RNA–Protein interactions for RNA: ENST00000372117.6

CDHR1-202, Transcript of cadherin related family member 1, humanhuman

TSL 2

Gene CDHR1, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR1-202ENST00000372117 NISCHQ9Y2I1 1504 aa17.07■□□□□ 0.32
CDHR1-202ENST00000372117 DCAF8L2P0C7V8 631 aa16.67■□□□□ 0.26
CDHR1-202ENST00000372117 SUPT5HO00267 1087 aaKnown RBP15.51■□□□□ 0.07
CDHR1-202ENST00000372117 SHROOM4Q9ULL8 1493 aa15.31■□□□□ 0.04
CDHR1-202ENST00000372117 ABCC9O60706 1549 aa15.07■□□□□ 0
CDHR1-202ENST00000372117 CCDC180Q9P1Z9 1646 aa14.79□□□□□ -0.04
CDHR1-202ENST00000372117 EHMT2Q96KQ7 1210 aa14.77□□□□□ -0.05
CDHR1-202ENST00000372117 APLP2Q06481 763 aa14.68□□□□□ -0.06
CDHR1-202ENST00000372117 PABPN1Q86U42 306 aaKnown RBP eCLIP14.65□□□□□ -0.06
CDHR1-202ENST00000372117 FAM9AQ8IZU1 332 aaPredicted RBP14.56□□□□□ -0.08
CDHR1-202ENST00000372117 PELP1Q8IZL8 1130 aaKnown RBP14.48□□□□□ -0.09
CDHR1-202ENST00000372117 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
CDHR1-202ENST00000372117 PCGF6Q9BYE7 350 aa14.44□□□□□ -0.1
CDHR1-202ENST00000372117 ZEB1P37275 1124 aaPredicted RBP14.32□□□□□ -0.12
CDHR1-202ENST00000372117 TTBK1Q5TCY1 1321 aaPredicted RBP14.29□□□□□ -0.12
CDHR1-202ENST00000372117 ZCCHC6Q5VYS8 1495 aaKnown RBP14.22□□□□□ -0.13
CDHR1-202ENST00000372117 UBTFP17480 764 aaKnown RBP14.2□□□□□ -0.14
CDHR1-202ENST00000372117 CCER1Q8TC90 406 aaPredicted RBP14.18□□□□□ -0.14
CDHR1-202ENST00000372117 RANGAP1P46060 587 aaPredicted RBP14.18□□□□□ -0.14
CDHR1-202ENST00000372117 RB1CC1Q8TDY2 1594 aa14.16□□□□□ -0.14
CDHR1-202ENST00000372117 CENPBP07199 599 aaPredicted RBP14.13□□□□□ -0.15
CDHR1-202ENST00000372117 SCRIBQ14160 1630 aa14.09□□□□□ -0.15
CDHR1-202ENST00000372117 ATP1B4Q9UN42 357 aaPredicted RBP14.08□□□□□ -0.16
CDHR1-202ENST00000372117 DCAF1Q9Y4B6 1507 aa14.08□□□□□ -0.16
CDHR1-202ENST00000372117 NACADO15069 1562 aa14.02□□□□□ -0.17
CDHR1-202ENST00000372117 TRIM26Q12899 539 aaPredicted RBP13.97□□□□□ -0.17
CDHR1-202ENST00000372117 CHIC1Q5VXU3 224 aa13.95□□□□□ -0.18
CDHR1-202ENST00000372117 MYO15BQ96JP2 1530 aa13.89□□□□□ -0.19
CDHR1-202ENST00000372117 PPARGC1BQ86YN6 1023 aaKnown RBP13.85□□□□□ -0.19
CDHR1-202ENST00000372117 LOC105371045A0A1W2PR82 267 aa13.81□□□□□ -0.2
CDHR1-202ENST00000372117 HRCP23327 699 aa13.8□□□□□ -0.2
CDHR1-202ENST00000372117 FBLN2P98095 1184 aa13.78□□□□□ -0.2
CDHR1-202ENST00000372117 NEFLP07196 543 aa13.77□□□□□ -0.2
CDHR1-202ENST00000372117 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.76□□□□□ -0.21
CDHR1-202ENST00000372117 HNRNPUL2Q1KMD3 747 aaKnown RBP13.76□□□□□ -0.21
CDHR1-202ENST00000372117 ERICH6Q7L0X2 663 aa13.76□□□□□ -0.21
CDHR1-202ENST00000372117 YTHDC1Q96MU7 727 aaKnown RBP13.7□□□□□ -0.22
CDHR1-202ENST00000372117 ITGAEP38570 1179 aa13.65□□□□□ -0.22
CDHR1-202ENST00000372117 MYT1LQ9UL68 1186 aa13.63□□□□□ -0.23
CDHR1-202ENST00000372117 BAZ1BQ9UIG0 1483 aaKnown RBP13.53□□□□□ -0.24
CDHR1-202ENST00000372117 ERCC6Q03468 1493 aa13.5□□□□□ -0.25
CDHR1-202ENST00000372117 MYT1Q01538 1121 aa13.47□□□□□ -0.25
CDHR1-202ENST00000372117 BAZ1AQ9NRL2 1556 aaPredicted RBP13.43□□□□□ -0.26
CDHR1-202ENST00000372117 POLR3GLQ9BT43 218 aa13.43□□□□□ -0.26
CDHR1-202ENST00000372117 RSF1Q96T23 1441 aaPredicted RBP13.39□□□□□ -0.27
CDHR1-202ENST00000372117 DIEXFQ68CQ4 756 aaKnown RBP13.39□□□□□ -0.27
CDHR1-202ENST00000372117 CHMP7Q8WUX9 453 aaPredicted RBP13.38□□□□□ -0.27
CDHR1-202ENST00000372117 NPM1P06748 294 aaKnown RBP eCLIP13.38□□□□□ -0.27
CDHR1-202ENST00000372117 CECR2Q9BXF3 1484 aa13.37□□□□□ -0.27
CDHR1-202ENST00000372117 FAM50AQ14320 339 aaKnown RBP13.37□□□□□ -0.27
CDHR1-202ENST00000372117 CSRNP3Q8WYN3 585 aa13.32□□□□□ -0.28
CDHR1-202ENST00000372117 SMARCA2P51531 1590 aa13.29□□□□□ -0.28
CDHR1-202ENST00000372117 TRIM52Q96A61 297 aa13.27□□□□□ -0.28
CDHR1-202ENST00000372117 P3H3Q8IVL6 736 aa13.27□□□□□ -0.29
CDHR1-202ENST00000372117 DAXXQ9UER7 740 aaPredicted RBP13.27□□□□□ -0.29
CDHR1-202ENST00000372117 PDS5BQ9NTI5 1447 aa13.25□□□□□ -0.29
CDHR1-202ENST00000372117 CNGB1Q14028 1251 aaPredicted RBP13.24□□□□□ -0.29
CDHR1-202ENST00000372117 ARID3CA6NKF2 412 aa13.23□□□□□ -0.29
CDHR1-202ENST00000372117 CDK11AQ9UQ88 783 aaPredicted RBP13.21□□□□□ -0.29
CDHR1-202ENST00000372117 NEUROD1Q13562 356 aa13.21□□□□□ -0.29
CDHR1-202ENST00000372117 MROH2BQ7Z745 1585 aa13.16□□□□□ -0.3
CDHR1-202ENST00000372117 ZNF316A6NFI3 1004 aaPredicted RBP13.15□□□□□ -0.3
CDHR1-202ENST00000372117 SLC4A1APQ9BWU0 796 aaKnown RBP13.15□□□□□ -0.3
CDHR1-202ENST00000372117 ANP32CO43423 234 aa13.13□□□□□ -0.31
CDHR1-202ENST00000372117 ATAD2BQ9ULI0 1458 aa13.13□□□□□ -0.31
CDHR1-202ENST00000372117 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
CDHR1-202ENST00000372117 CADPSQ9ULU8 1353 aa13.11□□□□□ -0.31
CDHR1-202ENST00000372117 UNC13AQ9UPW8 1703 aa13.09□□□□□ -0.31
CDHR1-202ENST00000372117 ESF1Q9H501 851 aaKnown RBP13.06□□□□□ -0.32
CDHR1-202ENST00000372117 ZNF326Q5BKZ1 582 aaKnown RBP13.05□□□□□ -0.32
CDHR1-202ENST00000372117 ZNF777Q9ULD5 760 aaPredicted RBP13.05□□□□□ -0.32
CDHR1-202ENST00000372117 KIF27Q86VH2 1401 aa13.04□□□□□ -0.32
CDHR1-202ENST00000372117 EIF4G1Q04637 1599 aaKnown RBP13.04□□□□□ -0.32
CDHR1-202ENST00000372117 CLSPNQ9HAW4 1339 aa13.03□□□□□ -0.32
CDHR1-202ENST00000372117 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
CDHR1-202ENST00000372117 SMARCA4P51532 1647 aa13□□□□□ -0.33
CDHR1-202ENST00000372117 CCDC88BA6NC98 1476 aa13□□□□□ -0.33
CDHR1-202ENST00000372117 TRHP20396 242 aaPredicted RBP12.99□□□□□ -0.33
CDHR1-202ENST00000372117 BICRAQ9NZM4 1560 aa12.98□□□□□ -0.33
CDHR1-202ENST00000372117 RTL5Q5HYW3 569 aaPredicted RBP12.98□□□□□ -0.33
CDHR1-202ENST00000372117 CEP164Q9UPV0 1460 aa12.97□□□□□ -0.33
CDHR1-202ENST00000372117 NCAPD3P42695 1498 aa12.96□□□□□ -0.33
CDHR1-202ENST00000372117 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
CDHR1-202ENST00000372117 SOGA1O94964 1423 aa12.95□□□□□ -0.34
CDHR1-202ENST00000372117 KCNH8Q96L42 1107 aa12.94□□□□□ -0.34
CDHR1-202ENST00000372117 TOP2AP11388 1531 aaKnown RBP12.94□□□□□ -0.34
CDHR1-202ENST00000372117 TDRD9Q8NDG6 1382 aaKnown RBP12.94□□□□□ -0.34
CDHR1-202ENST00000372117 CUX2O14529 1486 aa12.94□□□□□ -0.34
CDHR1-202ENST00000372117 EEA1Q15075 1411 aa12.93□□□□□ -0.34
CDHR1-202ENST00000372117 ACIN1Q9UKV3 1341 aaKnown RBP12.92□□□□□ -0.34
CDHR1-202ENST00000372117 PLEKHD1A6NEE1 506 aa12.92□□□□□ -0.34
CDHR1-202ENST00000372117 BCANQ96GW7 911 aa12.92□□□□□ -0.34
CDHR1-202ENST00000372117 WIZO95785 1651 aa12.91□□□□□ -0.34
CDHR1-202ENST00000372117 TONSLQ96HA7 1378 aa12.9□□□□□ -0.34
CDHR1-202ENST00000372117 FANCD2Q9BXW9 1451 aa12.9□□□□□ -0.34
CDHR1-202ENST00000372117 PLPPR3Q6T4P5 718 aa12.9□□□□□ -0.34
CDHR1-202ENST00000372117 CC2D2AQ9P2K1 1620 aa12.89□□□□□ -0.35
CDHR1-202ENST00000372117 CARMIL1Q5VZK9 1371 aa12.86□□□□□ -0.35
CDHR1-202ENST00000372117 OSCARQ8IYS5 282 aa12.86□□□□□ -0.35
CDHR1-202ENST00000372117 MTUS2Q5JR59 1369 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms