RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 LRRC9Q6ZRR7 1453 aa33.47■■■□□ 2.95
BRD3-202ENST00000371834 TOPBP1Q92547 1522 aa33.47■■■□□ 2.95
BRD3-202ENST00000371834 POLA1P09884 1462 aaPredicted RBP33.47■■■□□ 2.95
BRD3-202ENST00000371834 PELP1Q8IZL8 1130 aaKnown RBP33.46■■■□□ 2.95
BRD3-202ENST00000371834 ABCA10Q8WWZ4 1543 aa33.44■■■□□ 2.94
BRD3-202ENST00000371834 PHLDB1Q86UU1 1377 aa33.41■■■□□ 2.94
BRD3-202ENST00000371834 FHAD1B1AJZ9 1412 aa33.41■■■□□ 2.94
BRD3-202ENST00000371834 RAB3GAP2Q9H2M9 1393 aa33.4■■■□□ 2.94
BRD3-202ENST00000371834 PCF11O94913 1555 aaKnown RBP33.4■■■□□ 2.94
BRD3-202ENST00000371834 ATP1B4Q9UN42 357 aaPredicted RBP33.39■■■□□ 2.94
BRD3-202ENST00000371834 FHOD3Q2V2M9 1422 aa33.37■■■□□ 2.93
BRD3-202ENST00000371834 CFAP43Q8NDM7 1665 aa33.32■■■□□ 2.92
BRD3-202ENST00000371834 FAM50AQ14320 339 aaKnown RBP33.3■■■□□ 2.92
BRD3-202ENST00000371834 MAPKBP1O60336 1514 aa33.26■■■□□ 2.91
BRD3-202ENST00000371834 SETD5Q9C0A6 1442 aa33.25■■■□□ 2.91
BRD3-202ENST00000371834 CUL7Q14999 1698 aa33.24■■■□□ 2.91
BRD3-202ENST00000371834 URB2Q14146 1524 aaKnown RBP33.22■■■□□ 2.91
BRD3-202ENST00000371834 EFCAB5A4FU69 1503 aa33.21■■■□□ 2.91
BRD3-202ENST00000371834 FYCO1Q9BQS8 1478 aa33.19■■■□□ 2.9
BRD3-202ENST00000371834 CTTNBP2Q8WZ74 1663 aa33.19■■■□□ 2.9
BRD3-202ENST00000371834 CASKIN1Q8WXD9 1431 aa33.17■■■□□ 2.9
BRD3-202ENST00000371834 LAMC3Q9Y6N6 1575 aa33.15■■■□□ 2.9
BRD3-202ENST00000371834 TDRD9Q8NDG6 1382 aaKnown RBP33.14■■■□□ 2.9
BRD3-202ENST00000371834 WDR97A6NE52 1622 aa33.13■■■□□ 2.89
BRD3-202ENST00000371834 AQRO60306 1485 aaKnown RBP eCLIP33.11■■■□□ 2.891e-7■■■□□ 18.2
BRD3-202ENST00000371834 DNAJC5BQ9UF47 199 aa33.08■■■□□ 2.89
BRD3-202ENST00000371834 SIN3AQ96ST3 1273 aa33.05■■■□□ 2.88
BRD3-202ENST00000371834 FMN1Q68DA7 1419 aa33.04■■■□□ 2.88
BRD3-202ENST00000371834 ABCA5Q8WWZ7 1642 aa33.03■■■□□ 2.88
BRD3-202ENST00000371834 SNAPC4Q5SXM2 1469 aa33.02■■■□□ 2.88
BRD3-202ENST00000371834 GAPVD1Q14C86 1478 aa33.01■■■□□ 2.87
BRD3-202ENST00000371834 PDS5BQ9NTI5 1447 aa32.96■■■□□ 2.87
BRD3-202ENST00000371834 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP32.94■■■□□ 2.865e-6■■■■■ 46.2
BRD3-202ENST00000371834 FGD6Q6ZV73 1430 aa32.93■■■□□ 2.86
BRD3-202ENST00000371834 SAMD9Q5K651 1589 aa32.93■■■□□ 2.86
BRD3-202ENST00000371834 MTUS2Q5JR59 1369 aa32.92■■■□□ 2.86
BRD3-202ENST00000371834 KIF21AQ7Z4S6 1674 aa32.89■■■□□ 2.86
BRD3-202ENST00000371834 LRRIQ1Q96JM4 1722 aa32.88■■■□□ 2.85
BRD3-202ENST00000371834 GRIN2BQ13224 1484 aa32.82■■■□□ 2.85
BRD3-202ENST00000371834 PTPRKQ15262 1439 aa32.81■■■□□ 2.84
BRD3-202ENST00000371834 TARBP1Q13395 1621 aaKnown RBP32.78■■■□□ 2.84
BRD3-202ENST00000371834 NCOA2Q15596 1464 aa32.77■■■□□ 2.84
BRD3-202ENST00000371834 KCNH8Q96L42 1107 aa32.74■■■□□ 2.83
BRD3-202ENST00000371834 TIMELESSQ9UNS1 1208 aa32.74■■■□□ 2.83
BRD3-202ENST00000371834 CCDC18Q5T9S5 1454 aa32.73■■■□□ 2.83
BRD3-202ENST00000371834 MYOM3Q5VTT5 1437 aa32.71■■■□□ 2.83
BRD3-202ENST00000371834 DDX10Q13206 875 aaKnown RBP32.71■■■□□ 2.83
BRD3-202ENST00000371834 PPP1R15AO75807 674 aaPredicted RBP32.7■■■□□ 2.83
BRD3-202ENST00000371834 HFM1A2PYH4 1435 aa32.69■■■□□ 2.82
BRD3-202ENST00000371834 THOC2Q8NI27 1593 aaKnown RBP32.69■■■□□ 2.82
BRD3-202ENST00000371834 HIRIP3Q9BW71 556 aaPredicted RBP32.68■■■□□ 2.82
BRD3-202ENST00000371834 SUPT6HQ7KZ85 1726 aaKnown RBP32.67■■■□□ 2.82
BRD3-202ENST00000371834 PTPN23Q9H3S7 1636 aa32.66■■■□□ 2.82
BRD3-202ENST00000371834 EHBP1L1Q8N3D4 1523 aa32.66■■■□□ 2.82
BRD3-202ENST00000371834 MAGI3Q5TCQ9 1506 aa32.65■■■□□ 2.82
BRD3-202ENST00000371834 PBRM1Q86U86 1689 aa32.62■■■□□ 2.81
BRD3-202ENST00000371834 NAIPQ13075 1403 aa32.62■■■□□ 2.81
BRD3-202ENST00000371834 UACAQ9BZF9 1416 aa32.62■■■□□ 2.81
BRD3-202ENST00000371834 UGGT2Q9NYU1 1516 aa32.59■■■□□ 2.81
BRD3-202ENST00000371834 TONSLQ96HA7 1378 aa32.57■■■□□ 2.8
BRD3-202ENST00000371834 ARHGEF11O15085 1522 aa32.55■■■□□ 2.8
BRD3-202ENST00000371834 IQGAP2Q13576 1575 aa32.53■■■□□ 2.8
BRD3-202ENST00000371834 SUPT16HQ9Y5B9 1047 aaKnown RBP32.53■■■□□ 2.8
BRD3-202ENST00000371834 ADAMTS12P58397 1594 aa32.52■■■□□ 2.8
BRD3-202ENST00000371834 HECW1Q76N89 1606 aa32.49■■■□□ 2.79
BRD3-202ENST00000371834 ARID3CA6NKF2 412 aa32.49■■■□□ 2.79
BRD3-202ENST00000371834 RRP7BPQ9NSQ0 103 aa32.49■■■□□ 2.79
BRD3-202ENST00000371834 CHIC2Q9UKJ5 165 aa32.49■■■□□ 2.79
BRD3-202ENST00000371834 MRC2Q9UBG0 1479 aa32.47■■■□□ 2.79
BRD3-202ENST00000371834 EPRSP07814 1512 aaKnown RBP32.47■■■□□ 2.79
BRD3-202ENST00000371834 CDK13Q14004 1512 aaKnown RBP32.45■■■□□ 2.79
BRD3-202ENST00000371834 TCOF1Q13428 1488 aaKnown RBP32.42■■■□□ 2.78
BRD3-202ENST00000371834 ZNF608Q9ULD9 1512 aaPredicted RBP32.38■■■□□ 2.77
BRD3-202ENST00000371834 WDR62O43379 1518 aa32.38■■■□□ 2.77
BRD3-202ENST00000371834 KDM5BQ9UGL1 1544 aa32.33■■■□□ 2.77
BRD3-202ENST00000371834 KDM6BO15054 1643 aa32.32■■■□□ 2.76
BRD3-202ENST00000371834 TRIM52Q96A61 297 aa32.32■■■□□ 2.76
BRD3-202ENST00000371834 GCC2Q8IWJ2 1684 aa32.31■■■□□ 2.76
BRD3-202ENST00000371834 DENND4BO75064 1496 aaPredicted RBP32.3■■■□□ 2.76
BRD3-202ENST00000371834 ANP32CO43423 234 aa32.3■■■□□ 2.76
BRD3-202ENST00000371834 MIA2Q96PC5 1412 aa32.27■■■□□ 2.76
BRD3-202ENST00000371834 IFT140Q96RY7 1462 aa32.26■■■□□ 2.76
BRD3-202ENST00000371834 CCER2I3L3R5 266 aa32.24■■■□□ 2.75
BRD3-202ENST00000371834 AKNAQ7Z591 1439 aa32.23■■■□□ 2.75
BRD3-202ENST00000371834 DISP1Q96F81 1524 aa32.21■■■□□ 2.75
BRD3-202ENST00000371834 KIAA0586Q9BVV6 1533 aa32.19■■■□□ 2.74
BRD3-202ENST00000371834 KIAA0556O60303 1618 aa32.19■■■□□ 2.74
BRD3-202ENST00000371834 MPHOSPH9Q99550 1183 aa32.18■■■□□ 2.74
BRD3-202ENST00000371834 FOXD1Q16676 465 aa32.16■■■□□ 2.74
BRD3-202ENST00000371834 NUP153P49790 1475 aaKnown RBP32.14■■■□□ 2.74
BRD3-202ENST00000371834 ZNF644Q9H582 1327 aaPredicted RBP32.13■■■□□ 2.73
BRD3-202ENST00000371834 GRIN2AQ12879 1464 aa32.11■■■□□ 2.73
BRD3-202ENST00000371834 DAPK1P53355 1430 aa32.1■■■□□ 2.73
BRD3-202ENST00000371834 HSPA5P11021 654 aaKnown RBP32.09■■■□□ 2.73
BRD3-202ENST00000371834 EIF4G3O43432 1585 aaKnown RBP32.09■■■□□ 2.73
BRD3-202ENST00000371834 ABCC5O15440 1437 aa32.07■■■□□ 2.72
BRD3-202ENST00000371834 RAPGEF6Q8TEU7 1601 aa32.07■■■□□ 2.72
BRD3-202ENST00000371834 BCANQ96GW7 911 aa32.05■■■□□ 2.72
BRD3-202ENST00000371834 L3MBTL2Q969R5 705 aa32.05■■■□□ 2.72
BRD3-202ENST00000371834 FKBP8Q14318 412 aa32.04■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms