RNA–Protein interactions for RNA: ENST00000369705.3

ME1-201, Transcript of malic enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME1, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME1-201ENST00000369705 IFT140Q96RY7 1462 aa16.16■□□□□ 0.18
ME1-201ENST00000369705 ATP1B4Q9UN42 357 aaPredicted RBP16.16■□□□□ 0.18
ME1-201ENST00000369705 WDR97A6NE52 1622 aa16.13■□□□□ 0.17
ME1-201ENST00000369705 VPS8Q8N3P4 1428 aa16.13■□□□□ 0.17
ME1-201ENST00000369705 ABCA5Q8WWZ7 1642 aa16.13■□□□□ 0.17
ME1-201ENST00000369705 THOC2Q8NI27 1593 aaKnown RBP16.1■□□□□ 0.17
ME1-201ENST00000369705 ARAP1Q96P48 1450 aa16.1■□□□□ 0.17
ME1-201ENST00000369705 GRIN2BQ13224 1484 aa16.09■□□□□ 0.17
ME1-201ENST00000369705 CUL7Q14999 1698 aa16.09■□□□□ 0.17
ME1-201ENST00000369705 ARHGAP35Q9NRY4 1499 aa16.08■□□□□ 0.17
ME1-201ENST00000369705 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
ME1-201ENST00000369705 PRKCSHP14314 528 aaPredicted RBP16.06■□□□□ 0.16
ME1-201ENST00000369705 FHAD1B1AJZ9 1412 aa16.05■□□□□ 0.16
ME1-201ENST00000369705 SNAPC4Q5SXM2 1469 aa16.02■□□□□ 0.16
ME1-201ENST00000369705 FHOD3Q2V2M9 1422 aa16.01■□□□□ 0.15
ME1-201ENST00000369705 PBRM1Q86U86 1689 aa16.01■□□□□ 0.15
ME1-201ENST00000369705 EIF4G3O43432 1585 aaKnown RBP16■□□□□ 0.15
ME1-201ENST00000369705 KANK4Q5T7N3 995 aaPredicted RBP16■□□□□ 0.15
ME1-201ENST00000369705 ZEB1P37275 1124 aaPredicted RBP15.98■□□□□ 0.15
ME1-201ENST00000369705 ADAMTS12P58397 1594 aa15.95■□□□□ 0.14
ME1-201ENST00000369705 CENPBP07199 599 aaPredicted RBP15.95■□□□□ 0.14
ME1-201ENST00000369705 HNRNPUL2Q1KMD3 747 aaKnown RBP15.92■□□□□ 0.14
ME1-201ENST00000369705 ARID3CA6NKF2 412 aa15.92■□□□□ 0.14
ME1-201ENST00000369705 CTTNBP2Q8WZ74 1663 aa15.91■□□□□ 0.14
ME1-201ENST00000369705 GRIN2AQ12879 1464 aa15.89■□□□□ 0.13
ME1-201ENST00000369705 MAGI1Q96QZ7 1491 aaPredicted RBP15.89■□□□□ 0.13
ME1-201ENST00000369705 SYNJ2O15056 1496 aa15.87■□□□□ 0.13
ME1-201ENST00000369705 EFCAB5A4FU69 1503 aa15.86■□□□□ 0.13
ME1-201ENST00000369705 FMN1Q68DA7 1419 aa15.85■□□□□ 0.13
ME1-201ENST00000369705 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.85■□□□□ 0.13
ME1-201ENST00000369705 IQGAP2Q13576 1575 aa15.85■□□□□ 0.13
ME1-201ENST00000369705 JPH4Q96JJ6 628 aa15.83■□□□□ 0.13
ME1-201ENST00000369705 ITGAEP38570 1179 aa15.83■□□□□ 0.12
ME1-201ENST00000369705 KIAA0586Q9BVV6 1533 aa15.82■□□□□ 0.12
ME1-201ENST00000369705 PCF11O94913 1555 aaKnown RBP15.8■□□□□ 0.12
ME1-201ENST00000369705 CCER1Q8TC90 406 aaPredicted RBP15.79■□□□□ 0.12
ME1-201ENST00000369705 CASKIN1Q8WXD9 1431 aa15.79■□□□□ 0.12
ME1-201ENST00000369705 YTHDC1Q96MU7 727 aaKnown RBP15.76■□□□□ 0.11
ME1-201ENST00000369705 SAMD9Q5K651 1589 aa15.76■□□□□ 0.11
ME1-201ENST00000369705 CEP170Q5SW79 1584 aa15.76■□□□□ 0.11
ME1-201ENST00000369705 FYCO1Q9BQS8 1478 aa15.75■□□□□ 0.11
ME1-201ENST00000369705 TIAM1Q13009 1591 aa15.75■□□□□ 0.11
ME1-201ENST00000369705 MTUS2Q5JR59 1369 aa15.75■□□□□ 0.11
ME1-201ENST00000369705 FAM50AQ14320 339 aaKnown RBP15.74■□□□□ 0.11
ME1-201ENST00000369705 LRRC9Q6ZRR7 1453 aa15.74■□□□□ 0.11
ME1-201ENST00000369705 NUP160Q12769 1436 aa15.72■□□□□ 0.11
ME1-201ENST00000369705 UGGT2Q9NYU1 1516 aa15.72■□□□□ 0.11
ME1-201ENST00000369705 DIEXFQ68CQ4 756 aaKnown RBP15.71■□□□□ 0.11
ME1-201ENST00000369705 DISP1Q96F81 1524 aa15.7■□□□□ 0.1
ME1-201ENST00000369705 CARMIL2Q6F5E8 1435 aa15.7■□□□□ 0.1
ME1-201ENST00000369705 ANP32EQ9BTT0 268 aa15.69■□□□□ 0.1
ME1-201ENST00000369705 PHLDB1Q86UU1 1377 aa15.68■□□□□ 0.1
ME1-201ENST00000369705 CCNB3Q8WWL7 1395 aa15.68■□□□□ 0.1
ME1-201ENST00000369705 MAP3K1Q13233 1512 aa15.67■□□□□ 0.1
ME1-201ENST00000369705 KIAA0556O60303 1618 aa15.66■□□□□ 0.1
ME1-201ENST00000369705 PRG4Q92954 1404 aaPredicted RBP15.65■□□□□ 0.1
ME1-201ENST00000369705 CHD1O14646 1710 aa15.62■□□□□ 0.09
ME1-201ENST00000369705 CDK13Q14004 1512 aaKnown RBP15.62■□□□□ 0.09
ME1-201ENST00000369705 PLB1Q6P1J6 1458 aa15.62■□□□□ 0.09
ME1-201ENST00000369705 CDK11AQ9UQ88 783 aaPredicted RBP15.61■□□□□ 0.09
ME1-201ENST00000369705 RRBP1Q9P2E9 1410 aaKnown RBP15.61■□□□□ 0.09
ME1-201ENST00000369705 EPRSP07814 1512 aaKnown RBP15.61■□□□□ 0.09
ME1-201ENST00000369705 CFAP43Q8NDM7 1665 aa15.6■□□□□ 0.09
ME1-201ENST00000369705 PTPRGP23470 1445 aa15.59■□□□□ 0.09
ME1-201ENST00000369705 HECW1Q76N89 1606 aa15.59■□□□□ 0.09
ME1-201ENST00000369705 CCDC18Q5T9S5 1454 aa15.58■□□□□ 0.08
ME1-201ENST00000369705 NUP153P49790 1475 aaKnown RBP15.55■□□□□ 0.08
ME1-201ENST00000369705 NCOA2Q15596 1464 aa15.55■□□□□ 0.08
ME1-201ENST00000369705 LRRIQ1Q96JM4 1722 aa15.55■□□□□ 0.08
ME1-201ENST00000369705 PLEKHD1A6NEE1 506 aa15.53■□□□□ 0.08
ME1-201ENST00000369705 MAGI3Q5TCQ9 1506 aa15.53■□□□□ 0.08
ME1-201ENST00000369705 RAPGEF6Q8TEU7 1601 aa15.52■□□□□ 0.08
ME1-201ENST00000369705 EHBP1L1Q8N3D4 1523 aa15.5■□□□□ 0.07
ME1-201ENST00000369705 FGD6Q6ZV73 1430 aa15.5■□□□□ 0.07
ME1-201ENST00000369705 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
ME1-201ENST00000369705 ZNF777Q9ULD5 760 aaPredicted RBP15.5■□□□□ 0.07
ME1-201ENST00000369705 CHIC2Q9UKJ5 165 aa15.49■□□□□ 0.07
ME1-201ENST00000369705 MYOM3Q5VTT5 1437 aa15.48■□□□□ 0.07
ME1-201ENST00000369705 ERCC6L2Q5T890 1561 aa15.48■□□□□ 0.07
ME1-201ENST00000369705 SUPT6HQ7KZ85 1726 aaKnown RBP15.47■□□□□ 0.07
ME1-201ENST00000369705 KCNH8Q96L42 1107 aa15.45■□□□□ 0.06
ME1-201ENST00000369705 CFDP1Q9UEE9 299 aaPredicted RBP15.44■□□□□ 0.06
ME1-201ENST00000369705 ZNF644Q9H582 1327 aaPredicted RBP15.44■□□□□ 0.06
ME1-201ENST00000369705 ATP10BO94823 1461 aa15.44■□□□□ 0.06
ME1-201ENST00000369705 UACAQ9BZF9 1416 aa15.43■□□□□ 0.06
ME1-201ENST00000369705 TSHZ2Q9NRE2 1034 aa15.42■□□□□ 0.06
ME1-201ENST00000369705 RAB3GAP2Q9H2M9 1393 aa15.42■□□□□ 0.06
ME1-201ENST00000369705 TROQ12816 1431 aaPredicted RBP15.42■□□□□ 0.06
ME1-201ENST00000369705 RRP7BPQ9NSQ0 103 aa15.42■□□□□ 0.06
ME1-201ENST00000369705 ABCA8O94911 1581 aa15.4■□□□□ 0.06
ME1-201ENST00000369705 SETD5Q9C0A6 1442 aa15.4■□□□□ 0.06
ME1-201ENST00000369705 CLASP1Q7Z460 1538 aa15.39■□□□□ 0.05
ME1-201ENST00000369705 SHROOM2Q13796 1616 aa15.38■□□□□ 0.05
ME1-201ENST00000369705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.37■□□□□ 0.05
ME1-201ENST00000369705 PTPRKQ15262 1439 aa15.37■□□□□ 0.05
ME1-201ENST00000369705 DHX57Q6P158 1386 aaKnown RBP15.36■□□□□ 0.05
ME1-201ENST00000369705 ARHGEF11O15085 1522 aa15.36■□□□□ 0.05
ME1-201ENST00000369705 PTPN23Q9H3S7 1636 aa15.35■□□□□ 0.05
ME1-201ENST00000369705 ERICH6Q7L0X2 663 aa15.34■□□□□ 0.05
ME1-201ENST00000369705 MIA2Q96PC5 1412 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms