RNA–Protein interactions for RNA: ENST00000368884.7

PSMD4-202, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMD4, Length 1,350 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-202ENST00000368884 CSRNP3Q8WYN3 585 aa20.18■□□□□ 0.82
PSMD4-202ENST00000368884 PRXQ9BXM0 1461 aa20.16■□□□□ 0.82
PSMD4-202ENST00000368884 SHROOM2Q13796 1616 aa20.15■□□□□ 0.82
PSMD4-202ENST00000368884 KIAA0586Q9BVV6 1533 aa20.15■□□□□ 0.82
PSMD4-202ENST00000368884 JPH4Q96JJ6 628 aa20.11■□□□□ 0.81
PSMD4-202ENST00000368884 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
PSMD4-202ENST00000368884 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
PSMD4-202ENST00000368884 PRG4Q92954 1404 aaPredicted RBP20.08■□□□□ 0.8
PSMD4-202ENST00000368884 CYB5RLQ6IPT4 315 aa20.07■□□□□ 0.8
PSMD4-202ENST00000368884 IQGAP2Q13576 1575 aa20.06■□□□□ 0.8
PSMD4-202ENST00000368884 CTTNBP2Q8WZ74 1663 aa20.04■□□□□ 0.8
PSMD4-202ENST00000368884 KIF21BO75037 1637 aa20.02■□□□□ 0.79
PSMD4-202ENST00000368884 UGGT2Q9NYU1 1516 aa19.95■□□□□ 0.78
PSMD4-202ENST00000368884 CARMIL2Q6F5E8 1435 aa19.94■□□□□ 0.78
PSMD4-202ENST00000368884 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
PSMD4-202ENST00000368884 GOLGA3Q08378 1498 aa19.9■□□□□ 0.78
PSMD4-202ENST00000368884 DISP1Q96F81 1524 aa19.9■□□□□ 0.78
PSMD4-202ENST00000368884 KIAA0556O60303 1618 aa19.88■□□□□ 0.77
PSMD4-202ENST00000368884 TTBK1Q5TCY1 1321 aaPredicted RBP19.86■□□□□ 0.77
PSMD4-202ENST00000368884 TNIKQ9UKE5 1360 aa19.86■□□□□ 0.77
PSMD4-202ENST00000368884 UBTFP17480 764 aaKnown RBP19.85■□□□□ 0.77
PSMD4-202ENST00000368884 PTPRGP23470 1445 aa19.85■□□□□ 0.77
PSMD4-202ENST00000368884 RANGAP1P46060 587 aaPredicted RBP19.81■□□□□ 0.76
PSMD4-202ENST00000368884 SAMD9Q5K651 1589 aa19.77■□□□□ 0.76
PSMD4-202ENST00000368884 ADCY10Q96PN6 1610 aa19.76■□□□□ 0.75
PSMD4-202ENST00000368884 P3H3Q8IVL6 736 aa19.76■□□□□ 0.75
PSMD4-202ENST00000368884 UACAQ9BZF9 1416 aa19.71■□□□□ 0.75
PSMD4-202ENST00000368884 EFCAB5A4FU69 1503 aa19.7■□□□□ 0.74
PSMD4-202ENST00000368884 NPM1P06748 294 aaKnown RBP eCLIP19.7■□□□□ 0.74
PSMD4-202ENST00000368884 UHRF1BP1LA0JNW5 1464 aa19.69■□□□□ 0.74
PSMD4-202ENST00000368884 ABCC2Q92887 1545 aa19.68■□□□□ 0.74
PSMD4-202ENST00000368884 FHOD3Q2V2M9 1422 aa19.68■□□□□ 0.74
PSMD4-202ENST00000368884 PLB1Q6P1J6 1458 aa19.67■□□□□ 0.74
PSMD4-202ENST00000368884 TRHP20396 242 aaPredicted RBP19.65■□□□□ 0.74
PSMD4-202ENST00000368884 ABCA8O94911 1581 aa19.64■□□□□ 0.74
PSMD4-202ENST00000368884 ARHGAP35Q9NRY4 1499 aa19.62■□□□□ 0.73
PSMD4-202ENST00000368884 MAPKBP1O60336 1514 aa19.61■□□□□ 0.73
PSMD4-202ENST00000368884 KDM5BQ9UGL1 1544 aa19.58■□□□□ 0.73
PSMD4-202ENST00000368884 RAPGEF6Q8TEU7 1601 aa19.58■□□□□ 0.72
PSMD4-202ENST00000368884 LOC105371045A0A1W2PR82 267 aa19.57■□□□□ 0.72
PSMD4-202ENST00000368884 ZCCHC11Q5TAX3 1644 aaKnown RBP19.57■□□□□ 0.72
PSMD4-202ENST00000368884 CLIP1P30622 1438 aa19.55■□□□□ 0.72
PSMD4-202ENST00000368884 FMN1Q68DA7 1419 aa19.52■□□□□ 0.72
PSMD4-202ENST00000368884 ASXL2Q76L83 1435 aa19.52■□□□□ 0.72
PSMD4-202ENST00000368884 ARID3CA6NKF2 412 aa19.52■□□□□ 0.72
PSMD4-202ENST00000368884 ABCC10Q5T3U5 1492 aa19.49■□□□□ 0.71
PSMD4-202ENST00000368884 KIF13AQ9H1H9 1805 aa19.49■□□□□ 0.71
PSMD4-202ENST00000368884 ATP10BO94823 1461 aa19.49■□□□□ 0.71
PSMD4-202ENST00000368884 NUP153P49790 1475 aaKnown RBP19.49■□□□□ 0.71
PSMD4-202ENST00000368884 CEP162Q5TB80 1403 aa19.48■□□□□ 0.71
PSMD4-202ENST00000368884 DIP2BQ9P265 1576 aa19.48■□□□□ 0.71
PSMD4-202ENST00000368884 FAM69CQ0P6D2 419 aa19.46■□□□□ 0.71
PSMD4-202ENST00000368884 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.44■□□□□ 0.7
PSMD4-202ENST00000368884 HNRNPUL2Q1KMD3 747 aaKnown RBP19.44■□□□□ 0.7
PSMD4-202ENST00000368884 ATP1B4Q9UN42 357 aaPredicted RBP19.44■□□□□ 0.7
PSMD4-202ENST00000368884 WDR7Q9Y4E6 1490 aa19.44■□□□□ 0.7
PSMD4-202ENST00000368884 HECW1Q76N89 1606 aa19.43■□□□□ 0.7
PSMD4-202ENST00000368884 EPRSP07814 1512 aaKnown RBP19.4■□□□□ 0.7
PSMD4-202ENST00000368884 PCF11O94913 1555 aaKnown RBP19.4■□□□□ 0.7
PSMD4-202ENST00000368884 GLI2P10070 1586 aa19.38■□□□□ 0.69
PSMD4-202ENST00000368884 CDK13Q14004 1512 aaKnown RBP19.38■□□□□ 0.69
PSMD4-202ENST00000368884 CASKIN1Q8WXD9 1431 aa19.37■□□□□ 0.69
PSMD4-202ENST00000368884 KCNH8Q96L42 1107 aa19.37■□□□□ 0.69
PSMD4-202ENST00000368884 TSPOAP1O95153 1857 aa19.34■□□□□ 0.69
PSMD4-202ENST00000368884 LRRIQ1Q96JM4 1722 aa19.33■□□□□ 0.69
PSMD4-202ENST00000368884 FYCO1Q9BQS8 1478 aa19.33■□□□□ 0.69
PSMD4-202ENST00000368884 PLEKHD1A6NEE1 506 aa19.32■□□□□ 0.68
PSMD4-202ENST00000368884 MAP3K4Q9Y6R4 1608 aa19.31■□□□□ 0.68
PSMD4-202ENST00000368884 CCDC18Q5T9S5 1454 aa19.29■□□□□ 0.68
PSMD4-202ENST00000368884 CFAP43Q8NDM7 1665 aa19.28■□□□□ 0.68
PSMD4-202ENST00000368884 PPRC1Q5VV67 1664 aaKnown RBP19.27■□□□□ 0.68
PSMD4-202ENST00000368884 CDK11AQ9UQ88 783 aaPredicted RBP19.27■□□□□ 0.68
PSMD4-202ENST00000368884 CD109Q6YHK3 1445 aa19.25■□□□□ 0.67
PSMD4-202ENST00000368884 ABCA9Q8IUA7 1624 aa19.24■□□□□ 0.67
PSMD4-202ENST00000368884 VPS8Q8N3P4 1428 aa19.24■□□□□ 0.67
PSMD4-202ENST00000368884 TROQ12816 1431 aaPredicted RBP19.22■□□□□ 0.67
PSMD4-202ENST00000368884 TEX14Q8IWB6 1497 aa19.2■□□□□ 0.66
PSMD4-202ENST00000368884 MAGI3Q5TCQ9 1506 aa19.2■□□□□ 0.66
PSMD4-202ENST00000368884 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.2■□□□□ 0.66
PSMD4-202ENST00000368884 TTC37Q6PGP7 1564 aa19.18■□□□□ 0.66
PSMD4-202ENST00000368884 KIF14Q15058 1648 aa19.18■□□□□ 0.66
PSMD4-202ENST00000368884 KDM6BO15054 1643 aa19.16■□□□□ 0.66
PSMD4-202ENST00000368884 MTUS2Q5JR59 1369 aa19.11■□□□□ 0.65
PSMD4-202ENST00000368884 TIAM1Q13009 1591 aa19.1■□□□□ 0.65
PSMD4-202ENST00000368884 MYO5CQ9NQX4 1742 aa19.09■□□□□ 0.65
PSMD4-202ENST00000368884 EHBP1L1Q8N3D4 1523 aa19.09■□□□□ 0.65
PSMD4-202ENST00000368884 NEO1Q92859 1461 aa19.08■□□□□ 0.64
PSMD4-202ENST00000368884 PLCH2O75038 1416 aa19.07■□□□□ 0.64
PSMD4-202ENST00000368884 COL17A1Q9UMD9 1497 aaPredicted RBP19.07■□□□□ 0.64
PSMD4-202ENST00000368884 FANCAO15360 1455 aa19.06■□□□□ 0.64
PSMD4-202ENST00000368884 CFAP74Q9C0B2 1584 aa19.05■□□□□ 0.64
PSMD4-202ENST00000368884 PHLDB1Q86UU1 1377 aa19.05■□□□□ 0.64
PSMD4-202ENST00000368884 MAP3K1Q13233 1512 aa19.04■□□□□ 0.64
PSMD4-202ENST00000368884 APLP2Q06481 763 aa19.03■□□□□ 0.64
PSMD4-202ENST00000368884 ARHGAP5Q13017 1502 aa19.02■□□□□ 0.64
PSMD4-202ENST00000368884 ARAP3Q8WWN8 1544 aa19.02■□□□□ 0.64
PSMD4-202ENST00000368884 AKNAQ7Z591 1439 aa19.02■□□□□ 0.63
PSMD4-202ENST00000368884 LRRC9Q6ZRR7 1453 aa19.01■□□□□ 0.63
PSMD4-202ENST00000368884 PREX2Q70Z35 1606 aa19.01■□□□□ 0.63
PSMD4-202ENST00000368884 CDC42BPAQ5VT25 1732 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms