RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 KIF21BO75037 1637 aa22.84■■□□□ 1.25
TPM3-211ENST00000368531 CTTNBP2Q8WZ74 1663 aa22.79■■□□□ 1.24
TPM3-211ENST00000368531 KIAA0586Q9BVV6 1533 aa22.77■■□□□ 1.24
TPM3-211ENST00000368531 UBTFP17480 764 aaKnown RBP22.75■■□□□ 1.23
TPM3-211ENST00000368531 GOLGA3Q08378 1498 aa22.74■■□□□ 1.23
TPM3-211ENST00000368531 JPH4Q96JJ6 628 aa22.74■■□□□ 1.23
TPM3-211ENST00000368531 IQGAP2Q13576 1575 aa22.73■■□□□ 1.23
TPM3-211ENST00000368531 SHROOM2Q13796 1616 aa22.7■■□□□ 1.22
TPM3-211ENST00000368531 RANGAP1P46060 587 aaPredicted RBP22.68■■□□□ 1.22
TPM3-211ENST00000368531 RIMBP3CA6NJZ7 1639 aa22.68■■□□□ 1.22
TPM3-211ENST00000368531 RIMBP3BA6NNM3 1639 aa22.68■■□□□ 1.22
TPM3-211ENST00000368531 RIMBP3Q9UFD9 1639 aa22.68■■□□□ 1.22
TPM3-211ENST00000368531 ARHGEF11O15085 1522 aa22.67■■□□□ 1.22
TPM3-211ENST00000368531 PRG4Q92954 1404 aaPredicted RBP22.66■■□□□ 1.22
TPM3-211ENST00000368531 ERCC6L2Q5T890 1561 aa22.66■■□□□ 1.22
TPM3-211ENST00000368531 LOC105371045A0A1W2PR82 267 aa22.64■■□□□ 1.21
TPM3-211ENST00000368531 UGGT2Q9NYU1 1516 aa22.58■■□□□ 1.21
TPM3-211ENST00000368531 TTBK1Q5TCY1 1321 aaPredicted RBP22.57■■□□□ 1.2
TPM3-211ENST00000368531 CARMIL2Q6F5E8 1435 aa22.55■■□□□ 1.2
TPM3-211ENST00000368531 P3H3Q8IVL6 736 aa22.54■■□□□ 1.2
TPM3-211ENST00000368531 CYB5RLQ6IPT4 315 aa22.53■■□□□ 1.2
TPM3-211ENST00000368531 DISP1Q96F81 1524 aa22.52■■□□□ 1.2
TPM3-211ENST00000368531 ARAP1Q96P48 1450 aa22.52■■□□□ 1.2
TPM3-211ENST00000368531 KIAA0556O60303 1618 aa22.51■■□□□ 1.19
TPM3-211ENST00000368531 TNIKQ9UKE5 1360 aa22.5■■□□□ 1.19
TPM3-211ENST00000368531 SAMD9Q5K651 1589 aa22.45■■□□□ 1.18
TPM3-211ENST00000368531 PTPRGP23470 1445 aa22.42■■□□□ 1.18
TPM3-211ENST00000368531 EFCAB5A4FU69 1503 aa22.39■■□□□ 1.17
TPM3-211ENST00000368531 FHOD3Q2V2M9 1422 aa22.39■■□□□ 1.17
TPM3-211ENST00000368531 ARHGAP35Q9NRY4 1499 aa22.38■■□□□ 1.17
TPM3-211ENST00000368531 CLIP1P30622 1438 aa22.36■■□□□ 1.17
TPM3-211ENST00000368531 CEP162Q5TB80 1403 aa22.34■■□□□ 1.17
TPM3-211ENST00000368531 PLB1Q6P1J6 1458 aa22.28■■□□□ 1.16
TPM3-211ENST00000368531 UACAQ9BZF9 1416 aa22.27■■□□□ 1.16
TPM3-211ENST00000368531 ADCY10Q96PN6 1610 aa22.27■■□□□ 1.16
TPM3-211ENST00000368531 ABCA8O94911 1581 aa22.23■■□□□ 1.15
TPM3-211ENST00000368531 ATP1B4Q9UN42 357 aaPredicted RBP22.22■■□□□ 1.15
TPM3-211ENST00000368531 ABCC2Q92887 1545 aa22.21■■□□□ 1.15
TPM3-211ENST00000368531 RAPGEF6Q8TEU7 1601 aa22.21■■□□□ 1.15
TPM3-211ENST00000368531 ARID3CA6NKF2 412 aa22.21■■□□□ 1.15
TPM3-211ENST00000368531 NPM1P06748 294 aaKnown RBP eCLIP22.2■■□□□ 1.14
TPM3-211ENST00000368531 FMN1Q68DA7 1419 aa22.2■■□□□ 1.14
TPM3-211ENST00000368531 UHRF1BP1LA0JNW5 1464 aa22.18■■□□□ 1.14
TPM3-211ENST00000368531 ZCCHC11Q5TAX3 1644 aaKnown RBP22.13■■□□□ 1.13
TPM3-211ENST00000368531 PCF11O94913 1555 aaKnown RBP22.12■■□□□ 1.13
TPM3-211ENST00000368531 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.11■■□□□ 1.13
TPM3-211ENST00000368531 HNRNPUL2Q1KMD3 747 aaKnown RBP22.11■■□□□ 1.13
TPM3-211ENST00000368531 NUP153P49790 1475 aaKnown RBP22.1■■□□□ 1.13
TPM3-211ENST00000368531 KDM5BQ9UGL1 1544 aa22.1■■□□□ 1.13
TPM3-211ENST00000368531 HECW1Q76N89 1606 aa22.09■■□□□ 1.13
TPM3-211ENST00000368531 ATP10BO94823 1461 aa22.08■■□□□ 1.12
TPM3-211ENST00000368531 CASKIN1Q8WXD9 1431 aa22.06■■□□□ 1.12
TPM3-211ENST00000368531 LRRIQ1Q96JM4 1722 aa22.06■■□□□ 1.12
TPM3-211ENST00000368531 SENP3Q9H4L4 574 aaPredicted RBP22.05■■□□□ 1.12
TPM3-211ENST00000368531 CDK13Q14004 1512 aaKnown RBP22.03■■□□□ 1.12
TPM3-211ENST00000368531 VPS8Q8N3P4 1428 aa22.03■■□□□ 1.12
TPM3-211ENST00000368531 FYCO1Q9BQS8 1478 aa22.03■■□□□ 1.12
TPM3-211ENST00000368531 EPRSP07814 1512 aaKnown RBP22.01■■□□□ 1.11
TPM3-211ENST00000368531 ASXL2Q76L83 1435 aa22.01■■□□□ 1.11
TPM3-211ENST00000368531 TRHP20396 242 aaPredicted RBP22■■□□□ 1.11
TPM3-211ENST00000368531 MAPKBP1O60336 1514 aa22■■□□□ 1.11
TPM3-211ENST00000368531 KCNH8Q96L42 1107 aa21.96■■□□□ 1.11
TPM3-211ENST00000368531 PLEKHD1A6NEE1 506 aa21.94■■□□□ 1.1
TPM3-211ENST00000368531 CCDC18Q5T9S5 1454 aa21.93■■□□□ 1.1
TPM3-211ENST00000368531 WDR7Q9Y4E6 1490 aa21.93■■□□□ 1.1
TPM3-211ENST00000368531 KIF13AQ9H1H9 1805 aa21.9■■□□□ 1.1
TPM3-211ENST00000368531 FAM69CQ0P6D2 419 aa21.9■■□□□ 1.1
TPM3-211ENST00000368531 CDK11AQ9UQ88 783 aaPredicted RBP21.89■■□□□ 1.09
TPM3-211ENST00000368531 DIP2BQ9P265 1576 aa21.88■■□□□ 1.09
TPM3-211ENST00000368531 ABCC10Q5T3U5 1492 aa21.88■■□□□ 1.09
TPM3-211ENST00000368531 APLP2Q06481 763 aa21.86■■□□□ 1.09
TPM3-211ENST00000368531 CFAP43Q8NDM7 1665 aa21.85■■□□□ 1.09
TPM3-211ENST00000368531 MAGI3Q5TCQ9 1506 aa21.83■■□□□ 1.09
TPM3-211ENST00000368531 TSPOAP1O95153 1857 aa21.83■■□□□ 1.08
TPM3-211ENST00000368531 TIAM1Q13009 1591 aa21.82■■□□□ 1.08
TPM3-211ENST00000368531 TROQ12816 1431 aaPredicted RBP21.81■■□□□ 1.08
TPM3-211ENST00000368531 MTUS2Q5JR59 1369 aa21.8■■□□□ 1.08
TPM3-211ENST00000368531 GLI2P10070 1586 aa21.78■■□□□ 1.08
TPM3-211ENST00000368531 KIF14Q15058 1648 aa21.78■■□□□ 1.08
TPM3-211ENST00000368531 KANK4Q5T7N3 995 aaPredicted RBP21.76■■□□□ 1.07
TPM3-211ENST00000368531 MAP3K1Q13233 1512 aa21.75■■□□□ 1.07
TPM3-211ENST00000368531 MAP3K4Q9Y6R4 1608 aa21.74■■□□□ 1.07
TPM3-211ENST00000368531 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.74■■□□□ 1.073e-7■□□□□ 8.5
TPM3-211ENST00000368531 ABCA9Q8IUA7 1624 aa21.73■■□□□ 1.07
TPM3-211ENST00000368531 EHBP1L1Q8N3D4 1523 aa21.73■■□□□ 1.07
TPM3-211ENST00000368531 LRRC9Q6ZRR7 1453 aa21.72■■□□□ 1.07
TPM3-211ENST00000368531 PHF23Q9BUL5 403 aaPredicted RBP21.72■■□□□ 1.07
TPM3-211ENST00000368531 TTC37Q6PGP7 1564 aa21.72■■□□□ 1.07
TPM3-211ENST00000368531 CD109Q6YHK3 1445 aa21.72■■□□□ 1.07
TPM3-211ENST00000368531 PPARGC1BQ86YN6 1023 aaKnown RBP21.71■■□□□ 1.07
TPM3-211ENST00000368531 SUPT6HQ7KZ85 1726 aaKnown RBP21.67■■□□□ 1.06
TPM3-211ENST00000368531 PPRC1Q5VV67 1664 aaKnown RBP21.67■■□□□ 1.06
TPM3-211ENST00000368531 MYO5CQ9NQX4 1742 aa21.66■■□□□ 1.06
TPM3-211ENST00000368531 CDC42BPAQ5VT25 1732 aa21.62■■□□□ 1.05
TPM3-211ENST00000368531 NCOA2Q15596 1464 aa21.62■■□□□ 1.05
TPM3-211ENST00000368531 CCNB3Q8WWL7 1395 aa21.61■■□□□ 1.05
TPM3-211ENST00000368531 CDC42BPBQ9Y5S2 1711 aa21.6■■□□□ 1.05
TPM3-211ENST00000368531 TEX14Q8IWB6 1497 aa21.59■■□□□ 1.05
TPM3-211ENST00000368531 PLCH2O75038 1416 aa21.59■■□□□ 1.05
TPM3-211ENST00000368531 ARHGAP5Q13017 1502 aa21.58■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms