RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 BAZ1BQ9UIG0 1483 aaKnown RBP13.02□□□□□ -0.33
CALD1-201ENST00000361675 NBR1Q14596 966 aa13.01□□□□□ -0.33
CALD1-201ENST00000361675 ITGAEP38570 1179 aa13□□□□□ -0.33
CALD1-201ENST00000361675 RBM19Q9Y4C8 960 aaKnown RBP12.99□□□□□ -0.33
CALD1-201ENST00000361675 SYNJ1O43426 1573 aa12.96□□□□□ -0.33
CALD1-201ENST00000361675 WRNQ14191 1432 aaPredicted RBP eCLIP12.96□□□□□ -0.34
CALD1-201ENST00000361675 FKBP8Q14318 412 aa12.94□□□□□ -0.34
CALD1-201ENST00000361675 IRX6P78412 446 aaPredicted RBP12.9□□□□□ -0.34
CALD1-201ENST00000361675 PAXIP1Q6ZW49 1069 aaPredicted RBP12.89□□□□□ -0.35
CALD1-201ENST00000361675 TAF7LQ5H9L4 462 aa12.88□□□□□ -0.35
CALD1-201ENST00000361675 CEP162Q5TB80 1403 aa12.87□□□□□ -0.35
CALD1-201ENST00000361675 RTL5Q5HYW3 569 aaPredicted RBP12.86□□□□□ -0.35
CALD1-201ENST00000361675 UBTFP17480 764 aaKnown RBP12.86□□□□□ -0.35
CALD1-201ENST00000361675 NCAPD3P42695 1498 aa12.85□□□□□ -0.35
CALD1-201ENST00000361675 CFAP44Q96MT7 982 aa12.84□□□□□ -0.35
CALD1-201ENST00000361675 MYT1LQ9UL68 1186 aa12.83□□□□□ -0.35
CALD1-201ENST00000361675 CDK11BP21127 795 aaKnown RBP12.83□□□□□ -0.36
CALD1-201ENST00000361675 CDK11AQ9UQ88 783 aaPredicted RBP12.83□□□□□ -0.36
CALD1-201ENST00000361675 TNIKQ9UKE5 1360 aa12.82□□□□□ -0.36
CALD1-201ENST00000361675 IL27Q8NEV9 243 aa12.81□□□□□ -0.36
CALD1-201ENST00000361675 GLIPR1L2Q4G1C9 344 aa12.81□□□□□ -0.36
CALD1-201ENST00000361675 CLSPNQ9HAW4 1339 aa12.79□□□□□ -0.36
CALD1-201ENST00000361675 MSH5O43196 834 aa12.79□□□□□ -0.36
CALD1-201ENST00000361675 FGD1P98174 961 aa12.79□□□□□ -0.36
CALD1-201ENST00000361675 HMGXB3Q12766 1538 aa12.78□□□□□ -0.36
CALD1-201ENST00000361675 EEA1Q15075 1411 aa12.77□□□□□ -0.36
CALD1-201ENST00000361675 GOLGA3Q08378 1498 aa12.76□□□□□ -0.37
CALD1-201ENST00000361675 BRD2P25440 801 aaKnown RBP12.76□□□□□ -0.37
CALD1-201ENST00000361675 RAPGEF2Q9Y4G8 1499 aa12.75□□□□□ -0.37
CALD1-201ENST00000361675 TOP2BQ02880 1626 aa12.74□□□□□ -0.37
CALD1-201ENST00000361675 CUX1P39880 1505 aa12.73□□□□□ -0.37
CALD1-201ENST00000361675 NAP1L5Q96NT1 182 aaPredicted RBP12.73□□□□□ -0.37
CALD1-201ENST00000361675 CFTRP13569 1480 aa12.71□□□□□ -0.38
CALD1-201ENST00000361675 ERICH6BQ5W0A0 696 aa12.7□□□□□ -0.38
CALD1-201ENST00000361675 CEP164Q9UPV0 1460 aa12.7□□□□□ -0.38
CALD1-201ENST00000361675 SAMD1Q6SPF0 538 aaPredicted RBP12.69□□□□□ -0.38
CALD1-201ENST00000361675 BIVM-ERCC5R4GMW8 1640 aa12.68□□□□□ -0.38
CALD1-201ENST00000361675 KIF21BO75037 1637 aa12.68□□□□□ -0.38
CALD1-201ENST00000361675 CC2D2AQ9P2K1 1620 aa12.67□□□□□ -0.38
CALD1-201ENST00000361675 VSIG10Q8N0Z9 540 aa12.66□□□□□ -0.38
CALD1-201ENST00000361675 DNAJC5BQ9UF47 199 aa12.66□□□□□ -0.38
CALD1-201ENST00000361675 CLIP1P30622 1438 aa12.64□□□□□ -0.39
CALD1-201ENST00000361675 RBM10P98175 930 aaKnown RBP12.62□□□□□ -0.39
CALD1-201ENST00000361675 HNRNPUL2Q1KMD3 747 aaKnown RBP12.61□□□□□ -0.39
CALD1-201ENST00000361675 CADPSQ9ULU8 1353 aa12.61□□□□□ -0.39
CALD1-201ENST00000361675 PRXQ9BXM0 1461 aa12.6□□□□□ -0.39
CALD1-201ENST00000361675 NESP48681 1621 aa12.57□□□□□ -0.4
CALD1-201ENST00000361675 TRIM52Q96A61 297 aa12.56□□□□□ -0.4
CALD1-201ENST00000361675 VPS8Q8N3P4 1428 aa12.55□□□□□ -0.4
CALD1-201ENST00000361675 AAMPQ13685 434 aa12.54□□□□□ -0.4
CALD1-201ENST00000361675 ZMYND15Q9H091 742 aa12.54□□□□□ -0.4
CALD1-201ENST00000361675 KIF27Q86VH2 1401 aa12.53□□□□□ -0.4
CALD1-201ENST00000361675 NOP58Q9Y2X3 529 aaKnown RBP12.53□□□□□ -0.4
CALD1-201ENST00000361675 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
CALD1-201ENST00000361675 ZNF326Q5BKZ1 582 aaKnown RBP12.51□□□□□ -0.41
CALD1-201ENST00000361675 KCNH8Q96L42 1107 aa12.51□□□□□ -0.41
CALD1-201ENST00000361675 CUX2O14529 1486 aa12.51□□□□□ -0.41
CALD1-201ENST00000361675 FGD5Q6ZNL6 1462 aa12.51□□□□□ -0.41
CALD1-201ENST00000361675 IGF1RP08069 1367 aa12.51□□□□□ -0.41
CALD1-201ENST00000361675 KANK4Q5T7N3 995 aaPredicted RBP12.5□□□□□ -0.41
CALD1-201ENST00000361675 PRDM2Q13029 1718 aa12.5□□□□□ -0.41
CALD1-201ENST00000361675 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
CALD1-201ENST00000361675 FANCD2Q9BXW9 1451 aa12.49□□□□□ -0.41
CALD1-201ENST00000361675 RAD54L2Q9Y4B4 1467 aa12.48□□□□□ -0.41
CALD1-201ENST00000361675 FANCIQ9NVI1 1328 aa12.48□□□□□ -0.41
CALD1-201ENST00000361675 FBXO3Q9UK99 471 aa12.46□□□□□ -0.41
CALD1-201ENST00000361675 LAS1LQ9Y4W2 734 aaKnown RBP12.44□□□□□ -0.42
CALD1-201ENST00000361675 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
CALD1-201ENST00000361675 NEFMP07197 916 aa12.44□□□□□ -0.42
CALD1-201ENST00000361675 ZBTB47Q9UFB7 747 aaPredicted RBP12.44□□□□□ -0.42
CALD1-201ENST00000361675 ARHGAP35Q9NRY4 1499 aa12.43□□□□□ -0.42
CALD1-201ENST00000361675 ANP32AP39687 249 aaKnown RBP12.43□□□□□ -0.42
CALD1-201ENST00000361675 TMEM132AQ24JP5 1023 aa12.43□□□□□ -0.42
CALD1-201ENST00000361675 BRPF3Q9ULD4 1205 aa12.42□□□□□ -0.42
CALD1-201ENST00000361675 CARMIL1Q5VZK9 1371 aa12.41□□□□□ -0.42
CALD1-201ENST00000361675 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
CALD1-201ENST00000361675 ARID3AQ99856 593 aa12.4□□□□□ -0.42
CALD1-201ENST00000361675 PRDM10Q9NQV6 1147 aa12.4□□□□□ -0.42
CALD1-201ENST00000361675 TOPBP1Q92547 1522 aa12.39□□□□□ -0.43
CALD1-201ENST00000361675 POLA1P09884 1462 aaPredicted RBP12.39□□□□□ -0.43
CALD1-201ENST00000361675 P3H3Q8IVL6 736 aa12.39□□□□□ -0.43
CALD1-201ENST00000361675 HSP90B1P14625 803 aaKnown RBP12.38□□□□□ -0.43
CALD1-201ENST00000361675 CCDC9Q9Y3X0 531 aaKnown RBP12.38□□□□□ -0.43
CALD1-201ENST00000361675 URB2Q14146 1524 aaKnown RBP12.37□□□□□ -0.43
CALD1-201ENST00000361675 ARID4BQ4LE39 1312 aaPredicted RBP12.37□□□□□ -0.43
CALD1-201ENST00000361675 PLCB2Q00722 1185 aa12.36□□□□□ -0.43
CALD1-201ENST00000361675 IGSF3O75054 1194 aa12.36□□□□□ -0.43
CALD1-201ENST00000361675 DNMBPQ6XZF7 1577 aa12.35□□□□□ -0.43
CALD1-201ENST00000361675 CNKSR2Q8WXI2 1034 aa12.35□□□□□ -0.43
CALD1-201ENST00000361675 CHMP4BQ9H444 224 aaKnown RBP12.35□□□□□ -0.43
CALD1-201ENST00000361675 NAP1L2Q9ULW6 460 aaPredicted RBP12.34□□□□□ -0.43
CALD1-201ENST00000361675 TDRD9Q8NDG6 1382 aaKnown RBP12.33□□□□□ -0.44
CALD1-201ENST00000361675 ABCA10Q8WWZ4 1543 aa12.32□□□□□ -0.44
CALD1-201ENST00000361675 B4GALNT3Q6L9W6 998 aa12.31□□□□□ -0.44
CALD1-201ENST00000361675 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
CALD1-201ENST00000361675 RSPH6AQ9H0K4 717 aa12.28□□□□□ -0.44
CALD1-201ENST00000361675 LAMC3Q9Y6N6 1575 aa12.27□□□□□ -0.44
CALD1-201ENST00000361675 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.27□□□□□ -0.44
CALD1-201ENST00000361675 KIF21AQ7Z4S6 1674 aa12.27□□□□□ -0.45
CALD1-201ENST00000361675 FHOD3Q2V2M9 1422 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms