RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 SOGA1O94964 1423 aa6.74□□□□□ -1.33
PTPN22-201ENST00000359785 CCDC18Q5T9S5 1454 aa6.74□□□□□ -1.33
PTPN22-201ENST00000359785 ERICH6BQ5W0A0 696 aa6.74□□□□□ -1.33
PTPN22-201ENST00000359785 TCOF1Q13428 1488 aaKnown RBP6.74□□□□□ -1.33
PTPN22-201ENST00000359785 CUX1P39880 1505 aa6.73□□□□□ -1.33
PTPN22-201ENST00000359785 ADCY10Q96PN6 1610 aa6.73□□□□□ -1.33
PTPN22-201ENST00000359785 CFTRP13569 1480 aa6.72□□□□□ -1.33
PTPN22-201ENST00000359785 ADGBQ8N7X0 1667 aa6.72□□□□□ -1.33
PTPN22-201ENST00000359785 INSRP06213 1382 aa6.7□□□□□ -1.34
PTPN22-201ENST00000359785 GTF3C3Q9Y5Q9 886 aa6.7□□□□□ -1.34
PTPN22-201ENST00000359785 ARHGAP35Q9NRY4 1499 aa6.7□□□□□ -1.34
PTPN22-201ENST00000359785 RAPGEF2Q9Y4G8 1499 aa6.7□□□□□ -1.34
PTPN22-201ENST00000359785 PTPN23Q9H3S7 1636 aa6.7□□□□□ -1.34
PTPN22-201ENST00000359785 RUSC2Q8N2Y8 1516 aa6.69□□□□□ -1.34
PTPN22-201ENST00000359785 ANP32EQ9BTT0 268 aa6.69□□□□□ -1.34
PTPN22-201ENST00000359785 PCF11O94913 1555 aaKnown RBP6.68□□□□□ -1.34
PTPN22-201ENST00000359785 FANCIQ9NVI1 1328 aa6.68□□□□□ -1.34
PTPN22-201ENST00000359785 SENP3Q9H4L4 574 aaPredicted RBP6.68□□□□□ -1.34
PTPN22-201ENST00000359785 SNAPC4Q5SXM2 1469 aa6.67□□□□□ -1.34
PTPN22-201ENST00000359785 CCDC144AA2RUR9 1427 aa6.67□□□□□ -1.34
PTPN22-201ENST00000359785 FHAD1B1AJZ9 1412 aa6.67□□□□□ -1.34
PTPN22-201ENST00000359785 PHF23Q9BUL5 403 aaPredicted RBP6.66□□□□□ -1.34
PTPN22-201ENST00000359785 LRRC9Q6ZRR7 1453 aa6.66□□□□□ -1.34
PTPN22-201ENST00000359785 SUPT6HQ7KZ85 1726 aaKnown RBP6.66□□□□□ -1.34
PTPN22-201ENST00000359785 DCAF8L2P0C7V8 631 aa6.66□□□□□ -1.34
PTPN22-201ENST00000359785 KDM5DQ9BY66 1539 aa6.66□□□□□ -1.34
PTPN22-201ENST00000359785 FGD5Q6ZNL6 1462 aa6.65□□□□□ -1.34
PTPN22-201ENST00000359785 CCER2I3L3R5 266 aa6.65□□□□□ -1.34
PTPN22-201ENST00000359785 GAPVD1Q14C86 1478 aa6.65□□□□□ -1.34
PTPN22-201ENST00000359785 EHBP1L1Q8N3D4 1523 aa6.65□□□□□ -1.35
PTPN22-201ENST00000359785 MBD5Q9P267 1494 aa6.64□□□□□ -1.35
PTPN22-201ENST00000359785 DNMBPQ6XZF7 1577 aa6.64□□□□□ -1.35
PTPN22-201ENST00000359785 KIF14Q15058 1648 aa6.64□□□□□ -1.35
PTPN22-201ENST00000359785 NEURL4Q96JN8 1562 aa6.64□□□□□ -1.35
PTPN22-201ENST00000359785 UGGT2Q9NYU1 1516 aa6.63□□□□□ -1.35
PTPN22-201ENST00000359785 CSRNP3Q8WYN3 585 aa6.63□□□□□ -1.35
PTPN22-201ENST00000359785 ABCA10Q8WWZ4 1543 aa6.63□□□□□ -1.35
PTPN22-201ENST00000359785 SUPT16HQ9Y5B9 1047 aaKnown RBP6.62□□□□□ -1.35
PTPN22-201ENST00000359785 CASKIN1Q8WXD9 1431 aa6.62□□□□□ -1.35
PTPN22-201ENST00000359785 TEX14Q8IWB6 1497 aa6.61□□□□□ -1.35
PTPN22-201ENST00000359785 HFM1A2PYH4 1435 aa6.61□□□□□ -1.35
PTPN22-201ENST00000359785 IQGAP2Q13576 1575 aa6.61□□□□□ -1.35
PTPN22-201ENST00000359785 DNMT1P26358 1616 aaKnown RBP6.6□□□□□ -1.35
PTPN22-201ENST00000359785 TSHZ2Q9NRE2 1034 aa6.6□□□□□ -1.35
PTPN22-201ENST00000359785 GRIN2BQ13224 1484 aa6.6□□□□□ -1.35
PTPN22-201ENST00000359785 CLASP1Q7Z460 1538 aa6.6□□□□□ -1.35
PTPN22-201ENST00000359785 NESP48681 1621 aa6.6□□□□□ -1.35
PTPN22-201ENST00000359785 CEP170Q5SW79 1584 aa6.59□□□□□ -1.35
PTPN22-201ENST00000359785 ITSN2Q9NZM3 1697 aa6.59□□□□□ -1.35
PTPN22-201ENST00000359785 CCNB3Q8WWL7 1395 aa6.59□□□□□ -1.36
PTPN22-201ENST00000359785 CADPSQ9ULU8 1353 aa6.59□□□□□ -1.36
PTPN22-201ENST00000359785 APLP2Q06481 763 aa6.58□□□□□ -1.36
PTPN22-201ENST00000359785 SHROOM2Q13796 1616 aa6.58□□□□□ -1.36
PTPN22-201ENST00000359785 RNF17Q9BXT8 1623 aaKnown RBP6.58□□□□□ -1.36
PTPN22-201ENST00000359785 PBRM1Q86U86 1689 aa6.58□□□□□ -1.36
PTPN22-201ENST00000359785 KIF27Q86VH2 1401 aa6.57□□□□□ -1.36
PTPN22-201ENST00000359785 WDR62O43379 1518 aa6.57□□□□□ -1.36
PTPN22-201ENST00000359785 DENND4BO75064 1496 aaPredicted RBP6.57□□□□□ -1.36
PTPN22-201ENST00000359785 RNF123Q5XPI4 1314 aa6.57□□□□□ -1.36
PTPN22-201ENST00000359785 ARHGEF12Q9NZN5 1544 aa6.57□□□□□ -1.36
PTPN22-201ENST00000359785 UACAQ9BZF9 1416 aa6.57□□□□□ -1.36
PTPN22-201ENST00000359785 SETD5Q9C0A6 1442 aa6.56□□□□□ -1.36
PTPN22-201ENST00000359785 KDM5CP41229 1560 aa6.56□□□□□ -1.36
PTPN22-201ENST00000359785 ADGRL2O95490 1459 aa6.54□□□□□ -1.36
PTPN22-201ENST00000359785 PPP1R15AO75807 674 aaPredicted RBP6.54□□□□□ -1.36
PTPN22-201ENST00000359785 CCER1Q8TC90 406 aaPredicted RBP6.54□□□□□ -1.36
PTPN22-201ENST00000359785 SPATA31E1Q6ZUB1 1445 aa6.53□□□□□ -1.36
PTPN22-201ENST00000359785 PDS5BQ9NTI5 1447 aa6.53□□□□□ -1.36
PTPN22-201ENST00000359785 MAST1Q9Y2H9 1570 aa6.53□□□□□ -1.36
PTPN22-201ENST00000359785 TARBP1Q13395 1621 aaKnown RBP6.52□□□□□ -1.36
PTPN22-201ENST00000359785 KIAA1210Q9ULL0 1709 aa6.52□□□□□ -1.37
PTPN22-201ENST00000359785 MIER1Q8N108 512 aa6.52□□□□□ -1.37
PTPN22-201ENST00000359785 PLXNC1O60486 1568 aa6.52□□□□□ -1.37
PTPN22-201ENST00000359785 MIA2Q96PC5 1412 aa6.52□□□□□ -1.37
PTPN22-201ENST00000359785 BCL11AQ9H165 835 aa6.52□□□□□ -1.37
PTPN22-201ENST00000359785 NCOA1Q15788 1441 aa6.51□□□□□ -1.37
PTPN22-201ENST00000359785 ROCK1Q13464 1354 aa6.51□□□□□ -1.37
PTPN22-201ENST00000359785 UHRF1BP1Q6BDS2 1440 aa6.51□□□□□ -1.37
PTPN22-201ENST00000359785 SHANK2Q9UPX8 1470 aa6.5□□□□□ -1.37
PTPN22-201ENST00000359785 PPRC1Q5VV67 1664 aaKnown RBP6.5□□□□□ -1.37
PTPN22-201ENST00000359785 KTN1Q86UP2 1357 aaKnown RBP6.5□□□□□ -1.37
PTPN22-201ENST00000359785 MRC2Q9UBG0 1479 aa6.49□□□□□ -1.37
PTPN22-201ENST00000359785 UNC13BO14795 1591 aa6.49□□□□□ -1.37
PTPN22-201ENST00000359785 FANCD2Q9BXW9 1451 aa6.49□□□□□ -1.37
PTPN22-201ENST00000359785 MSH5O43196 834 aa6.49□□□□□ -1.37
PTPN22-201ENST00000359785 PABPN1Q86U42 306 aaKnown RBP eCLIP6.49□□□□□ -1.37
PTPN22-201ENST00000359785 YEATS2Q9ULM3 1422 aa6.49□□□□□ -1.37
PTPN22-201ENST00000359785 TOPBP1Q92547 1522 aa6.48□□□□□ -1.37
PTPN22-201ENST00000359785 SCAPERQ9BY12 1400 aa6.48□□□□□ -1.37
PTPN22-201ENST00000359785 ABCC10Q5T3U5 1492 aa6.48□□□□□ -1.37
PTPN22-201ENST00000359785 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.48□□□□□ -1.37
PTPN22-201ENST00000359785 ARHGEF5Q12774 1597 aa6.48□□□□□ -1.37
PTPN22-201ENST00000359785 CDC42BPAQ5VT25 1732 aa6.47□□□□□ -1.37
PTPN22-201ENST00000359785 PLEKHH2Q8IVE3 1493 aa6.47□□□□□ -1.37
PTPN22-201ENST00000359785 ERICH6Q7L0X2 663 aa6.47□□□□□ -1.37
PTPN22-201ENST00000359785 ADAMTS12P58397 1594 aa6.47□□□□□ -1.37
PTPN22-201ENST00000359785 ARID4BQ4LE39 1312 aaPredicted RBP6.47□□□□□ -1.37
PTPN22-201ENST00000359785 TRPM1Q7Z4N2 1603 aa6.47□□□□□ -1.37
PTPN22-201ENST00000359785 RAB3GAP2Q9H2M9 1393 aa6.47□□□□□ -1.37
PTPN22-201ENST00000359785 FGD6Q6ZV73 1430 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms