RNA–Protein interactions for RNA: ENST00000371558.6

UBE2A-202, Transcript of ubiquitin conjugating enzyme E2 A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene UBE2A, Length 1,874 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2A-202ENST00000371558 GRIN2AQ12879 1464 aa22.83■■□□□ 1.25
UBE2A-202ENST00000371558 CHMP7Q8WUX9 453 aaPredicted RBP22.83■■□□□ 1.24
UBE2A-202ENST00000371558 ARHGAP35Q9NRY4 1499 aa22.75■■□□□ 1.23
UBE2A-202ENST00000371558 CHD1O14646 1710 aa22.74■■□□□ 1.23
UBE2A-202ENST00000371558 ARAP1Q96P48 1450 aa22.72■■□□□ 1.23
UBE2A-202ENST00000371558 CEP170Q5SW79 1584 aa22.72■■□□□ 1.23
UBE2A-202ENST00000371558 IQGAP2Q13576 1575 aa22.71■■□□□ 1.23
UBE2A-202ENST00000371558 P3H3Q8IVL6 736 aa22.68■■□□□ 1.22
UBE2A-202ENST00000371558 VPS8Q8N3P4 1428 aa22.66■■□□□ 1.22
UBE2A-202ENST00000371558 KIAA0586Q9BVV6 1533 aa22.66■■□□□ 1.22
UBE2A-202ENST00000371558 EFCAB5A4FU69 1503 aa22.65■■□□□ 1.22
UBE2A-202ENST00000371558 NUP160Q12769 1436 aa22.65■■□□□ 1.22
UBE2A-202ENST00000371558 SAMD9Q5K651 1589 aa22.62■■□□□ 1.21
UBE2A-202ENST00000371558 FHOD3Q2V2M9 1422 aa22.62■■□□□ 1.21
UBE2A-202ENST00000371558 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
UBE2A-202ENST00000371558 UGGT2Q9NYU1 1516 aa22.56■■□□□ 1.2
UBE2A-202ENST00000371558 KIAA0556O60303 1618 aa22.49■■□□□ 1.19
UBE2A-202ENST00000371558 DISP1Q96F81 1524 aa22.49■■□□□ 1.19
UBE2A-202ENST00000371558 JPH4Q96JJ6 628 aa22.49■■□□□ 1.19
UBE2A-202ENST00000371558 PCF11O94913 1555 aaKnown RBP22.46■■□□□ 1.19
UBE2A-202ENST00000371558 TTBK1Q5TCY1 1321 aaPredicted RBP22.46■■□□□ 1.19
UBE2A-202ENST00000371558 APLP2Q06481 763 aa22.45■■□□□ 1.19
UBE2A-202ENST00000371558 FMN1Q68DA7 1419 aa22.44■■□□□ 1.18
UBE2A-202ENST00000371558 ATP1B4Q9UN42 357 aaPredicted RBP22.43■■□□□ 1.18
UBE2A-202ENST00000371558 CLASP1Q7Z460 1538 aa22.41■■□□□ 1.18
UBE2A-202ENST00000371558 CARMIL2Q6F5E8 1435 aa22.4■■□□□ 1.18
UBE2A-202ENST00000371558 SHROOM2Q13796 1616 aa22.38■■□□□ 1.17
UBE2A-202ENST00000371558 CASKIN1Q8WXD9 1431 aa22.38■■□□□ 1.17
UBE2A-202ENST00000371558 PRG4Q92954 1404 aaPredicted RBP22.38■■□□□ 1.17
UBE2A-202ENST00000371558 FYCO1Q9BQS8 1478 aa22.38■■□□□ 1.17
UBE2A-202ENST00000371558 TIAM1Q13009 1591 aa22.32■■□□□ 1.16
UBE2A-202ENST00000371558 LRRIQ1Q96JM4 1722 aa22.32■■□□□ 1.16
UBE2A-202ENST00000371558 ERCC6L2Q5T890 1561 aa22.3■■□□□ 1.16
UBE2A-202ENST00000371558 CFAP43Q8NDM7 1665 aa22.3■■□□□ 1.16
UBE2A-202ENST00000371558 KANK4Q5T7N3 995 aaPredicted RBP22.29■■□□□ 1.16
UBE2A-202ENST00000371558 OSCARQ8IYS5 282 aa22.28■■□□□ 1.16
UBE2A-202ENST00000371558 TRIM26Q12899 539 aaPredicted RBP22.28■■□□□ 1.16
UBE2A-202ENST00000371558 PCGF6Q9BYE7 350 aa22.28■■□□□ 1.16
UBE2A-202ENST00000371558 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
UBE2A-202ENST00000371558 MAP3K1Q13233 1512 aa22.26■■□□□ 1.15
UBE2A-202ENST00000371558 RAPGEF6Q8TEU7 1601 aa22.25■■□□□ 1.15
UBE2A-202ENST00000371558 PLB1Q6P1J6 1458 aa22.23■■□□□ 1.15
UBE2A-202ENST00000371558 ARID3CA6NKF2 412 aa22.22■■□□□ 1.15
UBE2A-202ENST00000371558 PTPRGP23470 1445 aa22.2■■□□□ 1.14
UBE2A-202ENST00000371558 LRRC9Q6ZRR7 1453 aa22.2■■□□□ 1.14
UBE2A-202ENST00000371558 EPRSP07814 1512 aaKnown RBP22.18■■□□□ 1.14
UBE2A-202ENST00000371558 CDK13Q14004 1512 aaKnown RBP22.18■■□□□ 1.14
UBE2A-202ENST00000371558 CCDC18Q5T9S5 1454 aa22.18■■□□□ 1.14
UBE2A-202ENST00000371558 NUP153P49790 1475 aaKnown RBP22.17■■□□□ 1.14
UBE2A-202ENST00000371558 ABCA8O94911 1581 aa22.16■■□□□ 1.14
UBE2A-202ENST00000371558 MTUS2Q5JR59 1369 aa22.11■■□□□ 1.13
UBE2A-202ENST00000371558 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
UBE2A-202ENST00000371558 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
UBE2A-202ENST00000371558 MAGI3Q5TCQ9 1506 aa22.09■■□□□ 1.13
UBE2A-202ENST00000371558 UACAQ9BZF9 1416 aa22.07■■□□□ 1.12
UBE2A-202ENST00000371558 EHBP1L1Q8N3D4 1523 aa22.06■■□□□ 1.12
UBE2A-202ENST00000371558 SUPT6HQ7KZ85 1726 aaKnown RBP22.02■■□□□ 1.12
UBE2A-202ENST00000371558 ABCC2Q92887 1545 aa22.02■■□□□ 1.12
UBE2A-202ENST00000371558 ATP10BO94823 1461 aa22.01■■□□□ 1.11
UBE2A-202ENST00000371558 PHLDB1Q86UU1 1377 aa21.99■■□□□ 1.11
UBE2A-202ENST00000371558 CDK11AQ9UQ88 783 aaPredicted RBP21.98■■□□□ 1.11
UBE2A-202ENST00000371558 NCOA2Q15596 1464 aa21.97■■□□□ 1.11
UBE2A-202ENST00000371558 ARHGEF11O15085 1522 aa21.95■■□□□ 1.1
UBE2A-202ENST00000371558 UHRF1BP1LA0JNW5 1464 aa21.93■■□□□ 1.1
UBE2A-202ENST00000371558 ADCY10Q96PN6 1610 aa21.93■■□□□ 1.1
UBE2A-202ENST00000371558 RRBP1Q9P2E9 1410 aaKnown RBP21.93■■□□□ 1.1
UBE2A-202ENST00000371558 TROQ12816 1431 aaPredicted RBP21.92■■□□□ 1.1
UBE2A-202ENST00000371558 ZCCHC11Q5TAX3 1644 aaKnown RBP21.91■■□□□ 1.1
UBE2A-202ENST00000371558 CCNB3Q8WWL7 1395 aa21.91■■□□□ 1.1
UBE2A-202ENST00000371558 PLEKHD1A6NEE1 506 aa21.9■■□□□ 1.1
UBE2A-202ENST00000371558 KIF14Q15058 1648 aa21.89■■□□□ 1.09
UBE2A-202ENST00000371558 RIMBP3CA6NJZ7 1639 aa21.88■■□□□ 1.09
UBE2A-202ENST00000371558 RIMBP3BA6NNM3 1639 aa21.88■■□□□ 1.09
UBE2A-202ENST00000371558 RIMBP3Q9UFD9 1639 aa21.88■■□□□ 1.09
UBE2A-202ENST00000371558 KDM5BQ9UGL1 1544 aa21.87■■□□□ 1.09
UBE2A-202ENST00000371558 MYOM3Q5VTT5 1437 aa21.85■■□□□ 1.09
UBE2A-202ENST00000371558 FGD6Q6ZV73 1430 aa21.84■■□□□ 1.09
UBE2A-202ENST00000371558 FAM50AQ14320 339 aaKnown RBP21.83■■□□□ 1.08
UBE2A-202ENST00000371558 ITGAEP38570 1179 aa21.8■■□□□ 1.08
UBE2A-202ENST00000371558 PTPN23Q9H3S7 1636 aa21.78■■□□□ 1.08
UBE2A-202ENST00000371558 CYB5RLQ6IPT4 315 aa21.77■■□□□ 1.08
UBE2A-202ENST00000371558 ITSN2Q9NZM3 1697 aa21.76■■□□□ 1.07
UBE2A-202ENST00000371558 KCNH8Q96L42 1107 aa21.75■■□□□ 1.07
UBE2A-202ENST00000371558 CDC42BPAQ5VT25 1732 aa21.74■■□□□ 1.07
UBE2A-202ENST00000371558 ABCC10Q5T3U5 1492 aa21.74■■□□□ 1.07
UBE2A-202ENST00000371558 NPM1P06748 294 aaKnown RBP eCLIP21.73■■□□□ 1.07
UBE2A-202ENST00000371558 GPATCH8Q9UKJ3 1502 aaKnown RBP21.72■■□□□ 1.07
UBE2A-202ENST00000371558 MIA2Q96PC5 1412 aa21.72■■□□□ 1.07
UBE2A-202ENST00000371558 TTC37Q6PGP7 1564 aa21.71■■□□□ 1.07
UBE2A-202ENST00000371558 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.7■■□□□ 1.069e-8■□□□□ 9.9
UBE2A-202ENST00000371558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.69■■□□□ 1.061e-7■■■□□ 17.9
UBE2A-202ENST00000371558 WDR7Q9Y4E6 1490 aa21.69■■□□□ 1.06
UBE2A-202ENST00000371558 TCOF1Q13428 1488 aaKnown RBP21.68■■□□□ 1.06
UBE2A-202ENST00000371558 CFDP1Q9UEE9 299 aaPredicted RBP21.68■■□□□ 1.06
UBE2A-202ENST00000371558 ASXL2Q76L83 1435 aa21.68■■□□□ 1.06
UBE2A-202ENST00000371558 ZNF644Q9H582 1327 aaPredicted RBP21.66■■□□□ 1.06
UBE2A-202ENST00000371558 CDC42BPBQ9Y5S2 1711 aa21.65■■□□□ 1.06
UBE2A-202ENST00000371558 ZNF777Q9ULD5 760 aaPredicted RBP21.65■■□□□ 1.06
UBE2A-202ENST00000371558 PREX2Q70Z35 1606 aa21.65■■□□□ 1.06
UBE2A-202ENST00000371558 MYO5CQ9NQX4 1742 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms