ 1.69
TMEM53-203ENST00000372242 GLI2P10070 1586 aa25.63■■□□□ 1.69
TMEM53-203ENST00000372242 KIF14Q15058 1648 aa25.62■■□□□ 1.69
TMEM53-203ENST00000372242 MAP3K1Q13233 1512 aa25.61■■□□□ 1.69
TMEM53-203ENST00000372242 KANK4Q5T7N3 995 aaPredicted RBP25.61■■□□□ 1.69
TMEM53-203ENST00000372242 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.58■■□□□ 1.69
TMEM53-203ENST00000372242 ABCA9Q8IUA7 1624 aa25.57■■□□□ 1.68
TMEM53-203ENST00000372242 LRRC9Q6ZRR7 1453 aa25.57■■□□□ 1.68
TMEM53-203ENST00000372242 MAP3K4Q9Y6R4 1608 aa25.56■■□□□ 1.68
TMEM53-203ENST00000372242 EHBP1L1Q8N3D4 1523 aa25.56■■□□□ 1.68
TMEM53-203ENST00000372242 TTC37Q6PGP7 1564 aa25.56■■□□□ 1.68
TMEM53-203ENST00000372242 TSPOAP1O95153 1857 aa25.55■■□□□ 1.68
TMEM53-203ENST00000372242 CD109Q6YHK3 1445 aa25.54■■□□□ 1.68
TMEM53-203ENST00000372242 PPARGC1BQ86YN6 1023 aaKnown RBP25.49■■□□□ 1.67
TMEM53-203ENST00000372242 PPRC1Q5VV67 1664 aaKnown RBP25.47■■□□□ 1.67
TMEM53-203ENST00000372242 SUPT6HQ7KZ85 1726 aaKnown RBP25.46■■□□□ 1.67
TMEM53-203ENST00000372242 NCOA2Q15596 1464 aa25.45■■□□□ 1.66
TMEM53-203ENST00000372242 MYO5CQ9NQX4 1742 aa25.43■■□□□ 1.66
TMEM53-203ENST00000372242 PLCH2O75038 1416 aa25.41■■□□□ 1.66
TMEM53-203ENST00000372242 CCNB3Q8WWL7 1395 aa25.41■■□□□ 1.66
TMEM53-203ENST00000372242 CDC42BPAQ5VT25 1732 aa25.4■■□□□ 1.66
TMEM53-203ENST00000372242 GPATCH8Q9UKJ3 1502 aaKnown RBP25.39■■□□□ 1.65
TMEM53-203ENST00000372242 TEX14Q8IWB6 1497 aa25.38■■□□□ 1.65
TMEM53-203ENST00000372242 CDC42BPBQ9Y5S2 1711 aa25.37■■□□□ 1.65
TMEM53-203ENST00000372242 PREX2Q70Z35 1606 aa25.37■■□□□ 1.65
TMEM53-203ENST00000372242 FANCAO15360 1455 aa25.36■■□□□ 1.65
TMEM53-203ENST00000372242 ARHGAP5Q13017 1502 aa25.36■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms