RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 BCL11AQ9H165 835 aa14.06□□□□□ -0.16
TRAPPC2-201ENST00000359680 TIAM1Q13009 1591 aa14.05□□□□□ -0.16
TRAPPC2-201ENST00000359680 RBM19Q9Y4C8 960 aaKnown RBP14.04□□□□□ -0.16
TRAPPC2-201ENST00000359680 SIN3AQ96ST3 1273 aa14.03□□□□□ -0.16
TRAPPC2-201ENST00000359680 MAP3K1Q13233 1512 aa14.03□□□□□ -0.16
TRAPPC2-201ENST00000359680 PPP1R15AO75807 674 aaPredicted RBP14.03□□□□□ -0.16
TRAPPC2-201ENST00000359680 CCER2I3L3R5 266 aa14.02□□□□□ -0.16
TRAPPC2-201ENST00000359680 ANP32CO43423 234 aa14.02□□□□□ -0.16
TRAPPC2-201ENST00000359680 TIMELESSQ9UNS1 1208 aa14.01□□□□□ -0.17
TRAPPC2-201ENST00000359680 TRIM52Q96A61 297 aa14□□□□□ -0.17
TRAPPC2-201ENST00000359680 FAM50AQ14320 339 aaKnown RBP14□□□□□ -0.17
TRAPPC2-201ENST00000359680 LRRC9Q6ZRR7 1453 aa13.99□□□□□ -0.17
TRAPPC2-201ENST00000359680 PHLDB1Q86UU1 1377 aa13.97□□□□□ -0.17
TRAPPC2-201ENST00000359680 HIRIP3Q9BW71 556 aaPredicted RBP13.96□□□□□ -0.17
TRAPPC2-201ENST00000359680 HMGXB3Q12766 1538 aa13.94□□□□□ -0.18
TRAPPC2-201ENST00000359680 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
TRAPPC2-201ENST00000359680 CFAP43Q8NDM7 1665 aa13.92□□□□□ -0.18
TRAPPC2-201ENST00000359680 IGF1RP08069 1367 aa13.91□□□□□ -0.18
TRAPPC2-201ENST00000359680 CFTRP13569 1480 aa13.9□□□□□ -0.18
TRAPPC2-201ENST00000359680 NCAPD3P42695 1498 aa13.9□□□□□ -0.18
TRAPPC2-201ENST00000359680 TONSLQ96HA7 1378 aa13.89□□□□□ -0.19
TRAPPC2-201ENST00000359680 CARMIL1Q5VZK9 1371 aa13.88□□□□□ -0.19
TRAPPC2-201ENST00000359680 ATP1B4Q9UN42 357 aaPredicted RBP13.88□□□□□ -0.19
TRAPPC2-201ENST00000359680 PLPPR3Q6T4P5 718 aa13.88□□□□□ -0.19
TRAPPC2-201ENST00000359680 PCF11O94913 1555 aaKnown RBP13.87□□□□□ -0.19
TRAPPC2-201ENST00000359680 CDK11AQ9UQ88 783 aaPredicted RBP13.85□□□□□ -0.19
TRAPPC2-201ENST00000359680 ERICH6Q7L0X2 663 aa13.84□□□□□ -0.19
TRAPPC2-201ENST00000359680 PRDM2Q13029 1718 aa13.84□□□□□ -0.19
TRAPPC2-201ENST00000359680 MSH5O43196 834 aa13.84□□□□□ -0.19
TRAPPC2-201ENST00000359680 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAPPC2-201ENST00000359680 FANCIQ9NVI1 1328 aa13.83□□□□□ -0.2
TRAPPC2-201ENST00000359680 HNRNPUQ00839 825 aaKnown RBP eCLIP13.83□□□□□ -0.2
TRAPPC2-201ENST00000359680 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
TRAPPC2-201ENST00000359680 FYCO1Q9BQS8 1478 aa13.8□□□□□ -0.2
TRAPPC2-201ENST00000359680 CCDC18Q5T9S5 1454 aa13.8□□□□□ -0.2
TRAPPC2-201ENST00000359680 IRX6P78412 446 aaPredicted RBP13.78□□□□□ -0.2
TRAPPC2-201ENST00000359680 FGD5Q6ZNL6 1462 aa13.78□□□□□ -0.2
TRAPPC2-201ENST00000359680 FHOD3Q2V2M9 1422 aa13.78□□□□□ -0.2
TRAPPC2-201ENST00000359680 UACAQ9BZF9 1416 aa13.77□□□□□ -0.2
TRAPPC2-201ENST00000359680 FGD6Q6ZV73 1430 aa13.77□□□□□ -0.21
TRAPPC2-201ENST00000359680 CASKIN1Q8WXD9 1431 aa13.76□□□□□ -0.21
TRAPPC2-201ENST00000359680 ERICH6BQ5W0A0 696 aa13.76□□□□□ -0.21
TRAPPC2-201ENST00000359680 EFCAB5A4FU69 1503 aa13.75□□□□□ -0.21
TRAPPC2-201ENST00000359680 HFM1A2PYH4 1435 aa13.74□□□□□ -0.21
TRAPPC2-201ENST00000359680 AQRO60306 1485 aaKnown RBP eCLIP13.74□□□□□ -0.21
TRAPPC2-201ENST00000359680 PTPN23Q9H3S7 1636 aa13.73□□□□□ -0.21
TRAPPC2-201ENST00000359680 PPP4R2Q9NY27 417 aa13.72□□□□□ -0.21
TRAPPC2-201ENST00000359680 MTUS2Q5JR59 1369 aa13.71□□□□□ -0.22
TRAPPC2-201ENST00000359680 MYT1LQ9UL68 1186 aa13.7□□□□□ -0.22
TRAPPC2-201ENST00000359680 FMN1Q68DA7 1419 aa13.69□□□□□ -0.22
TRAPPC2-201ENST00000359680 CADPSQ9ULU8 1353 aa13.69□□□□□ -0.22
TRAPPC2-201ENST00000359680 PTPRKQ15262 1439 aa13.69□□□□□ -0.22
TRAPPC2-201ENST00000359680 WASHC2AQ641Q2 1341 aa13.68□□□□□ -0.22
TRAPPC2-201ENST00000359680 NAIPQ13075 1403 aa13.68□□□□□ -0.22
TRAPPC2-201ENST00000359680 HSPA5P11021 654 aaKnown RBP13.68□□□□□ -0.22
TRAPPC2-201ENST00000359680 KDM5BQ9UGL1 1544 aa13.67□□□□□ -0.22
TRAPPC2-201ENST00000359680 CTTNBP2Q8WZ74 1663 aa13.67□□□□□ -0.22
TRAPPC2-201ENST00000359680 EIF4G2P78344 907 aaKnown RBP eCLIP13.65□□□□□ -0.22
TRAPPC2-201ENST00000359680 CNTLNQ9NXG0 1405 aa13.65□□□□□ -0.22
TRAPPC2-201ENST00000359680 MYOM3Q5VTT5 1437 aa13.64□□□□□ -0.23
TRAPPC2-201ENST00000359680 NCOA2Q15596 1464 aa13.63□□□□□ -0.23
TRAPPC2-201ENST00000359680 SNAPC4Q5SXM2 1469 aa13.63□□□□□ -0.23
TRAPPC2-201ENST00000359680 CC2D2AQ9P2K1 1620 aa13.63□□□□□ -0.23
TRAPPC2-201ENST00000359680 CUL7Q14999 1698 aa13.63□□□□□ -0.23
TRAPPC2-201ENST00000359680 FAM9BQ8IZU0 186 aa13.62□□□□□ -0.23
TRAPPC2-201ENST00000359680 B4GALNT3Q6L9W6 998 aa13.62□□□□□ -0.23
TRAPPC2-201ENST00000359680 SUPT6HQ7KZ85 1726 aaKnown RBP13.62□□□□□ -0.23
TRAPPC2-201ENST00000359680 CCDC184Q52MB2 194 aa13.61□□□□□ -0.23
TRAPPC2-201ENST00000359680 MRS2Q9HD23 443 aa13.61□□□□□ -0.23
TRAPPC2-201ENST00000359680 ZBED9Q6R2W3 1325 aa13.61□□□□□ -0.23
TRAPPC2-201ENST00000359680 ABCA10Q8WWZ4 1543 aa13.6□□□□□ -0.23
TRAPPC2-201ENST00000359680 RAD54L2Q9Y4B4 1467 aa13.59□□□□□ -0.23
TRAPPC2-201ENST00000359680 PRKRIP1Q9H875 184 aaPredicted RBP13.59□□□□□ -0.23
TRAPPC2-201ENST00000359680 HECW1Q76N89 1606 aa13.59□□□□□ -0.23
TRAPPC2-201ENST00000359680 RRP7BPQ9NSQ0 103 aa13.58□□□□□ -0.24
TRAPPC2-201ENST00000359680 DEKP35659 375 aaKnown RBP13.58□□□□□ -0.24
TRAPPC2-201ENST00000359680 EHBP1L1Q8N3D4 1523 aa13.58□□□□□ -0.24
TRAPPC2-201ENST00000359680 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
TRAPPC2-201ENST00000359680 FANCD2Q9BXW9 1451 aa13.58□□□□□ -0.24
TRAPPC2-201ENST00000359680 DNMBPQ6XZF7 1577 aa13.57□□□□□ -0.24
TRAPPC2-201ENST00000359680 SENP3Q9H4L4 574 aaPredicted RBP13.57□□□□□ -0.24
TRAPPC2-201ENST00000359680 CCDC7Q96M83 1385 aa13.57□□□□□ -0.24
TRAPPC2-201ENST00000359680 GCC2Q8IWJ2 1684 aa13.57□□□□□ -0.24
TRAPPC2-201ENST00000359680 NOP58Q9Y2X3 529 aaKnown RBP13.56□□□□□ -0.24
TRAPPC2-201ENST00000359680 THOC2Q8NI27 1593 aaKnown RBP13.56□□□□□ -0.24
TRAPPC2-201ENST00000359680 NCOA1Q15788 1441 aa13.56□□□□□ -0.24
TRAPPC2-201ENST00000359680 CHIC2Q9UKJ5 165 aa13.55□□□□□ -0.24
TRAPPC2-201ENST00000359680 POLA1P09884 1462 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC2-201ENST00000359680 SAMD9Q5K651 1589 aa13.54□□□□□ -0.24
TRAPPC2-201ENST00000359680 GRIN2BQ13224 1484 aa13.54□□□□□ -0.24
TRAPPC2-201ENST00000359680 UGGT2Q9NYU1 1516 aa13.54□□□□□ -0.24
TRAPPC2-201ENST00000359680 L3MBTL2Q969R5 705 aa13.53□□□□□ -0.24
TRAPPC2-201ENST00000359680 DENND4BO75064 1496 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC2-201ENST00000359680 TOPBP1Q92547 1522 aa13.52□□□□□ -0.24
TRAPPC2-201ENST00000359680 C11orf95C9JLR9 678 aaPredicted RBP13.52□□□□□ -0.24
TRAPPC2-201ENST00000359680 AKNAQ7Z591 1439 aa13.51□□□□□ -0.25
TRAPPC2-201ENST00000359680 MPHOSPH9Q99550 1183 aa13.51□□□□□ -0.25
TRAPPC2-201ENST00000359680 NBR1Q14596 966 aa13.5□□□□□ -0.25
TRAPPC2-201ENST00000359680 TCOF1Q13428 1488 aaKnown RBP13.5□□□□□ -0.25
TRAPPC2-201ENST00000359680 ARHGEF11O15085 1522 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms