RNA–Protein interactions for RNA: ENST00000368378.7

THBS3-201, Transcript of thrombospondin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THBS3, Length 3,145 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-201ENST00000368378 PRXQ9BXM0 1461 aa12.81□□□□□ -0.36
THBS3-201ENST00000368378 KIF27Q86VH2 1401 aa12.81□□□□□ -0.36
THBS3-201ENST00000368378 TRIM52Q96A61 297 aa12.81□□□□□ -0.36
THBS3-201ENST00000368378 BIVM-ERCC5R4GMW8 1640 aa12.8□□□□□ -0.36
THBS3-201ENST00000368378 DHX57Q6P158 1386 aaKnown RBP12.8□□□□□ -0.36
THBS3-201ENST00000368378 ARID3CA6NKF2 412 aa12.79□□□□□ -0.36
THBS3-201ENST00000368378 FBLN2P98095 1184 aa12.79□□□□□ -0.36
THBS3-201ENST00000368378 SUPT16HQ9Y5B9 1047 aaKnown RBP12.78□□□□□ -0.36
THBS3-201ENST00000368378 PDS5BQ9NTI5 1447 aa12.78□□□□□ -0.36
THBS3-201ENST00000368378 ERICH3Q5RHP9 1530 aa12.76□□□□□ -0.37
THBS3-201ENST00000368378 SENP3-EIF4A1A0A087X0R7 540 aa12.74□□□□□ -0.37
THBS3-201ENST00000368378 FKBP8Q14318 412 aa12.73□□□□□ -0.37
THBS3-201ENST00000368378 CUX2O14529 1486 aa12.73□□□□□ -0.37
THBS3-201ENST00000368378 KIF21AQ7Z4S6 1674 aa12.72□□□□□ -0.37
THBS3-201ENST00000368378 ARHGAP35Q9NRY4 1499 aa12.72□□□□□ -0.37
THBS3-201ENST00000368378 CCNB3Q8WWL7 1395 aa12.72□□□□□ -0.37
THBS3-201ENST00000368378 IRX6P78412 446 aaPredicted RBP12.72□□□□□ -0.37
THBS3-201ENST00000368378 TDRD9Q8NDG6 1382 aaKnown RBP12.7□□□□□ -0.38
THBS3-201ENST00000368378 PRDM2Q13029 1718 aa12.69□□□□□ -0.38
THBS3-201ENST00000368378 RAD54L2Q9Y4B4 1467 aa12.69□□□□□ -0.38
THBS3-201ENST00000368378 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
THBS3-201ENST00000368378 LAMC3Q9Y6N6 1575 aa12.67□□□□□ -0.38
THBS3-201ENST00000368378 RRBP1Q9P2E9 1410 aaKnown RBP12.67□□□□□ -0.38
THBS3-201ENST00000368378 IGF1RP08069 1367 aa12.66□□□□□ -0.38
THBS3-201ENST00000368378 EIF5BO60841 1220 aaKnown RBP12.66□□□□□ -0.38
THBS3-201ENST00000368378 CARMIL1Q5VZK9 1371 aa12.65□□□□□ -0.38
THBS3-201ENST00000368378 RAB3GAP2Q9H2M9 1393 aa12.65□□□□□ -0.38
THBS3-201ENST00000368378 URB2Q14146 1524 aaKnown RBP12.64□□□□□ -0.39
THBS3-201ENST00000368378 CHIC2Q9UKJ5 165 aa12.63□□□□□ -0.39
THBS3-201ENST00000368378 POLR3GLQ9BT43 218 aa12.62□□□□□ -0.39
THBS3-201ENST00000368378 FGD5Q6ZNL6 1462 aa12.62□□□□□ -0.39
THBS3-201ENST00000368378 TSHZ2Q9NRE2 1034 aa12.6□□□□□ -0.39
THBS3-201ENST00000368378 NEFLP07196 543 aa12.59□□□□□ -0.39
THBS3-201ENST00000368378 AQRO60306 1485 aaKnown RBP eCLIP12.59□□□□□ -0.39
THBS3-201ENST00000368378 TOPBP1Q92547 1522 aa12.59□□□□□ -0.39
THBS3-201ENST00000368378 PHLDB1Q86UU1 1377 aa12.59□□□□□ -0.39
THBS3-201ENST00000368378 MRC2Q9UBG0 1479 aa12.58□□□□□ -0.4
THBS3-201ENST00000368378 PLEKHG5O94827 1062 aa12.57□□□□□ -0.4
THBS3-201ENST00000368378 TIAM1Q13009 1591 aa12.56□□□□□ -0.4
THBS3-201ENST00000368378 DNMBPQ6XZF7 1577 aa12.56□□□□□ -0.4
THBS3-201ENST00000368378 FHOD3Q2V2M9 1422 aa12.56□□□□□ -0.4
THBS3-201ENST00000368378 ZNF608Q9ULD9 1512 aaPredicted RBP12.55□□□□□ -0.4
THBS3-201ENST00000368378 SETD5Q9C0A6 1442 aa12.55□□□□□ -0.4
THBS3-201ENST00000368378 ANP32CO43423 234 aa12.54□□□□□ -0.4
THBS3-201ENST00000368378 LRRC9Q6ZRR7 1453 aa12.54□□□□□ -0.4
THBS3-201ENST00000368378 POLA1P09884 1462 aaPredicted RBP12.54□□□□□ -0.4
THBS3-201ENST00000368378 RRP7BPQ9NSQ0 103 aa12.53□□□□□ -0.4
THBS3-201ENST00000368378 FOXD1Q16676 465 aa12.52□□□□□ -0.4
THBS3-201ENST00000368378 MAPKBP1O60336 1514 aa12.52□□□□□ -0.41
THBS3-201ENST00000368378 HNRNPUQ00839 825 aaKnown RBP eCLIP12.51□□□□□ -0.41
THBS3-201ENST00000368378 CHMP7Q8WUX9 453 aaPredicted RBP12.5□□□□□ -0.41
THBS3-201ENST00000368378 FHAD1B1AJZ9 1412 aa12.5□□□□□ -0.41
THBS3-201ENST00000368378 PCF11O94913 1555 aaKnown RBP12.49□□□□□ -0.41
THBS3-201ENST00000368378 ZNF326Q5BKZ1 582 aaKnown RBP12.48□□□□□ -0.41
THBS3-201ENST00000368378 WDR97A6NE52 1622 aa12.48□□□□□ -0.41
THBS3-201ENST00000368378 ABCA10Q8WWZ4 1543 aa12.47□□□□□ -0.41
THBS3-201ENST00000368378 FAM9BQ8IZU0 186 aa12.47□□□□□ -0.41
THBS3-201ENST00000368378 TONSLQ96HA7 1378 aa12.46□□□□□ -0.42
THBS3-201ENST00000368378 PLPPR3Q6T4P5 718 aa12.46□□□□□ -0.42
THBS3-201ENST00000368378 THOC2Q8NI27 1593 aaKnown RBP12.45□□□□□ -0.42
THBS3-201ENST00000368378 MTUS2Q5JR59 1369 aa12.44□□□□□ -0.42
THBS3-201ENST00000368378 MAP3K1Q13233 1512 aa12.42□□□□□ -0.42
THBS3-201ENST00000368378 PPP1R15AO75807 674 aaPredicted RBP12.4□□□□□ -0.42
THBS3-201ENST00000368378 RBM19Q9Y4C8 960 aaKnown RBP12.4□□□□□ -0.42
THBS3-201ENST00000368378 CFAP43Q8NDM7 1665 aa12.39□□□□□ -0.43
THBS3-201ENST00000368378 WDR62O43379 1518 aa12.39□□□□□ -0.43
THBS3-201ENST00000368378 ANP32EQ9BTT0 268 aa12.38□□□□□ -0.43
THBS3-201ENST00000368378 GAPVD1Q14C86 1478 aa12.38□□□□□ -0.43
THBS3-201ENST00000368378 FYCO1Q9BQS8 1478 aa12.37□□□□□ -0.43
THBS3-201ENST00000368378 CASKIN1Q8WXD9 1431 aa12.37□□□□□ -0.43
THBS3-201ENST00000368378 CCDC184Q52MB2 194 aa12.37□□□□□ -0.43
THBS3-201ENST00000368378 FGD6Q6ZV73 1430 aa12.36□□□□□ -0.43
THBS3-201ENST00000368378 SALL2Q9Y467 1007 aaPredicted RBP12.36□□□□□ -0.43
THBS3-201ENST00000368378 FMN1Q68DA7 1419 aa12.34□□□□□ -0.43
THBS3-201ENST00000368378 CCDC18Q5T9S5 1454 aa12.34□□□□□ -0.43
THBS3-201ENST00000368378 IFT140Q96RY7 1462 aa12.34□□□□□ -0.43
THBS3-201ENST00000368378 ZNF777Q9ULD5 760 aaPredicted RBP12.34□□□□□ -0.43
THBS3-201ENST00000368378 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
THBS3-201ENST00000368378 B4GALNT3Q6L9W6 998 aa12.33□□□□□ -0.44
THBS3-201ENST00000368378 SNAPC4Q5SXM2 1469 aa12.33□□□□□ -0.44
THBS3-201ENST00000368378 EFCAB5A4FU69 1503 aa12.32□□□□□ -0.44
THBS3-201ENST00000368378 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
THBS3-201ENST00000368378 CTTNBP2Q8WZ74 1663 aa12.32□□□□□ -0.44
THBS3-201ENST00000368378 CUL7Q14999 1698 aa12.31□□□□□ -0.44
THBS3-201ENST00000368378 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
THBS3-201ENST00000368378 TIMELESSQ9UNS1 1208 aa12.31□□□□□ -0.44
THBS3-201ENST00000368378 MRS2Q9HD23 443 aa12.3□□□□□ -0.44
THBS3-201ENST00000368378 NCOA2Q15596 1464 aa12.29□□□□□ -0.44
THBS3-201ENST00000368378 EIF4G3O43432 1585 aaKnown RBP12.29□□□□□ -0.44
THBS3-201ENST00000368378 TARBP1Q13395 1621 aaKnown RBP12.29□□□□□ -0.44
THBS3-201ENST00000368378 RTN4Q9NQC3 1192 aaKnown RBP12.29□□□□□ -0.44
THBS3-201ENST00000368378 ABCA5Q8WWZ7 1642 aa12.29□□□□□ -0.44
THBS3-201ENST00000368378 PHF23Q9BUL5 403 aaPredicted RBP12.26□□□□□ -0.45
THBS3-201ENST00000368378 CDK11AQ9UQ88 783 aaPredicted RBP12.26□□□□□ -0.45
THBS3-201ENST00000368378 MYOM3Q5VTT5 1437 aa12.26□□□□□ -0.45
THBS3-201ENST00000368378 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
THBS3-201ENST00000368378 UACAQ9BZF9 1416 aa12.26□□□□□ -0.45
THBS3-201ENST00000368378 HFM1A2PYH4 1435 aa12.25□□□□□ -0.45
THBS3-201ENST00000368378 NAIPQ13075 1403 aa12.25□□□□□ -0.45
THBS3-201ENST00000368378 NBR1Q14596 966 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms