RNA–Protein interactions for RNA: ENST00000360752.4

RDH16-201, Transcript of retinol dehydrogenase 16, humanhuman

TSL 1 (best)

Gene RDH16, Length 3,198 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH16-201ENST00000360752 IRX6P78412 446 aaPredicted RBP13.77□□□□□ -0.21
RDH16-201ENST00000360752 CUX2O14529 1486 aa13.76□□□□□ -0.21
RDH16-201ENST00000360752 ERICH3Q5RHP9 1530 aa13.76□□□□□ -0.21
RDH16-201ENST00000360752 ANP32CO43423 234 aa13.74□□□□□ -0.21
RDH16-201ENST00000360752 PHLDB1Q86UU1 1377 aa13.74□□□□□ -0.21
RDH16-201ENST00000360752 RBM19Q9Y4C8 960 aaKnown RBP13.73□□□□□ -0.21
RDH16-201ENST00000360752 CNGB1Q14028 1251 aaPredicted RBP13.73□□□□□ -0.21
RDH16-201ENST00000360752 SETD5Q9C0A6 1442 aa13.73□□□□□ -0.21
RDH16-201ENST00000360752 WDR97A6NE52 1622 aa13.72□□□□□ -0.21
RDH16-201ENST00000360752 MAPKBP1O60336 1514 aa13.7□□□□□ -0.22
RDH16-201ENST00000360752 BIVM-ERCC5R4GMW8 1640 aa13.69□□□□□ -0.22
RDH16-201ENST00000360752 CARMIL1Q5VZK9 1371 aa13.68□□□□□ -0.22
RDH16-201ENST00000360752 IGF1RP08069 1367 aa13.67□□□□□ -0.22
RDH16-201ENST00000360752 ARID3CA6NKF2 412 aa13.67□□□□□ -0.22
RDH16-201ENST00000360752 ERICH6Q7L0X2 663 aa13.67□□□□□ -0.22
RDH16-201ENST00000360752 TONSLQ96HA7 1378 aa13.66□□□□□ -0.22
RDH16-201ENST00000360752 FHOD3Q2V2M9 1422 aa13.66□□□□□ -0.22
RDH16-201ENST00000360752 HNRNPUQ00839 825 aaKnown RBP eCLIP13.65□□□□□ -0.22
RDH16-201ENST00000360752 MSH5O43196 834 aa13.65□□□□□ -0.22
RDH16-201ENST00000360752 ANO8Q9HCE9 1232 aaPredicted RBP13.65□□□□□ -0.23
RDH16-201ENST00000360752 PPP1R15AO75807 674 aaPredicted RBP13.64□□□□□ -0.23
RDH16-201ENST00000360752 CHIC2Q9UKJ5 165 aa13.64□□□□□ -0.23
RDH16-201ENST00000360752 LRRC9Q6ZRR7 1453 aa13.63□□□□□ -0.23
RDH16-201ENST00000360752 TIAM1Q13009 1591 aa13.62□□□□□ -0.23
RDH16-201ENST00000360752 SENP3-EIF4A1A0A087X0R7 540 aa13.6□□□□□ -0.23
RDH16-201ENST00000360752 RRP7BPQ9NSQ0 103 aa13.59□□□□□ -0.23
RDH16-201ENST00000360752 CFTRP13569 1480 aa13.58□□□□□ -0.24
RDH16-201ENST00000360752 FGD5Q6ZNL6 1462 aa13.57□□□□□ -0.24
RDH16-201ENST00000360752 NCAPD3P42695 1498 aa13.56□□□□□ -0.24
RDH16-201ENST00000360752 MTUS2Q5JR59 1369 aa13.56□□□□□ -0.24
RDH16-201ENST00000360752 POLR3GLQ9BT43 218 aa13.55□□□□□ -0.24
RDH16-201ENST00000360752 FHAD1B1AJZ9 1412 aa13.54□□□□□ -0.24
RDH16-201ENST00000360752 FAM9BQ8IZU0 186 aa13.54□□□□□ -0.24
RDH16-201ENST00000360752 CCDC136Q96JN2 1154 aa13.54□□□□□ -0.24
RDH16-201ENST00000360752 PCF11O94913 1555 aaKnown RBP13.54□□□□□ -0.24
RDH16-201ENST00000360752 FOXD1Q16676 465 aa13.53□□□□□ -0.24
RDH16-201ENST00000360752 RAD54L2Q9Y4B4 1467 aa13.53□□□□□ -0.24
RDH16-201ENST00000360752 DEKP35659 375 aaKnown RBP13.52□□□□□ -0.24
RDH16-201ENST00000360752 CCER2I3L3R5 266 aa13.52□□□□□ -0.25
RDH16-201ENST00000360752 CADPSQ9ULU8 1353 aa13.49□□□□□ -0.25
RDH16-201ENST00000360752 HMGXB3Q12766 1538 aa13.49□□□□□ -0.25
RDH16-201ENST00000360752 CCDC18Q5T9S5 1454 aa13.48□□□□□ -0.25
RDH16-201ENST00000360752 CDK11AQ9UQ88 783 aaPredicted RBP13.48□□□□□ -0.25
RDH16-201ENST00000360752 HSPA5P11021 654 aaKnown RBP13.47□□□□□ -0.25
RDH16-201ENST00000360752 CCDC184Q52MB2 194 aa13.47□□□□□ -0.25
RDH16-201ENST00000360752 NBR1Q14596 966 aa13.47□□□□□ -0.25
RDH16-201ENST00000360752 SALL2Q9Y467 1007 aaPredicted RBP13.47□□□□□ -0.25
RDH16-201ENST00000360752 ZNF326Q5BKZ1 582 aaKnown RBP13.45□□□□□ -0.26
RDH16-201ENST00000360752 TIMELESSQ9UNS1 1208 aa13.45□□□□□ -0.26
RDH16-201ENST00000360752 FGD6Q6ZV73 1430 aa13.45□□□□□ -0.26
RDH16-201ENST00000360752 PTPRKQ15262 1439 aa13.44□□□□□ -0.26
RDH16-201ENST00000360752 B4GALNT3Q6L9W6 998 aa13.44□□□□□ -0.26
RDH16-201ENST00000360752 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
RDH16-201ENST00000360752 TDRD9Q8NDG6 1382 aaKnown RBP13.43□□□□□ -0.26
RDH16-201ENST00000360752 MRS2Q9HD23 443 aa13.42□□□□□ -0.26
RDH16-201ENST00000360752 WASHC2AQ641Q2 1341 aa13.42□□□□□ -0.26
RDH16-201ENST00000360752 FANCD2Q9BXW9 1451 aa13.41□□□□□ -0.26
RDH16-201ENST00000360752 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.4□□□□□ -0.26
RDH16-201ENST00000360752 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.26
RDH16-201ENST00000360752 EIF4G2P78344 907 aaKnown RBP eCLIP13.4□□□□□ -0.26
RDH16-201ENST00000360752 MAP3K1Q13233 1512 aa13.39□□□□□ -0.27
RDH16-201ENST00000360752 CASKIN1Q8WXD9 1431 aa13.38□□□□□ -0.27
RDH16-201ENST00000360752 NESP48681 1621 aa13.38□□□□□ -0.27
RDH16-201ENST00000360752 FYCO1Q9BQS8 1478 aa13.37□□□□□ -0.27
RDH16-201ENST00000360752 UACAQ9BZF9 1416 aa13.37□□□□□ -0.27
RDH16-201ENST00000360752 L3MBTL2Q969R5 705 aa13.37□□□□□ -0.27
RDH16-201ENST00000360752 CFAP43Q8NDM7 1665 aa13.36□□□□□ -0.27
RDH16-201ENST00000360752 C11orf95C9JLR9 678 aaPredicted RBP13.36□□□□□ -0.27
RDH16-201ENST00000360752 NAIPQ13075 1403 aa13.35□□□□□ -0.27
RDH16-201ENST00000360752 FMN1Q68DA7 1419 aa13.35□□□□□ -0.27
RDH16-201ENST00000360752 NCOA2Q15596 1464 aa13.35□□□□□ -0.27
RDH16-201ENST00000360752 POLA1P09884 1462 aaPredicted RBP13.34□□□□□ -0.27
RDH16-201ENST00000360752 HFM1A2PYH4 1435 aa13.34□□□□□ -0.27
RDH16-201ENST00000360752 MPHOSPH9Q99550 1183 aa13.32□□□□□ -0.28
RDH16-201ENST00000360752 MYOM3Q5VTT5 1437 aa13.31□□□□□ -0.28
RDH16-201ENST00000360752 PTPN23Q9H3S7 1636 aa13.31□□□□□ -0.28
RDH16-201ENST00000360752 IL27Q8NEV9 243 aa13.3□□□□□ -0.28
RDH16-201ENST00000360752 PRKRIP1Q9H875 184 aaPredicted RBP13.3□□□□□ -0.28
RDH16-201ENST00000360752 PPP4R2Q9NY27 417 aa13.3□□□□□ -0.28
RDH16-201ENST00000360752 FANCIQ9NVI1 1328 aa13.3□□□□□ -0.28
RDH16-201ENST00000360752 SLC4A1APQ9BWU0 796 aaKnown RBP13.29□□□□□ -0.28
RDH16-201ENST00000360752 ZNF777Q9ULD5 760 aaPredicted RBP13.29□□□□□ -0.28
RDH16-201ENST00000360752 TOPBP1Q92547 1522 aa13.29□□□□□ -0.28
RDH16-201ENST00000360752 NBPF8Q3BBV2 869 aa13.28□□□□□ -0.28
RDH16-201ENST00000360752 ZNF644Q9H582 1327 aaPredicted RBP13.27□□□□□ -0.29
RDH16-201ENST00000360752 SNAPC4Q5SXM2 1469 aa13.26□□□□□ -0.29
RDH16-201ENST00000360752 EFCAB5A4FU69 1503 aa13.26□□□□□ -0.29
RDH16-201ENST00000360752 DNAJC5BQ9UF47 199 aa13.25□□□□□ -0.29
RDH16-201ENST00000360752 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.25□□□□□ -0.29
RDH16-201ENST00000360752 ABCA10Q8WWZ4 1543 aa13.24□□□□□ -0.29
RDH16-201ENST00000360752 CNTLNQ9NXG0 1405 aa13.24□□□□□ -0.29
RDH16-201ENST00000360752 PAK3O75914 559 aaPredicted RBP13.24□□□□□ -0.29
RDH16-201ENST00000360752 CCDC7Q96M83 1385 aa13.23□□□□□ -0.29
RDH16-201ENST00000360752 CC2D2AQ9P2K1 1620 aa13.23□□□□□ -0.29
RDH16-201ENST00000360752 KIF7Q2M1P5 1343 aa13.22□□□□□ -0.29
RDH16-201ENST00000360752 NPM2Q86SE8 214 aaKnown RBP13.22□□□□□ -0.29
RDH16-201ENST00000360752 DNMBPQ6XZF7 1577 aa13.21□□□□□ -0.29
RDH16-201ENST00000360752 PRDM2Q13029 1718 aa13.21□□□□□ -0.29
RDH16-201ENST00000360752 AKNAQ7Z591 1439 aa13.21□□□□□ -0.3
RDH16-201ENST00000360752 KDM6BO15054 1643 aa13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms