RNA–Protein interactions for RNA: ENST00000366496.6

NLRP3-203, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-203ENST00000366496 NBR1Q14596 966 aa11.57□□□□□ -0.56
NLRP3-203ENST00000366496 EIF5BO60841 1220 aaKnown RBP11.56□□□□□ -0.56
NLRP3-203ENST00000366496 CEP164Q9UPV0 1460 aa11.56□□□□□ -0.56
NLRP3-203ENST00000366496 KIF27Q86VH2 1401 aa11.55□□□□□ -0.56
NLRP3-203ENST00000366496 MSH5O43196 834 aa11.54□□□□□ -0.56
NLRP3-203ENST00000366496 TRIM52Q96A61 297 aa11.54□□□□□ -0.56
NLRP3-203ENST00000366496 CUX2O14529 1486 aa11.53□□□□□ -0.56
NLRP3-203ENST00000366496 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.52□□□□□ -0.57
NLRP3-203ENST00000366496 POLR3GLQ9BT43 218 aa11.51□□□□□ -0.57
NLRP3-203ENST00000366496 CADPSQ9ULU8 1353 aa11.51□□□□□ -0.57
NLRP3-203ENST00000366496 RTN4Q9NQC3 1192 aaKnown RBP11.51□□□□□ -0.57
NLRP3-203ENST00000366496 KANK4Q5T7N3 995 aaPredicted RBP11.5□□□□□ -0.57
NLRP3-203ENST00000366496 RAPGEF2Q9Y4G8 1499 aa11.49□□□□□ -0.57
NLRP3-203ENST00000366496 CHIC2Q9UKJ5 165 aa11.48□□□□□ -0.57
NLRP3-203ENST00000366496 ZNF777Q9ULD5 760 aaPredicted RBP11.47□□□□□ -0.57
NLRP3-203ENST00000366496 NOP58Q9Y2X3 529 aaKnown RBP11.46□□□□□ -0.57
NLRP3-203ENST00000366496 GLIPR1L2Q4G1C9 344 aa11.46□□□□□ -0.57
NLRP3-203ENST00000366496 TDRD9Q8NDG6 1382 aaKnown RBP11.46□□□□□ -0.57
NLRP3-203ENST00000366496 HMGXB3Q12766 1538 aa11.46□□□□□ -0.58
NLRP3-203ENST00000366496 CARMIL1Q5VZK9 1371 aa11.46□□□□□ -0.58
NLRP3-203ENST00000366496 ANP32AP39687 249 aaKnown RBP11.42□□□□□ -0.58
NLRP3-203ENST00000366496 PKNOX2Q96KN3 472 aa11.41□□□□□ -0.58
NLRP3-203ENST00000366496 CHMP7Q8WUX9 453 aaPredicted RBP11.41□□□□□ -0.58
NLRP3-203ENST00000366496 HIRIP3Q9BW71 556 aaPredicted RBP11.41□□□□□ -0.58
NLRP3-203ENST00000366496 ZNF326Q5BKZ1 582 aaKnown RBP11.4□□□□□ -0.58
NLRP3-203ENST00000366496 OSCARQ8IYS5 282 aa11.4□□□□□ -0.58
NLRP3-203ENST00000366496 MTUS2Q5JR59 1369 aa11.39□□□□□ -0.59
NLRP3-203ENST00000366496 VPS8Q8N3P4 1428 aa11.39□□□□□ -0.59
NLRP3-203ENST00000366496 SYNJ1O43426 1573 aa11.38□□□□□ -0.59
NLRP3-203ENST00000366496 FANCD2Q9BXW9 1451 aa11.37□□□□□ -0.59
NLRP3-203ENST00000366496 IL27Q8NEV9 243 aa11.36□□□□□ -0.59
NLRP3-203ENST00000366496 RRP7BPQ9NSQ0 103 aa11.36□□□□□ -0.59
NLRP3-203ENST00000366496 ZBTB47Q9UFB7 747 aaPredicted RBP11.36□□□□□ -0.59
NLRP3-203ENST00000366496 ANP32CO43423 234 aa11.35□□□□□ -0.59
NLRP3-203ENST00000366496 TRHP20396 242 aaPredicted RBP11.35□□□□□ -0.59
NLRP3-203ENST00000366496 LAMC3Q9Y6N6 1575 aa11.34□□□□□ -0.59
NLRP3-203ENST00000366496 MRC2Q9UBG0 1479 aa11.33□□□□□ -0.59
NLRP3-203ENST00000366496 KCNH8Q96L42 1107 aa11.33□□□□□ -0.6
NLRP3-203ENST00000366496 RAD54L2Q9Y4B4 1467 aa11.32□□□□□ -0.6
NLRP3-203ENST00000366496 SLC24A1O60721 1099 aa11.32□□□□□ -0.6
NLRP3-203ENST00000366496 IRX6P78412 446 aaPredicted RBP11.32□□□□□ -0.6
NLRP3-203ENST00000366496 SIN3AQ96ST3 1273 aa11.31□□□□□ -0.6
NLRP3-203ENST00000366496 DDX10Q13206 875 aaKnown RBP11.3□□□□□ -0.6
NLRP3-203ENST00000366496 IGF1RP08069 1367 aa11.29□□□□□ -0.6
NLRP3-203ENST00000366496 PPP4R2Q9NY27 417 aa11.29□□□□□ -0.6
NLRP3-203ENST00000366496 FHOD3Q2V2M9 1422 aa11.28□□□□□ -0.6
NLRP3-203ENST00000366496 FGD5Q6ZNL6 1462 aa11.28□□□□□ -0.6
NLRP3-203ENST00000366496 CYB5RLQ6IPT4 315 aa11.28□□□□□ -0.6
NLRP3-203ENST00000366496 CCNB3Q8WWL7 1395 aa11.27□□□□□ -0.6
NLRP3-203ENST00000366496 NEFMP07197 916 aa11.25□□□□□ -0.61
NLRP3-203ENST00000366496 CFTRP13569 1480 aa11.25□□□□□ -0.61
NLRP3-203ENST00000366496 HNRNPUQ00839 825 aaKnown RBP eCLIP11.25□□□□□ -0.61
NLRP3-203ENST00000366496 TONSLQ96HA7 1378 aa11.23□□□□□ -0.61
NLRP3-203ENST00000366496 CUX1P39880 1505 aa11.23□□□□□ -0.61
NLRP3-203ENST00000366496 CCER2I3L3R5 266 aa11.23□□□□□ -0.61
NLRP3-203ENST00000366496 PEG3Q9GZU2 1588 aa11.23□□□□□ -0.61
NLRP3-203ENST00000366496 PODXL2Q9NZ53 605 aa11.23□□□□□ -0.61
NLRP3-203ENST00000366496 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
NLRP3-203ENST00000366496 IPO9Q96P70 1041 aaKnown RBP11.22□□□□□ -0.61
NLRP3-203ENST00000366496 PAK3O75914 559 aaPredicted RBP11.21□□□□□ -0.62
NLRP3-203ENST00000366496 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.2□□□□□ -0.62
NLRP3-203ENST00000366496 FHAD1B1AJZ9 1412 aa11.19□□□□□ -0.62
NLRP3-203ENST00000366496 USP35Q9P2H5 1018 aa11.19□□□□□ -0.62
NLRP3-203ENST00000366496 KIF21AQ7Z4S6 1674 aa11.19□□□□□ -0.62
NLRP3-203ENST00000366496 KIF21BO75037 1637 aa11.18□□□□□ -0.62
NLRP3-203ENST00000366496 PPM1GO15355 546 aaPredicted RBP11.18□□□□□ -0.62
NLRP3-203ENST00000366496 DAXXQ9UER7 740 aaPredicted RBP11.18□□□□□ -0.62
NLRP3-203ENST00000366496 B4GALNT3Q6L9W6 998 aa11.18□□□□□ -0.62
NLRP3-203ENST00000366496 ARAP1Q96P48 1450 aa11.17□□□□□ -0.62
NLRP3-203ENST00000366496 NPM2Q86SE8 214 aaKnown RBP11.17□□□□□ -0.62
NLRP3-203ENST00000366496 FOXD1Q16676 465 aa11.17□□□□□ -0.62
NLRP3-203ENST00000366496 VSIG10Q8N0Z9 540 aa11.17□□□□□ -0.62
NLRP3-203ENST00000366496 CFDP1Q9UEE9 299 aaPredicted RBP11.16□□□□□ -0.62
NLRP3-203ENST00000366496 TIMELESSQ9UNS1 1208 aa11.16□□□□□ -0.62
NLRP3-203ENST00000366496 LAS1LQ9Y4W2 734 aaKnown RBP11.15□□□□□ -0.62
NLRP3-203ENST00000366496 TOP2BQ02880 1626 aa11.15□□□□□ -0.62
NLRP3-203ENST00000366496 PLEKHD1A6NEE1 506 aa11.15□□□□□ -0.62
NLRP3-203ENST00000366496 SLC4A1APQ9BWU0 796 aaKnown RBP11.15□□□□□ -0.62
NLRP3-203ENST00000366496 KDM2AQ9Y2K7 1162 aa11.15□□□□□ -0.62
NLRP3-203ENST00000366496 AQRO60306 1485 aaKnown RBP eCLIP11.15□□□□□ -0.62
NLRP3-203ENST00000366496 RAB3GAP2Q9H2M9 1393 aa11.15□□□□□ -0.62
NLRP3-203ENST00000366496 DHX57Q6P158 1386 aaKnown RBP11.14□□□□□ -0.63
NLRP3-203ENST00000366496 PRXQ9BXM0 1461 aa11.13□□□□□ -0.63
NLRP3-203ENST00000366496 TSPY4P0CV99 314 aa11.12□□□□□ -0.63
NLRP3-203ENST00000366496 TSPY10P0CW01 314 aa11.12□□□□□ -0.63
NLRP3-203ENST00000366496 SENP3-EIF4A1A0A087X0R7 540 aa11.11□□□□□ -0.63
NLRP3-203ENST00000366496 ARHGAP35Q9NRY4 1499 aa11.11□□□□□ -0.63
NLRP3-203ENST00000366496 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
NLRP3-203ENST00000366496 THOC2Q8NI27 1593 aaKnown RBP11.1□□□□□ -0.63
NLRP3-203ENST00000366496 SENP3Q9H4L4 574 aaPredicted RBP11.1□□□□□ -0.63
NLRP3-203ENST00000366496 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
NLRP3-203ENST00000366496 BRPF3Q9ULD4 1205 aa11.1□□□□□ -0.63
NLRP3-203ENST00000366496 C11orf95C9JLR9 678 aaPredicted RBP11.09□□□□□ -0.63
NLRP3-203ENST00000366496 POLA1P09884 1462 aaPredicted RBP11.09□□□□□ -0.63
NLRP3-203ENST00000366496 IFT140Q96RY7 1462 aa11.09□□□□□ -0.63
NLRP3-203ENST00000366496 SETD5Q9C0A6 1442 aa11.09□□□□□ -0.63
NLRP3-203ENST00000366496 NPM1P06748 294 aaKnown RBP eCLIP11.09□□□□□ -0.63
NLRP3-203ENST00000366496 TOPBP1Q92547 1522 aa11.08□□□□□ -0.64
NLRP3-203ENST00000366496 FMN1Q68DA7 1419 aa11.08□□□□□ -0.64
NLRP3-203ENST00000366496 PHLDB1Q86UU1 1377 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms