RNA–Protein interactions for RNA: ENST00000372117.6

CDHR1-202, Transcript of cadherin related family member 1, humanhuman

TSL 2

Gene CDHR1, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-202ENST00000372117 ABCC8Q09428 1581 aa12.84□□□□□ -0.35
CDHR1-202ENST00000372117 CLIP1P30622 1438 aa12.83□□□□□ -0.36
CDHR1-202ENST00000372117 TSPY4P0CV99 314 aa12.83□□□□□ -0.36
CDHR1-202ENST00000372117 TSPY10P0CW01 314 aa12.83□□□□□ -0.36
CDHR1-202ENST00000372117 NEFMP07197 916 aa12.83□□□□□ -0.36
CDHR1-202ENST00000372117 ZBTB47Q9UFB7 747 aaPredicted RBP12.83□□□□□ -0.36
CDHR1-202ENST00000372117 PEG3Q9GZU2 1588 aa12.82□□□□□ -0.36
CDHR1-202ENST00000372117 STAG3Q9UJ98 1225 aa12.8□□□□□ -0.36
CDHR1-202ENST00000372117 CANXP27824 592 aaKnown RBP12.79□□□□□ -0.36
CDHR1-202ENST00000372117 CARMIL2Q6F5E8 1435 aa12.78□□□□□ -0.36
CDHR1-202ENST00000372117 GOLGA3Q08378 1498 aa12.77□□□□□ -0.36
CDHR1-202ENST00000372117 ARID4BQ4LE39 1312 aaPredicted RBP12.77□□□□□ -0.37
CDHR1-202ENST00000372117 DDX10Q13206 875 aaKnown RBP12.76□□□□□ -0.37
CDHR1-202ENST00000372117 CYB5RLQ6IPT4 315 aa12.74□□□□□ -0.37
CDHR1-202ENST00000372117 CHIC2Q9UKJ5 165 aa12.74□□□□□ -0.37
CDHR1-202ENST00000372117 CEP162Q5TB80 1403 aa12.73□□□□□ -0.37
CDHR1-202ENST00000372117 CHGAP10645 457 aaKnown RBP12.72□□□□□ -0.37
CDHR1-202ENST00000372117 HNRNPUQ00839 825 aaKnown RBP eCLIP12.71□□□□□ -0.37
CDHR1-202ENST00000372117 JPH4Q96JJ6 628 aa12.71□□□□□ -0.37
CDHR1-202ENST00000372117 HMGXB3Q12766 1538 aa12.7□□□□□ -0.38
CDHR1-202ENST00000372117 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.7□□□□□ -0.38
CDHR1-202ENST00000372117 NESP48681 1621 aa12.69□□□□□ -0.38
CDHR1-202ENST00000372117 TNIKQ9UKE5 1360 aa12.69□□□□□ -0.38
CDHR1-202ENST00000372117 ANP32AP39687 249 aaKnown RBP12.69□□□□□ -0.38
CDHR1-202ENST00000372117 CFDP1Q9UEE9 299 aaPredicted RBP12.69□□□□□ -0.38
CDHR1-202ENST00000372117 FKBP8Q14318 412 aa12.67□□□□□ -0.38
CDHR1-202ENST00000372117 FAM9BQ8IZU0 186 aa12.65□□□□□ -0.38
CDHR1-202ENST00000372117 MRC2Q9UBG0 1479 aa12.65□□□□□ -0.39
CDHR1-202ENST00000372117 TMC1Q8TDI8 760 aa12.64□□□□□ -0.39
CDHR1-202ENST00000372117 SLC24A1O60721 1099 aa12.64□□□□□ -0.39
CDHR1-202ENST00000372117 CFTRP13569 1480 aa12.63□□□□□ -0.39
CDHR1-202ENST00000372117 EIF4G2P78344 907 aaKnown RBP eCLIP12.61□□□□□ -0.39
CDHR1-202ENST00000372117 FGD5Q6ZNL6 1462 aa12.61□□□□□ -0.39
CDHR1-202ENST00000372117 FHAD1B1AJZ9 1412 aa12.61□□□□□ -0.39
CDHR1-202ENST00000372117 GAPVD1Q14C86 1478 aa12.6□□□□□ -0.39
CDHR1-202ENST00000372117 MRS2Q9HD23 443 aa12.6□□□□□ -0.39
CDHR1-202ENST00000372117 RRP7BPQ9NSQ0 103 aa12.58□□□□□ -0.39
CDHR1-202ENST00000372117 MIER1Q8N108 512 aa12.58□□□□□ -0.4
CDHR1-202ENST00000372117 KDM2AQ9Y2K7 1162 aa12.58□□□□□ -0.4
CDHR1-202ENST00000372117 AQRO60306 1485 aaKnown RBP eCLIP12.58□□□□□ -0.4
CDHR1-202ENST00000372117 RAD54L2Q9Y4B4 1467 aa12.58□□□□□ -0.4
CDHR1-202ENST00000372117 RAPGEF2Q9Y4G8 1499 aa12.57□□□□□ -0.4
CDHR1-202ENST00000372117 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.56□□□□□ -0.4
CDHR1-202ENST00000372117 BCL11AQ9H165 835 aa12.56□□□□□ -0.4
CDHR1-202ENST00000372117 PTPRGP23470 1445 aa12.55□□□□□ -0.4
CDHR1-202ENST00000372117 WDR43Q15061 677 aaKnown RBP eCLIP12.54□□□□□ -0.4
CDHR1-202ENST00000372117 CCNB3Q8WWL7 1395 aa12.54□□□□□ -0.4
CDHR1-202ENST00000372117 IFT140Q96RY7 1462 aa12.54□□□□□ -0.4
CDHR1-202ENST00000372117 NPM2Q86SE8 214 aaKnown RBP12.54□□□□□ -0.4
CDHR1-202ENST00000372117 CCDC136Q96JN2 1154 aa12.54□□□□□ -0.4
CDHR1-202ENST00000372117 MLECQ14165 292 aa12.53□□□□□ -0.4
CDHR1-202ENST00000372117 EFCAB2Q5VUJ9 269 aa12.53□□□□□ -0.4
CDHR1-202ENST00000372117 SALL2Q9Y467 1007 aaPredicted RBP12.53□□□□□ -0.4
CDHR1-202ENST00000372117 PPP1R15AO75807 674 aaPredicted RBP12.52□□□□□ -0.4
CDHR1-202ENST00000372117 UPF2Q9HAU5 1272 aaKnown RBP12.52□□□□□ -0.4
CDHR1-202ENST00000372117 LAMC3Q9Y6N6 1575 aa12.52□□□□□ -0.41
CDHR1-202ENST00000372117 GRIN2BQ13224 1484 aa12.51□□□□□ -0.41
CDHR1-202ENST00000372117 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
CDHR1-202ENST00000372117 FMN1Q68DA7 1419 aa12.5□□□□□ -0.41
CDHR1-202ENST00000372117 TOPBP1Q92547 1522 aa12.47□□□□□ -0.41
CDHR1-202ENST00000372117 IGF1RP08069 1367 aa12.45□□□□□ -0.42
CDHR1-202ENST00000372117 HSP90AA1P07900 732 aaKnown RBP12.45□□□□□ -0.42
CDHR1-202ENST00000372117 C14orf37Q86TY3 774 aa12.45□□□□□ -0.42
CDHR1-202ENST00000372117 FAM69CQ0P6D2 419 aa12.44□□□□□ -0.42
CDHR1-202ENST00000372117 CDCA8Q53HL2 280 aa12.44□□□□□ -0.42
CDHR1-202ENST00000372117 SCAF1Q9H7N4 1312 aaKnown RBP12.43□□□□□ -0.42
CDHR1-202ENST00000372117 AEBP2Q6ZN18 517 aaPredicted RBP12.42□□□□□ -0.42
CDHR1-202ENST00000372117 TIMELESSQ9UNS1 1208 aa12.42□□□□□ -0.42
CDHR1-202ENST00000372117 GGT6Q6P531 493 aa12.41□□□□□ -0.42
CDHR1-202ENST00000372117 RGL3Q3MIN7 710 aa12.41□□□□□ -0.42
CDHR1-202ENST00000372117 POLA1P09884 1462 aaPredicted RBP12.41□□□□□ -0.42
CDHR1-202ENST00000372117 FHOD3Q2V2M9 1422 aa12.4□□□□□ -0.42
CDHR1-202ENST00000372117 ANP32BQ92688 251 aaKnown RBP12.39□□□□□ -0.43
CDHR1-202ENST00000372117 VPS8Q8N3P4 1428 aa12.39□□□□□ -0.43
CDHR1-202ENST00000372117 CARD11Q9BXL7 1154 aa12.38□□□□□ -0.43
CDHR1-202ENST00000372117 SENP3Q9H4L4 574 aaPredicted RBP12.38□□□□□ -0.43
CDHR1-202ENST00000372117 KANK1Q14678 1352 aa12.37□□□□□ -0.43
CDHR1-202ENST00000372117 DNMBPQ6XZF7 1577 aa12.37□□□□□ -0.43
CDHR1-202ENST00000372117 SIN3AQ96ST3 1273 aa12.37□□□□□ -0.43
CDHR1-202ENST00000372117 KNSTRNQ9Y448 316 aa12.36□□□□□ -0.43
CDHR1-202ENST00000372117 IRX6P78412 446 aaPredicted RBP12.35□□□□□ -0.43
CDHR1-202ENST00000372117 SNAPC4Q5SXM2 1469 aa12.35□□□□□ -0.43
CDHR1-202ENST00000372117 PRDM2Q13029 1718 aa12.35□□□□□ -0.43
CDHR1-202ENST00000372117 CFAP53Q96M91 514 aa12.35□□□□□ -0.43
CDHR1-202ENST00000372117 HDGFP51858 240 aaKnown RBP12.34□□□□□ -0.43
CDHR1-202ENST00000372117 PRG4Q92954 1404 aaPredicted RBP12.34□□□□□ -0.43
CDHR1-202ENST00000372117 SPAG9O60271 1321 aaKnown RBP12.33□□□□□ -0.44
CDHR1-202ENST00000372117 RSPH4AQ5TD94 716 aa12.32□□□□□ -0.44
CDHR1-202ENST00000372117 MYH16Q9H6N6 1097 aa12.32□□□□□ -0.44
CDHR1-202ENST00000372117 RUSC2Q8N2Y8 1516 aa12.32□□□□□ -0.44
CDHR1-202ENST00000372117 CCDC18Q5T9S5 1454 aa12.31□□□□□ -0.44
CDHR1-202ENST00000372117 SETD5Q9C0A6 1442 aa12.29□□□□□ -0.44
CDHR1-202ENST00000372117 KIF3BO15066 747 aa12.29□□□□□ -0.44
CDHR1-202ENST00000372117 CUX1P39880 1505 aa12.29□□□□□ -0.44
CDHR1-202ENST00000372117 TOP2BQ02880 1626 aa12.28□□□□□ -0.44
CDHR1-202ENST00000372117 HNRNPMP52272 730 aaKnown RBP eCLIP12.28□□□□□ -0.44
CDHR1-202ENST00000372117 ARHGAP35Q9NRY4 1499 aa12.27□□□□□ -0.44
CDHR1-202ENST00000372117 SUPT16HQ9Y5B9 1047 aaKnown RBP12.27□□□□□ -0.45
CDHR1-202ENST00000372117 BIVM-ERCC5R4GMW8 1640 aa12.27□□□□□ -0.45
CDHR1-202ENST00000372117 DDRGK1Q96HY6 314 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms