RNA–Protein interactions for RNA: ENST00000371260.8

SPO11-202, Transcript of SPO11, initiator of meiotic double stranded breaks, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SPO11, Length 1,608 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPO11-202ENST00000371260 GTF3C3Q9Y5Q9 886 aa14.82□□□□□ -0.04
SPO11-202ENST00000371260 DHX57Q6P158 1386 aaKnown RBP14.81□□□□□ -0.04
SPO11-202ENST00000371260 ARHGAP35Q9NRY4 1499 aa14.8□□□□□ -0.04
SPO11-202ENST00000371260 CADPSQ9ULU8 1353 aa14.78□□□□□ -0.04
SPO11-202ENST00000371260 CCNB3Q8WWL7 1395 aa14.77□□□□□ -0.05
SPO11-202ENST00000371260 CNKSR2Q8WXI2 1034 aa14.76□□□□□ -0.05
SPO11-202ENST00000371260 IGF1RP08069 1367 aa14.75□□□□□ -0.05
SPO11-202ENST00000371260 KANK4Q5T7N3 995 aaPredicted RBP14.73□□□□□ -0.05
SPO11-202ENST00000371260 MIER1Q8N108 512 aa14.73□□□□□ -0.05
SPO11-202ENST00000371260 FHAD1B1AJZ9 1412 aa14.72□□□□□ -0.05
SPO11-202ENST00000371260 RANGAP1P46060 587 aaPredicted RBP14.71□□□□□ -0.05
SPO11-202ENST00000371260 TIAM1Q13009 1591 aa14.71□□□□□ -0.05
SPO11-202ENST00000371260 CARMIL1Q5VZK9 1371 aa14.7□□□□□ -0.06
SPO11-202ENST00000371260 RNF216Q9NWF9 866 aaPredicted RBP14.7□□□□□ -0.06
SPO11-202ENST00000371260 MYT1Q01538 1121 aa14.67□□□□□ -0.06
SPO11-202ENST00000371260 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
SPO11-202ENST00000371260 LRRC9Q6ZRR7 1453 aa14.64□□□□□ -0.07
SPO11-202ENST00000371260 EFCAB5A4FU69 1503 aa14.64□□□□□ -0.07
SPO11-202ENST00000371260 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.64□□□□□ -0.07
SPO11-202ENST00000371260 CFAP43Q8NDM7 1665 aa14.63□□□□□ -0.07
SPO11-202ENST00000371260 CC2D2AQ9P2K1 1620 aa14.63□□□□□ -0.07
SPO11-202ENST00000371260 TIMELESSQ9UNS1 1208 aa14.63□□□□□ -0.07
SPO11-202ENST00000371260 AQRO60306 1485 aaKnown RBP eCLIP14.62□□□□□ -0.07
SPO11-202ENST00000371260 DNMBPQ6XZF7 1577 aa14.62□□□□□ -0.07
SPO11-202ENST00000371260 ABCA10Q8WWZ4 1543 aa14.61□□□□□ -0.07
SPO11-202ENST00000371260 CUL7Q14999 1698 aa14.6□□□□□ -0.07
SPO11-202ENST00000371260 SETD5Q9C0A6 1442 aa14.6□□□□□ -0.07
SPO11-202ENST00000371260 FYCO1Q9BQS8 1478 aa14.59□□□□□ -0.07
SPO11-202ENST00000371260 FANCD2Q9BXW9 1451 aa14.59□□□□□ -0.07
SPO11-202ENST00000371260 YTHDC1Q96MU7 727 aaKnown RBP14.58□□□□□ -0.08
SPO11-202ENST00000371260 RAB3GAP2Q9H2M9 1393 aa14.57□□□□□ -0.08
SPO11-202ENST00000371260 CASKIN1Q8WXD9 1431 aa14.55□□□□□ -0.08
SPO11-202ENST00000371260 DNAJC5BQ9UF47 199 aa14.54□□□□□ -0.08
SPO11-202ENST00000371260 MAPKBP1O60336 1514 aa14.54□□□□□ -0.08
SPO11-202ENST00000371260 PCF11O94913 1555 aaKnown RBP14.53□□□□□ -0.08
SPO11-202ENST00000371260 FMN1Q68DA7 1419 aa14.52□□□□□ -0.09
SPO11-202ENST00000371260 TOPBP1Q92547 1522 aa14.51□□□□□ -0.09
SPO11-202ENST00000371260 PHLDB1Q86UU1 1377 aa14.51□□□□□ -0.09
SPO11-202ENST00000371260 CTTNBP2Q8WZ74 1663 aa14.51□□□□□ -0.09
SPO11-202ENST00000371260 POLA1P09884 1462 aaPredicted RBP14.49□□□□□ -0.09
SPO11-202ENST00000371260 LAMC3Q9Y6N6 1575 aa14.48□□□□□ -0.09
SPO11-202ENST00000371260 THOC2Q8NI27 1593 aaKnown RBP14.46□□□□□ -0.09
SPO11-202ENST00000371260 WDR97A6NE52 1622 aa14.44□□□□□ -0.1
SPO11-202ENST00000371260 ITGAEP38570 1179 aa14.43□□□□□ -0.1
SPO11-202ENST00000371260 FHOD3Q2V2M9 1422 aa14.41□□□□□ -0.1
SPO11-202ENST00000371260 RAD54L2Q9Y4B4 1467 aa14.41□□□□□ -0.1
SPO11-202ENST00000371260 SAMD9Q5K651 1589 aa14.41□□□□□ -0.1
SPO11-202ENST00000371260 FAM50AQ14320 339 aaKnown RBP14.41□□□□□ -0.1
SPO11-202ENST00000371260 KIF21AQ7Z4S6 1674 aa14.41□□□□□ -0.1
SPO11-202ENST00000371260 SNAPC4Q5SXM2 1469 aa14.4□□□□□ -0.1
SPO11-202ENST00000371260 FGD6Q6ZV73 1430 aa14.4□□□□□ -0.1
SPO11-202ENST00000371260 ABCA5Q8WWZ7 1642 aa14.39□□□□□ -0.11
SPO11-202ENST00000371260 HFM1A2PYH4 1435 aa14.36□□□□□ -0.11
SPO11-202ENST00000371260 PDS5BQ9NTI5 1447 aa14.36□□□□□ -0.11
SPO11-202ENST00000371260 EHBP1L1Q8N3D4 1523 aa14.35□□□□□ -0.11
SPO11-202ENST00000371260 UACAQ9BZF9 1416 aa14.35□□□□□ -0.11
SPO11-202ENST00000371260 MTUS2Q5JR59 1369 aa14.35□□□□□ -0.11
SPO11-202ENST00000371260 PPP1R15AO75807 674 aaPredicted RBP14.34□□□□□ -0.11
SPO11-202ENST00000371260 URB2Q14146 1524 aaKnown RBP14.34□□□□□ -0.11
SPO11-202ENST00000371260 GRIN2BQ13224 1484 aa14.34□□□□□ -0.11
SPO11-202ENST00000371260 CCER2I3L3R5 266 aa14.33□□□□□ -0.11
SPO11-202ENST00000371260 GAPVD1Q14C86 1478 aa14.33□□□□□ -0.12
SPO11-202ENST00000371260 CCDC18Q5T9S5 1454 aa14.33□□□□□ -0.12
SPO11-202ENST00000371260 SUPT6HQ7KZ85 1726 aaKnown RBP14.33□□□□□ -0.12
SPO11-202ENST00000371260 NCBP3Q53F19 620 aaKnown RBP14.33□□□□□ -0.12
SPO11-202ENST00000371260 SUPT16HQ9Y5B9 1047 aaKnown RBP14.33□□□□□ -0.12
SPO11-202ENST00000371260 MYOM3Q5VTT5 1437 aa14.32□□□□□ -0.12
SPO11-202ENST00000371260 P3H3Q8IVL6 736 aa14.32□□□□□ -0.12
SPO11-202ENST00000371260 ATP1B4Q9UN42 357 aaPredicted RBP14.3□□□□□ -0.12
SPO11-202ENST00000371260 PTPN23Q9H3S7 1636 aa14.3□□□□□ -0.12
SPO11-202ENST00000371260 AKNAQ7Z591 1439 aa14.3□□□□□ -0.12
SPO11-202ENST00000371260 NCOA2Q15596 1464 aa14.29□□□□□ -0.12
SPO11-202ENST00000371260 NESP48681 1621 aa14.29□□□□□ -0.12
SPO11-202ENST00000371260 ARHGEF11O15085 1522 aa14.29□□□□□ -0.12
SPO11-202ENST00000371260 TONSLQ96HA7 1378 aa14.28□□□□□ -0.12
SPO11-202ENST00000371260 SIN3AQ96ST3 1273 aa14.27□□□□□ -0.12
SPO11-202ENST00000371260 TCOF1Q13428 1488 aaKnown RBP14.27□□□□□ -0.13
SPO11-202ENST00000371260 UGGT2Q9NYU1 1516 aa14.27□□□□□ -0.13
SPO11-202ENST00000371260 HECW1Q76N89 1606 aa14.25□□□□□ -0.13
SPO11-202ENST00000371260 NAIPQ13075 1403 aa14.25□□□□□ -0.13
SPO11-202ENST00000371260 ANP32CO43423 234 aa14.24□□□□□ -0.13
SPO11-202ENST00000371260 MIA2Q96PC5 1412 aa14.23□□□□□ -0.13
SPO11-202ENST00000371260 DDX10Q13206 875 aaKnown RBP14.23□□□□□ -0.13
SPO11-202ENST00000371260 TARBP1Q13395 1621 aaKnown RBP14.22□□□□□ -0.13
SPO11-202ENST00000371260 LRRIQ1Q96JM4 1722 aa14.22□□□□□ -0.13
SPO11-202ENST00000371260 TDRD9Q8NDG6 1382 aaKnown RBP14.22□□□□□ -0.13
SPO11-202ENST00000371260 GCC2Q8IWJ2 1684 aa14.21□□□□□ -0.13
SPO11-202ENST00000371260 PTPRKQ15262 1439 aa14.2□□□□□ -0.14
SPO11-202ENST00000371260 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.19□□□□□ -0.14
SPO11-202ENST00000371260 IQGAP2Q13576 1575 aa14.18□□□□□ -0.14
SPO11-202ENST00000371260 PBRM1Q86U86 1689 aa14.17□□□□□ -0.14
SPO11-202ENST00000371260 ADAMTS12P58397 1594 aa14.15□□□□□ -0.15
SPO11-202ENST00000371260 EPRSP07814 1512 aaKnown RBP14.14□□□□□ -0.15
SPO11-202ENST00000371260 NEFLP07196 543 aa14.14□□□□□ -0.15
SPO11-202ENST00000371260 ROCK1Q13464 1354 aa14.13□□□□□ -0.15
SPO11-202ENST00000371260 KDM5BQ9UGL1 1544 aa14.12□□□□□ -0.15
SPO11-202ENST00000371260 WDR62O43379 1518 aa14.12□□□□□ -0.15
SPO11-202ENST00000371260 MAGI3Q5TCQ9 1506 aa14.12□□□□□ -0.15
SPO11-202ENST00000371260 KCNH8Q96L42 1107 aa14.11□□□□□ -0.15
SPO11-202ENST00000371260 MRC2Q9UBG0 1479 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms