RNA–Protein interactions for RNA: ENST00000370085.3

SSR4-202, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2 BASIC

Gene SSR4, Length 526 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-202ENST00000370085 RIMBP3CA6NJZ7 1639 aa22.69■■□□□ 1.22
SSR4-202ENST00000370085 RIMBP3BA6NNM3 1639 aa22.69■■□□□ 1.22
SSR4-202ENST00000370085 RIMBP3Q9UFD9 1639 aa22.69■■□□□ 1.22
SSR4-202ENST00000370085 JPH4Q96JJ6 628 aa22.66■■□□□ 1.22
SSR4-202ENST00000370085 SHROOM2Q13796 1616 aa22.66■■□□□ 1.22
SSR4-202ENST00000370085 IQGAP2Q13576 1575 aa22.64■■□□□ 1.22
SSR4-202ENST00000370085 KIF21BO75037 1637 aa22.64■■□□□ 1.21
SSR4-202ENST00000370085 CTTNBP2Q8WZ74 1663 aa22.63■■□□□ 1.21
SSR4-202ENST00000370085 PRG4Q92954 1404 aaPredicted RBP22.6■■□□□ 1.21
SSR4-202ENST00000370085 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
SSR4-202ENST00000370085 GOLGA3Q08378 1498 aa22.54■■□□□ 1.2
SSR4-202ENST00000370085 CYB5RLQ6IPT4 315 aa22.52■■□□□ 1.2
SSR4-202ENST00000370085 ARAP1Q96P48 1450 aa22.52■■□□□ 1.2
SSR4-202ENST00000370085 UBTFP17480 764 aaKnown RBP22.5■■□□□ 1.19
SSR4-202ENST00000370085 UGGT2Q9NYU1 1516 aa22.5■■□□□ 1.19
SSR4-202ENST00000370085 ERCC6L2Q5T890 1561 aa22.49■■□□□ 1.19
SSR4-202ENST00000370085 EHMT2Q96KQ7 1210 aa22.44■■□□□ 1.18
SSR4-202ENST00000370085 TNIKQ9UKE5 1360 aa22.41■■□□□ 1.18
SSR4-202ENST00000370085 DISP1Q96F81 1524 aa22.4■■□□□ 1.18
SSR4-202ENST00000370085 KIAA0556O60303 1618 aa22.39■■□□□ 1.18
SSR4-202ENST00000370085 PTPRGP23470 1445 aa22.38■■□□□ 1.17
SSR4-202ENST00000370085 TTBK1Q5TCY1 1321 aaPredicted RBP22.33■■□□□ 1.17
SSR4-202ENST00000370085 RANGAP1P46060 587 aaPredicted RBP22.32■■□□□ 1.16
SSR4-202ENST00000370085 EFCAB5A4FU69 1503 aa22.31■■□□□ 1.16
SSR4-202ENST00000370085 SAMD9Q5K651 1589 aa22.3■■□□□ 1.16
SSR4-202ENST00000370085 NPM1P06748 294 aaKnown RBP eCLIP22.26■■□□□ 1.15
SSR4-202ENST00000370085 P3H3Q8IVL6 736 aa22.25■■□□□ 1.15
SSR4-202ENST00000370085 UACAQ9BZF9 1416 aa22.23■■□□□ 1.15
SSR4-202ENST00000370085 ADCY10Q96PN6 1610 aa22.2■■□□□ 1.14
SSR4-202ENST00000370085 UHRF1BP1LA0JNW5 1464 aa22.19■■□□□ 1.14
SSR4-202ENST00000370085 ABCC2Q92887 1545 aa22.17■■□□□ 1.14
SSR4-202ENST00000370085 FHOD3Q2V2M9 1422 aa22.17■■□□□ 1.14
SSR4-202ENST00000370085 ARHGAP35Q9NRY4 1499 aa22.14■■□□□ 1.13
SSR4-202ENST00000370085 PLB1Q6P1J6 1458 aa22.13■■□□□ 1.13
SSR4-202ENST00000370085 CLIP1P30622 1438 aa22.13■■□□□ 1.13
SSR4-202ENST00000370085 LOC105371045A0A1W2PR82 267 aa22.12■■□□□ 1.13
SSR4-202ENST00000370085 FMN1Q68DA7 1419 aa22.12■■□□□ 1.13
SSR4-202ENST00000370085 ABCA8O94911 1581 aa22.12■■□□□ 1.13
SSR4-202ENST00000370085 RAPGEF6Q8TEU7 1601 aa22.08■■□□□ 1.13
SSR4-202ENST00000370085 MAPKBP1O60336 1514 aa22.06■■□□□ 1.12
SSR4-202ENST00000370085 KDM5BQ9UGL1 1544 aa22.06■■□□□ 1.12
SSR4-202ENST00000370085 CEP162Q5TB80 1403 aa22.06■■□□□ 1.12
SSR4-202ENST00000370085 TRHP20396 242 aaPredicted RBP22.05■■□□□ 1.12
SSR4-202ENST00000370085 ZCCHC11Q5TAX3 1644 aaKnown RBP22.02■■□□□ 1.12
SSR4-202ENST00000370085 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.97■■□□□ 1.11
SSR4-202ENST00000370085 HNRNPUL2Q1KMD3 747 aaKnown RBP21.97■■□□□ 1.11
SSR4-202ENST00000370085 ATP1B4Q9UN42 357 aaPredicted RBP21.97■■□□□ 1.11
SSR4-202ENST00000370085 HECW1Q76N89 1606 aa21.97■■□□□ 1.11
SSR4-202ENST00000370085 ASXL2Q76L83 1435 aa21.97■■□□□ 1.11
SSR4-202ENST00000370085 NUP153P49790 1475 aaKnown RBP21.96■■□□□ 1.11
SSR4-202ENST00000370085 ATP10BO94823 1461 aa21.94■■□□□ 1.1
SSR4-202ENST00000370085 ARID3CA6NKF2 412 aa21.93■■□□□ 1.1
SSR4-202ENST00000370085 ABCC10Q5T3U5 1492 aa21.92■■□□□ 1.1
SSR4-202ENST00000370085 WDR7Q9Y4E6 1490 aa21.91■■□□□ 1.1
SSR4-202ENST00000370085 CASKIN1Q8WXD9 1431 aa21.91■■□□□ 1.1
SSR4-202ENST00000370085 FYCO1Q9BQS8 1478 aa21.9■■□□□ 1.1
SSR4-202ENST00000370085 FAM69CQ0P6D2 419 aa21.89■■□□□ 1.09
SSR4-202ENST00000370085 DIP2BQ9P265 1576 aa21.88■■□□□ 1.09
SSR4-202ENST00000370085 CDK11AQ9UQ88 783 aaPredicted RBP21.88■■□□□ 1.09
SSR4-202ENST00000370085 PCF11O94913 1555 aaKnown RBP21.87■■□□□ 1.09
SSR4-202ENST00000370085 PLEKHD1A6NEE1 506 aa21.87■■□□□ 1.09
SSR4-202ENST00000370085 KIF13AQ9H1H9 1805 aa21.87■■□□□ 1.09
SSR4-202ENST00000370085 CCDC18Q5T9S5 1454 aa21.86■■□□□ 1.09
SSR4-202ENST00000370085 EPRSP07814 1512 aaKnown RBP21.85■■□□□ 1.09
SSR4-202ENST00000370085 CDK13Q14004 1512 aaKnown RBP21.82■■□□□ 1.08
SSR4-202ENST00000370085 KCNH8Q96L42 1107 aa21.82■■□□□ 1.08
SSR4-202ENST00000370085 GLI2P10070 1586 aa21.82■■□□□ 1.08
SSR4-202ENST00000370085 VPS8Q8N3P4 1428 aa21.8■■□□□ 1.08
SSR4-202ENST00000370085 LRRIQ1Q96JM4 1722 aa21.75■■□□□ 1.07
SSR4-202ENST00000370085 CFAP43Q8NDM7 1665 aa21.74■■□□□ 1.07
SSR4-202ENST00000370085 TSPOAP1O95153 1857 aa21.72■■□□□ 1.07
SSR4-202ENST00000370085 MAP3K4Q9Y6R4 1608 aa21.71■■□□□ 1.07
SSR4-202ENST00000370085 TROQ12816 1431 aaPredicted RBP21.7■■□□□ 1.06
SSR4-202ENST00000370085 CD109Q6YHK3 1445 aa21.7■■□□□ 1.06
SSR4-202ENST00000370085 TEX14Q8IWB6 1497 aa21.69■■□□□ 1.06
SSR4-202ENST00000370085 ABCA9Q8IUA7 1624 aa21.69■■□□□ 1.06
SSR4-202ENST00000370085 APLP2Q06481 763 aa21.68■■□□□ 1.06
SSR4-202ENST00000370085 KIF14Q15058 1648 aa21.67■■□□□ 1.06
SSR4-202ENST00000370085 MTUS2Q5JR59 1369 aa21.65■■□□□ 1.06
SSR4-202ENST00000370085 MAGI3Q5TCQ9 1506 aa21.63■■□□□ 1.05
SSR4-202ENST00000370085 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.61■■□□□ 1.054e-9■□□□□ 10.3
SSR4-202ENST00000370085 TIAM1Q13009 1591 aa21.61■■□□□ 1.05
SSR4-202ENST00000370085 MAP3K1Q13233 1512 aa21.6■■□□□ 1.05
SSR4-202ENST00000370085 PPRC1Q5VV67 1664 aaKnown RBP21.6■■□□□ 1.05
SSR4-202ENST00000370085 EHBP1L1Q8N3D4 1523 aa21.59■■□□□ 1.05
SSR4-202ENST00000370085 TTC37Q6PGP7 1564 aa21.57■■□□□ 1.04
SSR4-202ENST00000370085 PHLDB1Q86UU1 1377 aa21.56■■□□□ 1.04
SSR4-202ENST00000370085 MYO5CQ9NQX4 1742 aa21.55■■□□□ 1.04
SSR4-202ENST00000370085 CFAP74Q9C0B2 1584 aa21.55■■□□□ 1.04
SSR4-202ENST00000370085 NEO1Q92859 1461 aa21.52■■□□□ 1.04
SSR4-202ENST00000370085 KDM6BO15054 1643 aa21.52■■□□□ 1.04
SSR4-202ENST00000370085 PLCH2O75038 1416 aa21.52■■□□□ 1.04
SSR4-202ENST00000370085 ARAP3Q8WWN8 1544 aa21.51■■□□□ 1.03
SSR4-202ENST00000370085 SUPT6HQ7KZ85 1726 aaKnown RBP21.51■■□□□ 1.03
SSR4-202ENST00000370085 LRRC9Q6ZRR7 1453 aa21.51■■□□□ 1.03
SSR4-202ENST00000370085 FANCAO15360 1455 aa21.5■■□□□ 1.03
SSR4-202ENST00000370085 EFCAB2Q5VUJ9 269 aa21.49■■□□□ 1.03
SSR4-202ENST00000370085 CCNB3Q8WWL7 1395 aa21.48■■□□□ 1.03
SSR4-202ENST00000370085 ARHGAP5Q13017 1502 aa21.47■■□□□ 1.03
SSR4-202ENST00000370085 PREX2Q70Z35 1606 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms