RNA–Protein interactions for RNA: ENST00000370940.5

HHLA3-203, Transcript of HERV-H LTR-associating 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HHLA3, Length 775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3-203ENST00000370940 CACNB1Q02641 598 aaPredicted RBP14.11□□□□□ -0.15
HHLA3-203ENST00000370940 TDRD9Q8NDG6 1382 aaKnown RBP14.1□□□□□ -0.15
HHLA3-203ENST00000370940 SOGA1O94964 1423 aa14.07□□□□□ -0.16
HHLA3-203ENST00000370940 SNAPC4Q5SXM2 1469 aa14.05□□□□□ -0.16
HHLA3-203ENST00000370940 FGD5Q6ZNL6 1462 aa14.01□□□□□ -0.17
HHLA3-203ENST00000370940 CHMP7Q8WUX9 453 aaPredicted RBP14.01□□□□□ -0.17
HHLA3-203ENST00000370940 CLASP1Q7Z460 1538 aa14□□□□□ -0.17
HHLA3-203ENST00000370940 FKBP8Q14318 412 aa13.99□□□□□ -0.17
HHLA3-203ENST00000370940 CUX1P39880 1505 aa13.97□□□□□ -0.17
HHLA3-203ENST00000370940 MAGI1Q96QZ7 1491 aaPredicted RBP13.95□□□□□ -0.18
HHLA3-203ENST00000370940 SYNJ1O43426 1573 aa13.95□□□□□ -0.18
HHLA3-203ENST00000370940 GRIN2BQ13224 1484 aa13.94□□□□□ -0.18
HHLA3-203ENST00000370940 SYNJ2O15056 1496 aa13.93□□□□□ -0.18
HHLA3-203ENST00000370940 WDR97A6NE52 1622 aa13.92□□□□□ -0.18
HHLA3-203ENST00000370940 GAPVD1Q14C86 1478 aa13.89□□□□□ -0.19
HHLA3-203ENST00000370940 PBRM1Q86U86 1689 aa13.85□□□□□ -0.19
HHLA3-203ENST00000370940 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.19
HHLA3-203ENST00000370940 ABCA10Q8WWZ4 1543 aa13.81□□□□□ -0.2
HHLA3-203ENST00000370940 ABCA5Q8WWZ7 1642 aa13.81□□□□□ -0.2
HHLA3-203ENST00000370940 GRIN2AQ12879 1464 aa13.78□□□□□ -0.2
HHLA3-203ENST00000370940 ATF5Q9Y2D1 282 aaPredicted RBP13.76□□□□□ -0.21
HHLA3-203ENST00000370940 CEP170Q5SW79 1584 aa13.75□□□□□ -0.21
HHLA3-203ENST00000370940 NUP160Q12769 1436 aa13.73□□□□□ -0.21
HHLA3-203ENST00000370940 ADAMTS12P58397 1594 aa13.72□□□□□ -0.21
HHLA3-203ENST00000370940 WRNQ14191 1432 aaPredicted RBP eCLIP13.72□□□□□ -0.21
HHLA3-203ENST00000370940 SUPT5HO00267 1087 aaKnown RBP13.71□□□□□ -0.21
HHLA3-203ENST00000370940 FHAD1B1AJZ9 1412 aa13.68□□□□□ -0.22
HHLA3-203ENST00000370940 SHROOM2Q13796 1616 aa13.68□□□□□ -0.22
HHLA3-203ENST00000370940 PRG4Q92954 1404 aaPredicted RBP13.64□□□□□ -0.23
HHLA3-203ENST00000370940 TOP2BQ02880 1626 aa13.64□□□□□ -0.23
HHLA3-203ENST00000370940 BIVM-ERCC5R4GMW8 1640 aa13.63□□□□□ -0.23
HHLA3-203ENST00000370940 KIF13AQ9H1H9 1805 aa13.62□□□□□ -0.23
HHLA3-203ENST00000370940 JPH4Q96JJ6 628 aa13.62□□□□□ -0.23
HHLA3-203ENST00000370940 ERICH3Q5RHP9 1530 aa13.61□□□□□ -0.23
HHLA3-203ENST00000370940 FAM69CQ0P6D2 419 aa13.59□□□□□ -0.23
HHLA3-203ENST00000370940 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.24
HHLA3-203ENST00000370940 SAMD1Q6SPF0 538 aaPredicted RBP13.57□□□□□ -0.24
HHLA3-203ENST00000370940 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.56□□□□□ -0.24
HHLA3-203ENST00000370940 HNRNPUL2Q1KMD3 747 aaKnown RBP13.56□□□□□ -0.24
HHLA3-203ENST00000370940 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
HHLA3-203ENST00000370940 ABCC10Q5T3U5 1492 aa13.55□□□□□ -0.24
HHLA3-203ENST00000370940 DCAF8L1A6NGE4 600 aa13.55□□□□□ -0.24
HHLA3-203ENST00000370940 RUSC2Q8N2Y8 1516 aa13.54□□□□□ -0.24
HHLA3-203ENST00000370940 NPM1P06748 294 aaKnown RBP eCLIP13.53□□□□□ -0.24
HHLA3-203ENST00000370940 ADCY10Q96PN6 1610 aa13.51□□□□□ -0.25
HHLA3-203ENST00000370940 DIP2BQ9P265 1576 aa13.5□□□□□ -0.25
HHLA3-203ENST00000370940 MAPKBP1O60336 1514 aa13.5□□□□□ -0.25
HHLA3-203ENST00000370940 KDM4FA0A1W2PPD8 638 aa13.49□□□□□ -0.25
HHLA3-203ENST00000370940 IGF1RP08069 1367 aa13.45□□□□□ -0.26
HHLA3-203ENST00000370940 KIAA0586Q9BVV6 1533 aa13.44□□□□□ -0.26
HHLA3-203ENST00000370940 TTBK1Q5TCY1 1321 aaPredicted RBP13.44□□□□□ -0.26
HHLA3-203ENST00000370940 KDM6BO15054 1643 aa13.44□□□□□ -0.26
HHLA3-203ENST00000370940 TSPOAP1O95153 1857 aa13.42□□□□□ -0.26
HHLA3-203ENST00000370940 PTPRGP23470 1445 aa13.39□□□□□ -0.27
HHLA3-203ENST00000370940 KIF27Q86VH2 1401 aa13.38□□□□□ -0.27
HHLA3-203ENST00000370940 RNF39Q9H2S5 420 aa13.37□□□□□ -0.27
HHLA3-203ENST00000370940 ZNF219Q9P2Y4 722 aaPredicted RBP13.37□□□□□ -0.27
HHLA3-203ENST00000370940 CUL7Q14999 1698 aa13.35□□□□□ -0.27
HHLA3-203ENST00000370940 ABCC2Q92887 1545 aa13.34□□□□□ -0.27
HHLA3-203ENST00000370940 CARMIL1Q5VZK9 1371 aa13.33□□□□□ -0.27
HHLA3-203ENST00000370940 TNIKQ9UKE5 1360 aa13.33□□□□□ -0.27
HHLA3-203ENST00000370940 ASXL2Q76L83 1435 aa13.33□□□□□ -0.28
HHLA3-203ENST00000370940 ILDR1Q86SU0 546 aaPredicted RBP13.33□□□□□ -0.28
HHLA3-203ENST00000370940 PPRC1Q5VV67 1664 aaKnown RBP13.31□□□□□ -0.28
HHLA3-203ENST00000370940 CARMIL2Q6F5E8 1435 aa13.3□□□□□ -0.28
HHLA3-203ENST00000370940 COL17A1Q9UMD9 1497 aaPredicted RBP13.29□□□□□ -0.28
HHLA3-203ENST00000370940 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
HHLA3-203ENST00000370940 PLB1Q6P1J6 1458 aa13.29□□□□□ -0.28
HHLA3-203ENST00000370940 GLI2P10070 1586 aa13.28□□□□□ -0.28
HHLA3-203ENST00000370940 UACAQ9BZF9 1416 aa13.27□□□□□ -0.29
HHLA3-203ENST00000370940 UHRF1BP1LA0JNW5 1464 aa13.27□□□□□ -0.29
HHLA3-203ENST00000370940 DISP1Q96F81 1524 aa13.27□□□□□ -0.29
HHLA3-203ENST00000370940 IQGAP2Q13576 1575 aa13.27□□□□□ -0.29
HHLA3-203ENST00000370940 EPRSP07814 1512 aaKnown RBP13.24□□□□□ -0.29
HHLA3-203ENST00000370940 PROM2Q8N271 834 aa13.24□□□□□ -0.29
HHLA3-203ENST00000370940 FBXO3Q9UK99 471 aa13.24□□□□□ -0.29
HHLA3-203ENST00000370940 MKRN4PQ13434 485 aaPredicted RBP13.22□□□□□ -0.29
HHLA3-203ENST00000370940 KDM5BQ9UGL1 1544 aa13.22□□□□□ -0.29
HHLA3-203ENST00000370940 MAP3K4Q9Y6R4 1608 aa13.21□□□□□ -0.29
HHLA3-203ENST00000370940 SPDYE4A6NLX3 237 aa13.21□□□□□ -0.29
HHLA3-203ENST00000370940 APLP2Q06481 763 aa13.19□□□□□ -0.3
HHLA3-203ENST00000370940 ZCCHC11Q5TAX3 1644 aaKnown RBP13.19□□□□□ -0.3
HHLA3-203ENST00000370940 UGGT2Q9NYU1 1516 aa13.18□□□□□ -0.3
HHLA3-203ENST00000370940 TEX14Q8IWB6 1497 aa13.17□□□□□ -0.3
HHLA3-203ENST00000370940 HECW2Q9P2P5 1572 aa13.17□□□□□ -0.3
HHLA3-203ENST00000370940 KIAA0556O60303 1618 aa13.17□□□□□ -0.3
HHLA3-203ENST00000370940 RAPGEF2Q9Y4G8 1499 aa13.16□□□□□ -0.3
HHLA3-203ENST00000370940 POTEHQ6S545 545 aa13.16□□□□□ -0.3
HHLA3-203ENST00000370940 WDR7Q9Y4E6 1490 aa13.15□□□□□ -0.3
HHLA3-203ENST00000370940 KCNH8Q96L42 1107 aa13.13□□□□□ -0.31
HHLA3-203ENST00000370940 CD109Q6YHK3 1445 aa13.11□□□□□ -0.31
HHLA3-203ENST00000370940 VASPP50552 380 aaPredicted RBP13.09□□□□□ -0.31
HHLA3-203ENST00000370940 PLCB2Q00722 1185 aa13.09□□□□□ -0.31
HHLA3-203ENST00000370940 MAGI3Q5TCQ9 1506 aa13.08□□□□□ -0.32
HHLA3-203ENST00000370940 ARID3CA6NKF2 412 aa13.07□□□□□ -0.32
HHLA3-203ENST00000370940 ABCA8O94911 1581 aa13.07□□□□□ -0.32
HHLA3-203ENST00000370940 KIF21BO75037 1637 aa13.04□□□□□ -0.32
HHLA3-203ENST00000370940 C1QBPQ07021 282 aaKnown RBP13.04□□□□□ -0.32
HHLA3-203ENST00000370940 CFAP43Q8NDM7 1665 aa13.04□□□□□ -0.32
HHLA3-203ENST00000370940 CTTNBP2Q8WZ74 1663 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms