RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 FKBP8Q14318 412 aa22.75■■□□□ 1.23
SYNCRIP-202ENST00000369622 KCNH8Q96L42 1107 aa22.75■■□□□ 1.23
SYNCRIP-202ENST00000369622 RAB3GAP2Q9H2M9 1393 aa22.74■■□□□ 1.23
SYNCRIP-202ENST00000369622 SIN3AQ96ST3 1273 aa22.74■■□□□ 1.23
SYNCRIP-202ENST00000369622 CFTRP13569 1480 aa22.72■■□□□ 1.23
SYNCRIP-202ENST00000369622 IGF1RP08069 1367 aa22.72■■□□□ 1.23
SYNCRIP-202ENST00000369622 HIRIP3Q9BW71 556 aaPredicted RBP22.71■■□□□ 1.23
SYNCRIP-202ENST00000369622 CARMIL1Q5VZK9 1371 aa22.69■■□□□ 1.22
SYNCRIP-202ENST00000369622 DDX10Q13206 875 aaKnown RBP22.68■■□□□ 1.22
SYNCRIP-202ENST00000369622 CCDC136Q96JN2 1154 aa22.68■■□□□ 1.22
SYNCRIP-202ENST00000369622 HMGXB3Q12766 1538 aa22.67■■□□□ 1.22
SYNCRIP-202ENST00000369622 PHLDB1Q86UU1 1377 aa22.59■■□□□ 1.21
SYNCRIP-202ENST00000369622 SALL2Q9Y467 1007 aaPredicted RBP22.59■■□□□ 1.21
SYNCRIP-202ENST00000369622 SETD5Q9C0A6 1442 aa22.58■■□□□ 1.2
SYNCRIP-202ENST00000369622 DEKP35659 375 aaKnown RBP22.56■■□□□ 1.2
SYNCRIP-202ENST00000369622 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
SYNCRIP-202ENST00000369622 FGD5Q6ZNL6 1462 aa22.54■■□□□ 1.2
SYNCRIP-202ENST00000369622 LRRC9Q6ZRR7 1453 aa22.51■■□□□ 1.19
SYNCRIP-202ENST00000369622 TIAM1Q13009 1591 aa22.49■■□□□ 1.19
SYNCRIP-202ENST00000369622 FHOD3Q2V2M9 1422 aa22.48■■□□□ 1.19
SYNCRIP-202ENST00000369622 MAPKBP1O60336 1514 aa22.48■■□□□ 1.19
SYNCRIP-202ENST00000369622 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
SYNCRIP-202ENST00000369622 TRIM52Q96A61 297 aa22.44■■□□□ 1.18
SYNCRIP-202ENST00000369622 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.43■■□□□ 1.18
SYNCRIP-202ENST00000369622 RAD54L2Q9Y4B4 1467 aa22.42■■□□□ 1.18
SYNCRIP-202ENST00000369622 RTN4Q9NQC3 1192 aaKnown RBP22.41■■□□□ 1.18
SYNCRIP-202ENST00000369622 WDR97A6NE52 1622 aa22.41■■□□□ 1.18
SYNCRIP-202ENST00000369622 NEFLP07196 543 aa22.39■■□□□ 1.17
SYNCRIP-202ENST00000369622 NBR1Q14596 966 aa22.38■■□□□ 1.17
SYNCRIP-202ENST00000369622 ANP32CO43423 234 aa22.36■■□□□ 1.17
SYNCRIP-202ENST00000369622 PPP1R15AO75807 674 aaPredicted RBP22.36■■□□□ 1.17
SYNCRIP-202ENST00000369622 FANCD2Q9BXW9 1451 aa22.35■■□□□ 1.17
SYNCRIP-202ENST00000369622 PCF11O94913 1555 aaKnown RBP22.33■■□□□ 1.16
SYNCRIP-202ENST00000369622 TONSLQ96HA7 1378 aa22.32■■□□□ 1.16
SYNCRIP-202ENST00000369622 MTUS2Q5JR59 1369 aa22.32■■□□□ 1.16
SYNCRIP-202ENST00000369622 MAP3K1Q13233 1512 aa22.31■■□□□ 1.16
SYNCRIP-202ENST00000369622 ARID3CA6NKF2 412 aa22.28■■□□□ 1.16
SYNCRIP-202ENST00000369622 CHIC2Q9UKJ5 165 aa22.28■■□□□ 1.16
SYNCRIP-202ENST00000369622 IRX6P78412 446 aaPredicted RBP22.26■■□□□ 1.15
SYNCRIP-202ENST00000369622 NESP48681 1621 aa22.24■■□□□ 1.15
SYNCRIP-202ENST00000369622 TDRD9Q8NDG6 1382 aaKnown RBP22.24■■□□□ 1.15
SYNCRIP-202ENST00000369622 TIMELESSQ9UNS1 1208 aa22.24■■□□□ 1.15
SYNCRIP-202ENST00000369622 RRP7BPQ9NSQ0 103 aa22.23■■□□□ 1.15
SYNCRIP-202ENST00000369622 IL27Q8NEV9 243 aa22.21■■□□□ 1.15
SYNCRIP-202ENST00000369622 POLA1P09884 1462 aaPredicted RBP22.21■■□□□ 1.15
SYNCRIP-202ENST00000369622 CASKIN1Q8WXD9 1431 aa22.2■■□□□ 1.14
SYNCRIP-202ENST00000369622 FGD6Q6ZV73 1430 aa22.18■■□□□ 1.14
SYNCRIP-202ENST00000369622 CC2D2AQ9P2K1 1620 aa22.18■■□□□ 1.14
SYNCRIP-202ENST00000369622 PRDM2Q13029 1718 aa22.18■■□□□ 1.14
SYNCRIP-202ENST00000369622 FYCO1Q9BQS8 1478 aa22.17■■□□□ 1.14
SYNCRIP-202ENST00000369622 TOPBP1Q92547 1522 aa22.16■■□□□ 1.14
SYNCRIP-202ENST00000369622 FMN1Q68DA7 1419 aa22.15■■□□□ 1.14
SYNCRIP-202ENST00000369622 CCDC18Q5T9S5 1454 aa22.14■■□□□ 1.14
SYNCRIP-202ENST00000369622 FANCIQ9NVI1 1328 aa22.14■■□□□ 1.13
SYNCRIP-202ENST00000369622 PTPRKQ15262 1439 aa22.13■■□□□ 1.13
SYNCRIP-202ENST00000369622 CCER2I3L3R5 266 aa22.13■■□□□ 1.13
SYNCRIP-202ENST00000369622 CFAP43Q8NDM7 1665 aa22.12■■□□□ 1.13
SYNCRIP-202ENST00000369622 CDK11AQ9UQ88 783 aaPredicted RBP22.12■■□□□ 1.13
SYNCRIP-202ENST00000369622 ABCA10Q8WWZ4 1543 aa22.12■■□□□ 1.13
SYNCRIP-202ENST00000369622 HNRNPUQ00839 825 aaKnown RBP eCLIP22.11■■□□□ 1.135e-7■□□□□ 11.1
SYNCRIP-202ENST00000369622 DNMBPQ6XZF7 1577 aa22.09■■□□□ 1.13
SYNCRIP-202ENST00000369622 EFCAB5A4FU69 1503 aa22.06■■□□□ 1.12
SYNCRIP-202ENST00000369622 FOXD1Q16676 465 aa22.06■■□□□ 1.12
SYNCRIP-202ENST00000369622 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.04■■□□□ 1.122e-12■■■□□ 18.7
SYNCRIP-202ENST00000369622 UACAQ9BZF9 1416 aa22.04■■□□□ 1.12
SYNCRIP-202ENST00000369622 CNGB1Q14028 1251 aaPredicted RBP22.04■■□□□ 1.12
SYNCRIP-202ENST00000369622 UBE2Q2Q8WVN8 375 aa22.04■■□□□ 1.12
SYNCRIP-202ENST00000369622 NCOA2Q15596 1464 aa22.03■■□□□ 1.12
SYNCRIP-202ENST00000369622 DNAJC5BQ9UF47 199 aa22.03■■□□□ 1.12
SYNCRIP-202ENST00000369622 MYT1LQ9UL68 1186 aa22.03■■□□□ 1.12
SYNCRIP-202ENST00000369622 HFM1A2PYH4 1435 aa22.02■■□□□ 1.12
SYNCRIP-202ENST00000369622 AQRO60306 1485 aaKnown RBP eCLIP22.02■■□□□ 1.121e-6■■■□□ 15.7
SYNCRIP-202ENST00000369622 EIF5BO60841 1220 aaKnown RBP22.01■■□□□ 1.11
SYNCRIP-202ENST00000369622 PAK3O75914 559 aaPredicted RBP22.01■■□□□ 1.11
SYNCRIP-202ENST00000369622 HSPA5P11021 654 aaKnown RBP22.01■■□□□ 1.11
SYNCRIP-202ENST00000369622 NAIPQ13075 1403 aa22.01■■□□□ 1.11
SYNCRIP-202ENST00000369622 MYOM3Q5VTT5 1437 aa22■■□□□ 1.11
SYNCRIP-202ENST00000369622 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
SYNCRIP-202ENST00000369622 GAPVD1Q14C86 1478 aa21.97■■□□□ 1.11
SYNCRIP-202ENST00000369622 URB2Q14146 1524 aaKnown RBP21.95■■□□□ 1.1
SYNCRIP-202ENST00000369622 CUL7Q14999 1698 aa21.94■■□□□ 1.1
SYNCRIP-202ENST00000369622 EIF4G2P78344 907 aaKnown RBP eCLIP21.94■■□□□ 1.1
SYNCRIP-202ENST00000369622 PTPN23Q9H3S7 1636 aa21.94■■□□□ 1.1
SYNCRIP-202ENST00000369622 WASHC2AQ641Q2 1341 aa21.93■■□□□ 1.1
SYNCRIP-202ENST00000369622 FAM9BQ8IZU0 186 aa21.93■■□□□ 1.1
SYNCRIP-202ENST00000369622 CTTNBP2Q8WZ74 1663 aa21.93■■□□□ 1.1
SYNCRIP-202ENST00000369622 MPHOSPH9Q99550 1183 aa21.91■■□□□ 1.1
SYNCRIP-202ENST00000369622 L3MBTL2Q969R5 705 aa21.91■■□□□ 1.1
SYNCRIP-202ENST00000369622 ERICH6BQ5W0A0 696 aa21.9■■□□□ 1.1
SYNCRIP-202ENST00000369622 NOP58Q9Y2X3 529 aaKnown RBP21.9■■□□□ 1.1
SYNCRIP-202ENST00000369622 POLR3GLQ9BT43 218 aa21.9■■□□□ 1.1
SYNCRIP-202ENST00000369622 CCDC184Q52MB2 194 aa21.88■■□□□ 1.09
SYNCRIP-202ENST00000369622 RTL5Q5HYW3 569 aaPredicted RBP21.88■■□□□ 1.09
SYNCRIP-202ENST00000369622 GRIN2BQ13224 1484 aa21.86■■□□□ 1.09
SYNCRIP-202ENST00000369622 C11orf95C9JLR9 678 aaPredicted RBP21.83■■□□□ 1.08
SYNCRIP-202ENST00000369622 ZNF326Q5BKZ1 582 aaKnown RBP21.83■■□□□ 1.08
SYNCRIP-202ENST00000369622 SUPT6HQ7KZ85 1726 aaKnown RBP21.82■■□□□ 1.08
SYNCRIP-202ENST00000369622 MRS2Q9HD23 443 aa21.82■■□□□ 1.08
SYNCRIP-202ENST00000369622 PDS5BQ9NTI5 1447 aa21.81■■□□□ 1.08
SYNCRIP-202ENST00000369622 SLC4A1APQ9BWU0 796 aaKnown RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms