RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 GOLGA3Q08378 1498 aa25.49■■□□□ 1.67
PRPF38B-202ENST00000370022 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
PRPF38B-202ENST00000370022 IQGAP2Q13576 1575 aa25.47■■□□□ 1.67
PRPF38B-202ENST00000370022 JPH4Q96JJ6 628 aa25.46■■□□□ 1.67
PRPF38B-202ENST00000370022 CTTNBP2Q8WZ74 1663 aa25.46■■□□□ 1.67
PRPF38B-202ENST00000370022 ARHGEF11O15085 1522 aa25.42■■□□□ 1.66
PRPF38B-202ENST00000370022 PRG4Q92954 1404 aaPredicted RBP25.37■■□□□ 1.65
PRPF38B-202ENST00000370022 UBTFP17480 764 aaKnown RBP25.37■■□□□ 1.65
PRPF38B-202ENST00000370022 RIMBP3CA6NJZ7 1639 aa25.36■■□□□ 1.65
PRPF38B-202ENST00000370022 RIMBP3BA6NNM3 1639 aa25.36■■□□□ 1.65
PRPF38B-202ENST00000370022 RIMBP3Q9UFD9 1639 aa25.36■■□□□ 1.65
PRPF38B-202ENST00000370022 UGGT2Q9NYU1 1516 aa25.35■■□□□ 1.65
PRPF38B-202ENST00000370022 EHMT2Q96KQ7 1210 aa25.33■■□□□ 1.65
PRPF38B-202ENST00000370022 CARMIL2Q6F5E8 1435 aa25.31■■□□□ 1.64
PRPF38B-202ENST00000370022 ERCC6L2Q5T890 1561 aa25.28■■□□□ 1.64
PRPF38B-202ENST00000370022 DISP1Q96F81 1524 aa25.25■■□□□ 1.63
PRPF38B-202ENST00000370022 TNIKQ9UKE5 1360 aa25.24■■□□□ 1.63
PRPF38B-202ENST00000370022 ARAP1Q96P48 1450 aa25.23■■□□□ 1.63
PRPF38B-202ENST00000370022 KIAA0556O60303 1618 aa25.22■■□□□ 1.63
PRPF38B-202ENST00000370022 SAMD9Q5K651 1589 aa25.17■■□□□ 1.62
PRPF38B-202ENST00000370022 EFCAB5A4FU69 1503 aa25.16■■□□□ 1.62
PRPF38B-202ENST00000370022 CYB5RLQ6IPT4 315 aa25.15■■□□□ 1.62
PRPF38B-202ENST00000370022 PTPRGP23470 1445 aa25.13■■□□□ 1.61
PRPF38B-202ENST00000370022 LOC105371045A0A1W2PR82 267 aa25.13■■□□□ 1.61
PRPF38B-202ENST00000370022 RANGAP1P46060 587 aaPredicted RBP25.13■■□□□ 1.61
PRPF38B-202ENST00000370022 P3H3Q8IVL6 736 aa25.05■■□□□ 1.6
PRPF38B-202ENST00000370022 ARHGAP35Q9NRY4 1499 aa25.04■■□□□ 1.6
PRPF38B-202ENST00000370022 CLIP1P30622 1438 aa25.02■■□□□ 1.6
PRPF38B-202ENST00000370022 TTBK1Q5TCY1 1321 aaPredicted RBP25.01■■□□□ 1.59
PRPF38B-202ENST00000370022 FHOD3Q2V2M9 1422 aa25.01■■□□□ 1.59
PRPF38B-202ENST00000370022 CEP162Q5TB80 1403 aa25■■□□□ 1.59
PRPF38B-202ENST00000370022 UACAQ9BZF9 1416 aa24.98■■□□□ 1.59
PRPF38B-202ENST00000370022 UHRF1BP1LA0JNW5 1464 aa24.95■■□□□ 1.59
PRPF38B-202ENST00000370022 FMN1Q68DA7 1419 aa24.94■■□□□ 1.58
PRPF38B-202ENST00000370022 ABCC2Q92887 1545 aa24.93■■□□□ 1.58
PRPF38B-202ENST00000370022 ABCA8O94911 1581 aa24.92■■□□□ 1.58
PRPF38B-202ENST00000370022 PLB1Q6P1J6 1458 aa24.92■■□□□ 1.58
PRPF38B-202ENST00000370022 ADCY10Q96PN6 1610 aa24.92■■□□□ 1.58
PRPF38B-202ENST00000370022 NPM1P06748 294 aaKnown RBP eCLIP24.86■■□□□ 1.57
PRPF38B-202ENST00000370022 RAPGEF6Q8TEU7 1601 aa24.85■■□□□ 1.57
PRPF38B-202ENST00000370022 KDM5BQ9UGL1 1544 aa24.82■■□□□ 1.56
PRPF38B-202ENST00000370022 NUP153P49790 1475 aaKnown RBP24.76■■□□□ 1.55
PRPF38B-202ENST00000370022 CASKIN1Q8WXD9 1431 aa24.76■■□□□ 1.55
PRPF38B-202ENST00000370022 MAPKBP1O60336 1514 aa24.75■■□□□ 1.55
PRPF38B-202ENST00000370022 HECW1Q76N89 1606 aa24.75■■□□□ 1.55
PRPF38B-202ENST00000370022 ZCCHC11Q5TAX3 1644 aaKnown RBP24.73■■□□□ 1.55
PRPF38B-202ENST00000370022 FYCO1Q9BQS8 1478 aa24.72■■□□□ 1.55
PRPF38B-202ENST00000370022 ATP10BO94823 1461 aa24.72■■□□□ 1.55
PRPF38B-202ENST00000370022 PCF11O94913 1555 aaKnown RBP24.71■■□□□ 1.55
PRPF38B-202ENST00000370022 VPS8Q8N3P4 1428 aa24.69■■□□□ 1.54
PRPF38B-202ENST00000370022 ATP1B4Q9UN42 357 aaPredicted RBP24.68■■□□□ 1.54
PRPF38B-202ENST00000370022 EPRSP07814 1512 aaKnown RBP24.66■■□□□ 1.54
PRPF38B-202ENST00000370022 ASXL2Q76L83 1435 aa24.66■■□□□ 1.54
PRPF38B-202ENST00000370022 ARID3CA6NKF2 412 aa24.65■■□□□ 1.54
PRPF38B-202ENST00000370022 CCDC18Q5T9S5 1454 aa24.65■■□□□ 1.54
PRPF38B-202ENST00000370022 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.64■■□□□ 1.54
PRPF38B-202ENST00000370022 HNRNPUL2Q1KMD3 747 aaKnown RBP24.64■■□□□ 1.54
PRPF38B-202ENST00000370022 TRHP20396 242 aaPredicted RBP24.63■■□□□ 1.53
PRPF38B-202ENST00000370022 WDR7Q9Y4E6 1490 aa24.6■■□□□ 1.53
PRPF38B-202ENST00000370022 CDK13Q14004 1512 aaKnown RBP24.6■■□□□ 1.53
PRPF38B-202ENST00000370022 CDK11AQ9UQ88 783 aaPredicted RBP24.59■■□□□ 1.53
PRPF38B-202ENST00000370022 ABCC10Q5T3U5 1492 aa24.58■■□□□ 1.52
PRPF38B-202ENST00000370022 PLEKHD1A6NEE1 506 aa24.57■■□□□ 1.52
PRPF38B-202ENST00000370022 LRRIQ1Q96JM4 1722 aa24.56■■□□□ 1.52
PRPF38B-202ENST00000370022 DIP2BQ9P265 1576 aa24.52■■□□□ 1.52
PRPF38B-202ENST00000370022 GLI2P10070 1586 aa24.49■■□□□ 1.51
PRPF38B-202ENST00000370022 FAM69CQ0P6D2 419 aa24.49■■□□□ 1.51
PRPF38B-202ENST00000370022 MAP3K1Q13233 1512 aa24.47■■□□□ 1.51
PRPF38B-202ENST00000370022 KCNH8Q96L42 1107 aa24.46■■□□□ 1.51
PRPF38B-202ENST00000370022 TROQ12816 1431 aaPredicted RBP24.46■■□□□ 1.51
PRPF38B-202ENST00000370022 KIF13AQ9H1H9 1805 aa24.44■■□□□ 1.5
PRPF38B-202ENST00000370022 CFAP43Q8NDM7 1665 aa24.44■■□□□ 1.5
PRPF38B-202ENST00000370022 TIAM1Q13009 1591 aa24.44■■□□□ 1.5
PRPF38B-202ENST00000370022 APLP2Q06481 763 aa24.43■■□□□ 1.5
PRPF38B-202ENST00000370022 MAGI3Q5TCQ9 1506 aa24.4■■□□□ 1.5
PRPF38B-202ENST00000370022 MTUS2Q5JR59 1369 aa24.4■■□□□ 1.5
PRPF38B-202ENST00000370022 KIF14Q15058 1648 aa24.38■■□□□ 1.49
PRPF38B-202ENST00000370022 ABCA9Q8IUA7 1624 aa24.38■■□□□ 1.49
PRPF38B-202ENST00000370022 EHBP1L1Q8N3D4 1523 aa24.37■■□□□ 1.49
PRPF38B-202ENST00000370022 MAP3K4Q9Y6R4 1608 aa24.36■■□□□ 1.49
PRPF38B-202ENST00000370022 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.34■■□□□ 1.49
PRPF38B-202ENST00000370022 LRRC9Q6ZRR7 1453 aa24.34■■□□□ 1.49
PRPF38B-202ENST00000370022 CD109Q6YHK3 1445 aa24.34■■□□□ 1.49
PRPF38B-202ENST00000370022 TTC37Q6PGP7 1564 aa24.29■■□□□ 1.48
PRPF38B-202ENST00000370022 TEX14Q8IWB6 1497 aa24.27■■□□□ 1.48
PRPF38B-202ENST00000370022 KANK4Q5T7N3 995 aaPredicted RBP24.26■■□□□ 1.47
PRPF38B-202ENST00000370022 SUPT6HQ7KZ85 1726 aaKnown RBP24.24■■□□□ 1.47
PRPF38B-202ENST00000370022 PPRC1Q5VV67 1664 aaKnown RBP24.23■■□□□ 1.47
PRPF38B-202ENST00000370022 PLCH2O75038 1416 aa24.23■■□□□ 1.47
PRPF38B-202ENST00000370022 TSPOAP1O95153 1857 aa24.23■■□□□ 1.47
PRPF38B-202ENST00000370022 ARAP3Q8WWN8 1544 aa24.22■■□□□ 1.47
PRPF38B-202ENST00000370022 MYO5CQ9NQX4 1742 aa24.21■■□□□ 1.47
PRPF38B-202ENST00000370022 NCOA2Q15596 1464 aa24.2■■□□□ 1.47
PRPF38B-202ENST00000370022 CCNB3Q8WWL7 1395 aa24.19■■□□□ 1.46
PRPF38B-202ENST00000370022 PHLDB1Q86UU1 1377 aa24.18■■□□□ 1.46
PRPF38B-202ENST00000370022 NEO1Q92859 1461 aa24.17■■□□□ 1.46
PRPF38B-202ENST00000370022 GPATCH8Q9UKJ3 1502 aaKnown RBP24.16■■□□□ 1.46
PRPF38B-202ENST00000370022 FANCAO15360 1455 aa24.16■■□□□ 1.46
PRPF38B-202ENST00000370022 CFAP74Q9C0B2 1584 aa24.16■■□□□ 1.46
PRPF38B-202ENST00000370022 PREX2Q70Z35 1606 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms