RNA–Protein interactions for RNA: ENST00000367927.9

VNN3-202, Transcript of vanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VNN3, Length 1,717 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-202ENST00000367927 TDRD9Q8NDG6 1382 aaKnown RBP11.21□□□□□ -0.61
VNN3-202ENST00000367927 IFT140Q96RY7 1462 aa11.21□□□□□ -0.62
VNN3-202ENST00000367927 RANGAP1P46060 587 aaPredicted RBP11.2□□□□□ -0.62
VNN3-202ENST00000367927 PBRM1Q86U86 1689 aa11.19□□□□□ -0.62
VNN3-202ENST00000367927 APLP2Q06481 763 aa11.19□□□□□ -0.62
VNN3-202ENST00000367927 THOC2Q8NI27 1593 aaKnown RBP11.19□□□□□ -0.62
VNN3-202ENST00000367927 CTTNBP2Q8WZ74 1663 aa11.18□□□□□ -0.62
VNN3-202ENST00000367927 RTN4Q9NQC3 1192 aaKnown RBP11.16□□□□□ -0.62
VNN3-202ENST00000367927 ARAP1Q96P48 1450 aa11.16□□□□□ -0.62
VNN3-202ENST00000367927 PPARGC1BQ86YN6 1023 aaKnown RBP11.15□□□□□ -0.62
VNN3-202ENST00000367927 GRIN2BQ13224 1484 aa11.15□□□□□ -0.62
VNN3-202ENST00000367927 NPM3O75607 178 aaKnown RBP11.15□□□□□ -0.63
VNN3-202ENST00000367927 ARHGAP35Q9NRY4 1499 aa11.14□□□□□ -0.63
VNN3-202ENST00000367927 NCBP3Q53F19 620 aaKnown RBP11.12□□□□□ -0.63
VNN3-202ENST00000367927 FHAD1B1AJZ9 1412 aa11.12□□□□□ -0.63
VNN3-202ENST00000367927 AQRO60306 1485 aaKnown RBP eCLIP11.12□□□□□ -0.63
VNN3-202ENST00000367927 EFCAB5A4FU69 1503 aa11.12□□□□□ -0.63
VNN3-202ENST00000367927 ADAMTS12P58397 1594 aa11.11□□□□□ -0.63
VNN3-202ENST00000367927 EIF4G3O43432 1585 aaKnown RBP11.09□□□□□ -0.63
VNN3-202ENST00000367927 PIAS4Q8N2W9 510 aaPredicted RBP11.09□□□□□ -0.63
VNN3-202ENST00000367927 ZNF608Q9ULD9 1512 aaPredicted RBP11.09□□□□□ -0.63
VNN3-202ENST00000367927 MSH5O43196 834 aa11.07□□□□□ -0.64
VNN3-202ENST00000367927 HRCP23327 699 aa11.07□□□□□ -0.64
VNN3-202ENST00000367927 TTBK1Q5TCY1 1321 aaPredicted RBP11.06□□□□□ -0.64
VNN3-202ENST00000367927 MAGI1Q96QZ7 1491 aaPredicted RBP11.05□□□□□ -0.64
VNN3-202ENST00000367927 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
VNN3-202ENST00000367927 MAP3K1Q13233 1512 aa11.04□□□□□ -0.64
VNN3-202ENST00000367927 FMN1Q68DA7 1419 aa11.03□□□□□ -0.64
VNN3-202ENST00000367927 IQGAP2Q13576 1575 aa11.03□□□□□ -0.64
VNN3-202ENST00000367927 SAMD9Q5K651 1589 aa11.03□□□□□ -0.64
VNN3-202ENST00000367927 P3H3Q8IVL6 736 aa11.01□□□□□ -0.65
VNN3-202ENST00000367927 FHOD3Q2V2M9 1422 aa11□□□□□ -0.65
VNN3-202ENST00000367927 FYCO1Q9BQS8 1478 aa11□□□□□ -0.65
VNN3-202ENST00000367927 SYNJ2O15056 1496 aa11□□□□□ -0.65
VNN3-202ENST00000367927 GRIN2AQ12879 1464 aa11□□□□□ -0.65
VNN3-202ENST00000367927 PCF11O94913 1555 aaKnown RBP10.99□□□□□ -0.65
VNN3-202ENST00000367927 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
VNN3-202ENST00000367927 CASKIN1Q8WXD9 1431 aa10.98□□□□□ -0.65
VNN3-202ENST00000367927 CHMP7Q8WUX9 453 aaPredicted RBP10.98□□□□□ -0.65
VNN3-202ENST00000367927 CFAP43Q8NDM7 1665 aa10.98□□□□□ -0.65
VNN3-202ENST00000367927 KIAA0586Q9BVV6 1533 aa10.98□□□□□ -0.65
VNN3-202ENST00000367927 ZEB1P37275 1124 aaPredicted RBP10.98□□□□□ -0.65
VNN3-202ENST00000367927 AMER1Q5JTC6 1135 aaPredicted RBP10.97□□□□□ -0.65
VNN3-202ENST00000367927 UGGT2Q9NYU1 1516 aa10.96□□□□□ -0.65
VNN3-202ENST00000367927 KANK4Q5T7N3 995 aaPredicted RBP10.95□□□□□ -0.66
VNN3-202ENST00000367927 PELP1Q8IZL8 1130 aaKnown RBP10.95□□□□□ -0.66
VNN3-202ENST00000367927 ATP1B4Q9UN42 357 aaPredicted RBP10.95□□□□□ -0.66
VNN3-202ENST00000367927 LRRC9Q6ZRR7 1453 aa10.93□□□□□ -0.66
VNN3-202ENST00000367927 FBLN2P98095 1184 aa10.92□□□□□ -0.66
VNN3-202ENST00000367927 CEP170Q5SW79 1584 aa10.91□□□□□ -0.66
VNN3-202ENST00000367927 NUP160Q12769 1436 aa10.91□□□□□ -0.66
VNN3-202ENST00000367927 HECW1Q76N89 1606 aa10.9□□□□□ -0.66
VNN3-202ENST00000367927 RRBP1Q9P2E9 1410 aaKnown RBP10.9□□□□□ -0.66
VNN3-202ENST00000367927 KIAA0556O60303 1618 aa10.9□□□□□ -0.67
VNN3-202ENST00000367927 CCDC18Q5T9S5 1454 aa10.89□□□□□ -0.67
VNN3-202ENST00000367927 CARMIL2Q6F5E8 1435 aa10.87□□□□□ -0.67
VNN3-202ENST00000367927 CCNB3Q8WWL7 1395 aa10.87□□□□□ -0.67
VNN3-202ENST00000367927 HNRNPUL2Q1KMD3 747 aaKnown RBP10.87□□□□□ -0.67
VNN3-202ENST00000367927 CCER1Q8TC90 406 aaPredicted RBP10.87□□□□□ -0.67
VNN3-202ENST00000367927 DISP1Q96F81 1524 aa10.86□□□□□ -0.67
VNN3-202ENST00000367927 MTUS2Q5JR59 1369 aa10.86□□□□□ -0.67
VNN3-202ENST00000367927 LRRIQ1Q96JM4 1722 aa10.86□□□□□ -0.67
VNN3-202ENST00000367927 CHD1O14646 1710 aa10.86□□□□□ -0.67
VNN3-202ENST00000367927 EHBP1L1Q8N3D4 1523 aa10.85□□□□□ -0.67
VNN3-202ENST00000367927 JPH4Q96JJ6 628 aa10.84□□□□□ -0.67
VNN3-202ENST00000367927 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.84□□□□□ -0.67
VNN3-202ENST00000367927 SUPT6HQ7KZ85 1726 aaKnown RBP10.83□□□□□ -0.68
VNN3-202ENST00000367927 RAPGEF6Q8TEU7 1601 aa10.82□□□□□ -0.68
VNN3-202ENST00000367927 EPRSP07814 1512 aaKnown RBP10.82□□□□□ -0.68
VNN3-202ENST00000367927 PHLDB1Q86UU1 1377 aa10.81□□□□□ -0.68
VNN3-202ENST00000367927 MYT1Q01538 1121 aa10.79□□□□□ -0.68
VNN3-202ENST00000367927 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.79□□□□□ -0.68
VNN3-202ENST00000367927 CDK11AQ9UQ88 783 aaPredicted RBP10.78□□□□□ -0.68
VNN3-202ENST00000367927 NCOA2Q15596 1464 aa10.78□□□□□ -0.68
VNN3-202ENST00000367927 FOXD4L1Q9NU39 408 aa10.78□□□□□ -0.68
VNN3-202ENST00000367927 CDK13Q14004 1512 aaKnown RBP10.76□□□□□ -0.69
VNN3-202ENST00000367927 FAM50AQ14320 339 aaKnown RBP10.76□□□□□ -0.69
VNN3-202ENST00000367927 FGD6Q6ZV73 1430 aa10.76□□□□□ -0.69
VNN3-202ENST00000367927 NUP153P49790 1475 aaKnown RBP10.76□□□□□ -0.69
VNN3-202ENST00000367927 SHROOM2Q13796 1616 aa10.76□□□□□ -0.69
VNN3-202ENST00000367927 CNKSR2Q8WXI2 1034 aa10.75□□□□□ -0.69
VNN3-202ENST00000367927 MYOM3Q5VTT5 1437 aa10.75□□□□□ -0.69
VNN3-202ENST00000367927 PRG4Q92954 1404 aaPredicted RBP10.75□□□□□ -0.69
VNN3-202ENST00000367927 ARHGEF11O15085 1522 aa10.74□□□□□ -0.69
VNN3-202ENST00000367927 MAGI3Q5TCQ9 1506 aa10.74□□□□□ -0.69
VNN3-202ENST00000367927 ITGAEP38570 1179 aa10.74□□□□□ -0.69
VNN3-202ENST00000367927 PLB1Q6P1J6 1458 aa10.73□□□□□ -0.69
VNN3-202ENST00000367927 ABCA8O94911 1581 aa10.72□□□□□ -0.69
VNN3-202ENST00000367927 PTPRGP23470 1445 aa10.72□□□□□ -0.69
VNN3-202ENST00000367927 CLSPNQ9HAW4 1339 aa10.71□□□□□ -0.69
VNN3-202ENST00000367927 ARID3CA6NKF2 412 aa10.71□□□□□ -0.69
VNN3-202ENST00000367927 PTPN23Q9H3S7 1636 aa10.71□□□□□ -0.7
VNN3-202ENST00000367927 CLASP1Q7Z460 1538 aa10.7□□□□□ -0.7
VNN3-202ENST00000367927 MIA2Q96PC5 1412 aa10.7□□□□□ -0.7
VNN3-202ENST00000367927 TROQ12816 1431 aaPredicted RBP10.69□□□□□ -0.7
VNN3-202ENST00000367927 SETD5Q9C0A6 1442 aa10.69□□□□□ -0.7
VNN3-202ENST00000367927 ADCY10Q96PN6 1610 aa10.68□□□□□ -0.7
VNN3-202ENST00000367927 ITSN2Q9NZM3 1697 aa10.68□□□□□ -0.7
VNN3-202ENST00000367927 TCOF1Q13428 1488 aaKnown RBP10.68□□□□□ -0.7
VNN3-202ENST00000367927 PLEKHD1A6NEE1 506 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms