RNA–Protein interactions for RNA: ENST00000361162.10

RBM39-203, Transcript of RNA binding motif protein 39, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBM39, Length 2,831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-203ENST00000361162 GAPVD1Q14C86 1478 aa18.15■□□□□ 0.5
RBM39-203ENST00000361162 TNIKQ9UKE5 1360 aa18.13■□□□□ 0.49
RBM39-203ENST00000361162 HNRNPUL2Q1KMD3 747 aaKnown RBP18.12■□□□□ 0.49
RBM39-203ENST00000361162 GRIN2BQ13224 1484 aa18.12■□□□□ 0.49
RBM39-203ENST00000361162 IGF1RP08069 1367 aa18.11■□□□□ 0.49
RBM39-203ENST00000361162 CTTNBP2Q8WZ74 1663 aa18.11■□□□□ 0.49
RBM39-203ENST00000361162 RAPGEF2Q9Y4G8 1499 aa18.1■□□□□ 0.49
RBM39-203ENST00000361162 MAGI1Q96QZ7 1491 aaPredicted RBP18.09■□□□□ 0.49
RBM39-203ENST00000361162 FHAD1B1AJZ9 1412 aa18.04■□□□□ 0.48
RBM39-203ENST00000361162 SUPT16HQ9Y5B9 1047 aaKnown RBP18.04■□□□□ 0.48
RBM39-203ENST00000361162 CARMIL1Q5VZK9 1371 aa18■□□□□ 0.47
RBM39-203ENST00000361162 UBTFP17480 764 aaKnown RBP17.99■□□□□ 0.47
RBM39-203ENST00000361162 EFCAB5A4FU69 1503 aa17.98■□□□□ 0.47
RBM39-203ENST00000361162 CEP162Q5TB80 1403 aa17.97■□□□□ 0.47
RBM39-203ENST00000361162 TSHZ2Q9NRE2 1034 aa17.97■□□□□ 0.47
RBM39-203ENST00000361162 BCL11AQ9H165 835 aa17.96■□□□□ 0.47
RBM39-203ENST00000361162 ZNF608Q9ULD9 1512 aaPredicted RBP17.95■□□□□ 0.46
RBM39-203ENST00000361162 ANP32EQ9BTT0 268 aa17.94■□□□□ 0.46
RBM39-203ENST00000361162 SYNJ2O15056 1496 aa17.93■□□□□ 0.46
RBM39-203ENST00000361162 SAMD9Q5K651 1589 aa17.9■□□□□ 0.46
RBM39-203ENST00000361162 SNAPC4Q5SXM2 1469 aa17.9■□□□□ 0.46
RBM39-203ENST00000361162 TDRD9Q8NDG6 1382 aaKnown RBP17.89■□□□□ 0.45
RBM39-203ENST00000361162 AQRO60306 1485 aaKnown RBP eCLIP17.88■□□□□ 0.452e-10■■■■□ 23
RBM39-203ENST00000361162 GRIN2AQ12879 1464 aa17.88■□□□□ 0.45
RBM39-203ENST00000361162 BCANQ96GW7 911 aa17.85■□□□□ 0.45
RBM39-203ENST00000361162 NUP160Q12769 1436 aa17.84■□□□□ 0.45
RBM39-203ENST00000361162 UGGT2Q9NYU1 1516 aa17.84■□□□□ 0.45
RBM39-203ENST00000361162 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
RBM39-203ENST00000361162 KIAA0586Q9BVV6 1533 aa17.8■□□□□ 0.44
RBM39-203ENST00000361162 RANGAP1P46060 587 aaPredicted RBP17.79■□□□□ 0.44
RBM39-203ENST00000361162 CHD1O14646 1710 aa17.79■□□□□ 0.44
RBM39-203ENST00000361162 CLIP1P30622 1438 aa17.78■□□□□ 0.44
RBM39-203ENST00000361162 SHROOM2Q13796 1616 aa17.78■□□□□ 0.44
RBM39-203ENST00000361162 CEP170Q5SW79 1584 aa17.77■□□□□ 0.44
RBM39-203ENST00000361162 MAP3K1Q13233 1512 aa17.76■□□□□ 0.43
RBM39-203ENST00000361162 KCNH8Q96L42 1107 aa17.75■□□□□ 0.43
RBM39-203ENST00000361162 ARAP1Q96P48 1450 aa17.74■□□□□ 0.43
RBM39-203ENST00000361162 ARHGAP35Q9NRY4 1499 aa17.74■□□□□ 0.43
RBM39-203ENST00000361162 VPS8Q8N3P4 1428 aa17.73■□□□□ 0.43
RBM39-203ENST00000361162 CLASP1Q7Z460 1538 aa17.71■□□□□ 0.43
RBM39-203ENST00000361162 KIAA0556O60303 1618 aa17.68■□□□□ 0.42
RBM39-203ENST00000361162 CLSPNQ9HAW4 1339 aa17.68■□□□□ 0.42
RBM39-203ENST00000361162 CFAP43Q8NDM7 1665 aa17.67■□□□□ 0.42
RBM39-203ENST00000361162 FYCO1Q9BQS8 1478 aa17.64■□□□□ 0.41
RBM39-203ENST00000361162 APLP2Q06481 763 aa17.64■□□□□ 0.41
RBM39-203ENST00000361162 FKBP8Q14318 412 aa17.64■□□□□ 0.41
RBM39-203ENST00000361162 FMN1Q68DA7 1419 aa17.62■□□□□ 0.41
RBM39-203ENST00000361162 DISP1Q96F81 1524 aa17.59■□□□□ 0.41
RBM39-203ENST00000361162 CASKIN1Q8WXD9 1431 aa17.57■□□□□ 0.4
RBM39-203ENST00000361162 ITGAEP38570 1179 aa17.57■□□□□ 0.4
RBM39-203ENST00000361162 HECW1Q76N89 1606 aa17.56■□□□□ 0.4
RBM39-203ENST00000361162 RBM19Q9Y4C8 960 aaKnown RBP17.56■□□□□ 0.4
RBM39-203ENST00000361162 PCF11O94913 1555 aaKnown RBP17.56■□□□□ 0.4
RBM39-203ENST00000361162 CCDC18Q5T9S5 1454 aa17.52■□□□□ 0.4
RBM39-203ENST00000361162 CARMIL2Q6F5E8 1435 aa17.52■□□□□ 0.39
RBM39-203ENST00000361162 TIAM1Q13009 1591 aa17.52■□□□□ 0.39
RBM39-203ENST00000361162 DHX57Q6P158 1386 aaKnown RBP17.51■□□□□ 0.39
RBM39-203ENST00000361162 CHMP7Q8WUX9 453 aaPredicted RBP17.51■□□□□ 0.39
RBM39-203ENST00000361162 RAPGEF6Q8TEU7 1601 aa17.48■□□□□ 0.39
RBM39-203ENST00000361162 ABCA8O94911 1581 aa17.46■□□□□ 0.39
RBM39-203ENST00000361162 LRRIQ1Q96JM4 1722 aa17.46■□□□□ 0.39
RBM39-203ENST00000361162 DDX10Q13206 875 aaKnown RBP17.43■□□□□ 0.38
RBM39-203ENST00000361162 FHOD3Q2V2M9 1422 aa17.43■□□□□ 0.38
RBM39-203ENST00000361162 MSH5O43196 834 aa17.43■□□□□ 0.38
RBM39-203ENST00000361162 TRIM52Q96A61 297 aa17.43■□□□□ 0.38
RBM39-203ENST00000361162 ADCY10Q96PN6 1610 aa17.4■□□□□ 0.38
RBM39-203ENST00000361162 UHRF1BP1LA0JNW5 1464 aa17.4■□□□□ 0.38
RBM39-203ENST00000361162 EHBP1L1Q8N3D4 1523 aa17.4■□□□□ 0.38
RBM39-203ENST00000361162 NEFLP07196 543 aa17.39■□□□□ 0.37
RBM39-203ENST00000361162 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
RBM39-203ENST00000361162 HIRIP3Q9BW71 556 aaPredicted RBP17.37■□□□□ 0.37
RBM39-203ENST00000361162 ARHGEF11O15085 1522 aa17.35■□□□□ 0.37
RBM39-203ENST00000361162 LRRC9Q6ZRR7 1453 aa17.34■□□□□ 0.37
RBM39-203ENST00000361162 PRG4Q92954 1404 aaPredicted RBP17.34■□□□□ 0.37
RBM39-203ENST00000361162 JPH4Q96JJ6 628 aa17.33■□□□□ 0.36
RBM39-203ENST00000361162 EPRSP07814 1512 aaKnown RBP17.32■□□□□ 0.36
RBM39-203ENST00000361162 SUPT6HQ7KZ85 1726 aaKnown RBP17.32■□□□□ 0.36
RBM39-203ENST00000361162 ABCC2Q92887 1545 aa17.32■□□□□ 0.36
RBM39-203ENST00000361162 NUP153P49790 1475 aaKnown RBP17.31■□□□□ 0.36
RBM39-203ENST00000361162 IRX6P78412 446 aaPredicted RBP17.29■□□□□ 0.36
RBM39-203ENST00000361162 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.25■□□□□ 0.35
RBM39-203ENST00000361162 ERICH6Q7L0X2 663 aa17.25■□□□□ 0.35
RBM39-203ENST00000361162 RRBP1Q9P2E9 1410 aaKnown RBP17.24■□□□□ 0.35
RBM39-203ENST00000361162 SIN3AQ96ST3 1273 aa17.24■□□□□ 0.35
RBM39-203ENST00000361162 ITSN2Q9NZM3 1697 aa17.23■□□□□ 0.35
RBM39-203ENST00000361162 UACAQ9BZF9 1416 aa17.23■□□□□ 0.35
RBM39-203ENST00000361162 ERCC6L2Q5T890 1561 aa17.22■□□□□ 0.35
RBM39-203ENST00000361162 KDM5BQ9UGL1 1544 aa17.21■□□□□ 0.35
RBM39-203ENST00000361162 PTPRGP23470 1445 aa17.21■□□□□ 0.35
RBM39-203ENST00000361162 FBLN2P98095 1184 aa17.21■□□□□ 0.35
RBM39-203ENST00000361162 OSCARQ8IYS5 282 aa17.19■□□□□ 0.34
RBM39-203ENST00000361162 MAGI3Q5TCQ9 1506 aa17.18■□□□□ 0.34
RBM39-203ENST00000361162 ZCCHC11Q5TAX3 1644 aaKnown RBP17.17■□□□□ 0.34
RBM39-203ENST00000361162 PLB1Q6P1J6 1458 aa17.17■□□□□ 0.34
RBM39-203ENST00000361162 KIF14Q15058 1648 aa17.17■□□□□ 0.34
RBM39-203ENST00000361162 PPP1R15AO75807 674 aaPredicted RBP17.16■□□□□ 0.34
RBM39-203ENST00000361162 TROQ12816 1431 aaPredicted RBP17.16■□□□□ 0.34
RBM39-203ENST00000361162 TCOF1Q13428 1488 aaKnown RBP17.15■□□□□ 0.34
RBM39-203ENST00000361162 PRKCSHP14314 528 aaPredicted RBP17.14■□□□□ 0.33
RBM39-203ENST00000361162 CDK13Q14004 1512 aaKnown RBP17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms