RNA–Protein interactions for RNA: ENST00000368914.7

SEMA6C-204, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,892 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-204ENST00000368914 PRXQ9BXM0 1461 aa21.22■□□□□ 0.99
SEMA6C-204ENST00000368914 HRCP23327 699 aa21.22■□□□□ 0.99
SEMA6C-204ENST00000368914 VPS8Q8N3P4 1428 aa21.19■□□□□ 0.98
SEMA6C-204ENST00000368914 ABCA10Q8WWZ4 1543 aa21.18■□□□□ 0.98
SEMA6C-204ENST00000368914 BIVM-ERCC5R4GMW8 1640 aa21.17■□□□□ 0.98
SEMA6C-204ENST00000368914 GRIN2BQ13224 1484 aa21.14■□□□□ 0.97
SEMA6C-204ENST00000368914 SNAPC4Q5SXM2 1469 aa21.14■□□□□ 0.97
SEMA6C-204ENST00000368914 IFT140Q96RY7 1462 aa21.14■□□□□ 0.97
SEMA6C-204ENST00000368914 CDK11AQ9UQ88 783 aaPredicted RBP21.13■□□□□ 0.97
SEMA6C-204ENST00000368914 TRIM52Q96A61 297 aa21.11■□□□□ 0.97
SEMA6C-204ENST00000368914 ARAP1Q96P48 1450 aa21.09■□□□□ 0.97
SEMA6C-204ENST00000368914 FHAD1B1AJZ9 1412 aa21.08■□□□□ 0.96
SEMA6C-204ENST00000368914 NEUROD1Q13562 356 aa21.07■□□□□ 0.96
SEMA6C-204ENST00000368914 PLEKHD1A6NEE1 506 aa21.05■□□□□ 0.96
SEMA6C-204ENST00000368914 KIF21BO75037 1637 aa21.04■□□□□ 0.96
SEMA6C-204ENST00000368914 ARHGAP35Q9NRY4 1499 aa21.03■□□□□ 0.96
SEMA6C-204ENST00000368914 NPM1P06748 294 aaKnown RBP eCLIP21.03■□□□□ 0.96
SEMA6C-204ENST00000368914 RRP7BPQ9NSQ0 103 aa21.03■□□□□ 0.96
SEMA6C-204ENST00000368914 OSCARQ8IYS5 282 aa20.98■□□□□ 0.95
SEMA6C-204ENST00000368914 CYB5RLQ6IPT4 315 aa20.96■□□□□ 0.95
SEMA6C-204ENST00000368914 ERICH3Q5RHP9 1530 aa20.95■□□□□ 0.94
SEMA6C-204ENST00000368914 ZEB1P37275 1124 aaPredicted RBP20.94■□□□□ 0.94
SEMA6C-204ENST00000368914 CARMIL2Q6F5E8 1435 aa20.93■□□□□ 0.94
SEMA6C-204ENST00000368914 CFDP1Q9UEE9 299 aaPredicted RBP20.92■□□□□ 0.94
SEMA6C-204ENST00000368914 FMN1Q68DA7 1419 aa20.9■□□□□ 0.94
SEMA6C-204ENST00000368914 PRDM2Q13029 1718 aa20.88■□□□□ 0.93
SEMA6C-204ENST00000368914 PTPRGP23470 1445 aa20.86■□□□□ 0.93
SEMA6C-204ENST00000368914 WDR62O43379 1518 aa20.84■□□□□ 0.93
SEMA6C-204ENST00000368914 PRG4Q92954 1404 aaPredicted RBP20.84■□□□□ 0.93
SEMA6C-204ENST00000368914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.83■□□□□ 0.927e-6■□□□□ 10.8
SEMA6C-204ENST00000368914 GRIN2AQ12879 1464 aa20.82■□□□□ 0.92
SEMA6C-204ENST00000368914 CCNB3Q8WWL7 1395 aa20.82■□□□□ 0.92
SEMA6C-204ENST00000368914 ZNF644Q9H582 1327 aaPredicted RBP20.79■□□□□ 0.92
SEMA6C-204ENST00000368914 SYNJ2O15056 1496 aa20.79■□□□□ 0.92
SEMA6C-204ENST00000368914 EIF4G3O43432 1585 aaKnown RBP20.77■□□□□ 0.92
SEMA6C-204ENST00000368914 TARBP1Q13395 1621 aaKnown RBP20.76■□□□□ 0.91
SEMA6C-204ENST00000368914 ZNF326Q5BKZ1 582 aaKnown RBP20.76■□□□□ 0.91
SEMA6C-204ENST00000368914 TSPY4P0CV99 314 aa20.75■□□□□ 0.91
SEMA6C-204ENST00000368914 TSPY10P0CW01 314 aa20.75■□□□□ 0.91
SEMA6C-204ENST00000368914 PLPPR3Q6T4P5 718 aa20.73■□□□□ 0.91
SEMA6C-204ENST00000368914 PHLDB1Q86UU1 1377 aa20.73■□□□□ 0.91
SEMA6C-204ENST00000368914 KIAA0586Q9BVV6 1533 aa20.72■□□□□ 0.91
SEMA6C-204ENST00000368914 CNGB1Q14028 1251 aaPredicted RBP20.72■□□□□ 0.91
SEMA6C-204ENST00000368914 HNRNPMP52272 730 aaKnown RBP eCLIP20.71■□□□□ 0.91
SEMA6C-204ENST00000368914 MAGI1Q96QZ7 1491 aaPredicted RBP20.71■□□□□ 0.91
SEMA6C-204ENST00000368914 CUL7Q14999 1698 aa20.7■□□□□ 0.9
SEMA6C-204ENST00000368914 PLB1Q6P1J6 1458 aa20.69■□□□□ 0.9
SEMA6C-204ENST00000368914 SENP3Q9H4L4 574 aaPredicted RBP20.68■□□□□ 0.9
SEMA6C-204ENST00000368914 IQGAP2Q13576 1575 aa20.68■□□□□ 0.9
SEMA6C-204ENST00000368914 POLR3GLQ9BT43 218 aa20.67■□□□□ 0.9
SEMA6C-204ENST00000368914 SIN3AQ96ST3 1273 aa20.67■□□□□ 0.9
SEMA6C-204ENST00000368914 THOC2Q8NI27 1593 aaKnown RBP20.66■□□□□ 0.9
SEMA6C-204ENST00000368914 ABCA5Q8WWZ7 1642 aa20.66■□□□□ 0.9
SEMA6C-204ENST00000368914 FOXD1Q16676 465 aa20.66■□□□□ 0.9
SEMA6C-204ENST00000368914 CDK13Q14004 1512 aaKnown RBP20.65■□□□□ 0.9
SEMA6C-204ENST00000368914 CASKIN1Q8WXD9 1431 aa20.63■□□□□ 0.89
SEMA6C-204ENST00000368914 TRHP20396 242 aaPredicted RBP20.61■□□□□ 0.89
SEMA6C-204ENST00000368914 LRRC9Q6ZRR7 1453 aa20.61■□□□□ 0.89
SEMA6C-204ENST00000368914 HIRIP3Q9BW71 556 aaPredicted RBP20.61■□□□□ 0.89
SEMA6C-204ENST00000368914 ADAMTS12P58397 1594 aa20.6■□□□□ 0.89
SEMA6C-204ENST00000368914 PCF11O94913 1555 aaKnown RBP20.57■□□□□ 0.88
SEMA6C-204ENST00000368914 SLC4A1APQ9BWU0 796 aaKnown RBP20.57■□□□□ 0.88
SEMA6C-204ENST00000368914 PBRM1Q86U86 1689 aa20.56■□□□□ 0.88
SEMA6C-204ENST00000368914 RAB3GAP2Q9H2M9 1393 aa20.52■□□□□ 0.88
SEMA6C-204ENST00000368914 EFCAB5A4FU69 1503 aa20.51■□□□□ 0.87
SEMA6C-204ENST00000368914 FYCO1Q9BQS8 1478 aa20.5■□□□□ 0.87
SEMA6C-204ENST00000368914 NCOA2Q15596 1464 aa20.49■□□□□ 0.87
SEMA6C-204ENST00000368914 CCDC18Q5T9S5 1454 aa20.49■□□□□ 0.87
SEMA6C-204ENST00000368914 YTHDC1Q96MU7 727 aaKnown RBP20.49■□□□□ 0.87
SEMA6C-204ENST00000368914 KDM2AQ9Y2K7 1162 aa20.48■□□□□ 0.87
SEMA6C-204ENST00000368914 EPRSP07814 1512 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-204ENST00000368914 CHGAP10645 457 aaKnown RBP20.47■□□□□ 0.87
SEMA6C-204ENST00000368914 TIAM1Q13009 1591 aa20.45■□□□□ 0.86
SEMA6C-204ENST00000368914 EFCAB2Q5VUJ9 269 aa20.45■□□□□ 0.86
SEMA6C-204ENST00000368914 RGL3Q3MIN7 710 aa20.45■□□□□ 0.86
SEMA6C-204ENST00000368914 CEP170Q5SW79 1584 aa20.45■□□□□ 0.86
SEMA6C-204ENST00000368914 MLECQ14165 292 aa20.43■□□□□ 0.86
SEMA6C-204ENST00000368914 FGD6Q6ZV73 1430 aa20.43■□□□□ 0.86
SEMA6C-204ENST00000368914 AFAP1Q8N556 730 aa20.43■□□□□ 0.86
SEMA6C-204ENST00000368914 DISP1Q96F81 1524 aa20.42■□□□□ 0.86
SEMA6C-204ENST00000368914 SETD5Q9C0A6 1442 aa20.41■□□□□ 0.86
SEMA6C-204ENST00000368914 NUP160Q12769 1436 aa20.41■□□□□ 0.86
SEMA6C-204ENST00000368914 FAM69CQ0P6D2 419 aa20.41■□□□□ 0.86
SEMA6C-204ENST00000368914 CTTNBP2Q8WZ74 1663 aa20.4■□□□□ 0.86
SEMA6C-204ENST00000368914 UACAQ9BZF9 1416 aa20.4■□□□□ 0.86
SEMA6C-204ENST00000368914 WDR97A6NE52 1622 aa20.4■□□□□ 0.86
SEMA6C-204ENST00000368914 MYOM3Q5VTT5 1437 aa20.39■□□□□ 0.85
SEMA6C-204ENST00000368914 GGT6Q6P531 493 aa20.38■□□□□ 0.85
SEMA6C-204ENST00000368914 DIEXFQ68CQ4 756 aaKnown RBP20.37■□□□□ 0.85
SEMA6C-204ENST00000368914 TONSLQ96HA7 1378 aa20.37■□□□□ 0.85
SEMA6C-204ENST00000368914 NUP153P49790 1475 aaKnown RBP20.34■□□□□ 0.85
SEMA6C-204ENST00000368914 ARHGEF11O15085 1522 aa20.32■□□□□ 0.84
SEMA6C-204ENST00000368914 ARID4BQ4LE39 1312 aaPredicted RBP20.32■□□□□ 0.84
SEMA6C-204ENST00000368914 TROQ12816 1431 aaPredicted RBP20.32■□□□□ 0.84
SEMA6C-204ENST00000368914 PKD2Q13563 968 aa20.31■□□□□ 0.84
SEMA6C-204ENST00000368914 UGGT2Q9NYU1 1516 aa20.3■□□□□ 0.84
SEMA6C-204ENST00000368914 KIAA0556O60303 1618 aa20.3■□□□□ 0.84
SEMA6C-204ENST00000368914 ZNF316A6NFI3 1004 aaPredicted RBP20.3■□□□□ 0.84
SEMA6C-204ENST00000368914 MPHOSPH9Q99550 1183 aa20.3■□□□□ 0.84
SEMA6C-204ENST00000368914 ATP10BO94823 1461 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms